Os05g0480700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit).
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Os05g0480700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 123.43 | 0.522 | 2.83 | -0.0776 | 0.242 | -0.161 | 2.07 | -1.71 | 0.205 | 12.4 | 1.11 | 77 | -- | -- |
| 124.4 | 0.519 | 2.83 | 0.0114 | 0.206 | -0.191 | 0.183 | -- | 0.206 | 12.3 | 19 | 2 | -- | -- |
| 125.58 | 0.522 | 2.83 | -0.000499 | 0.183 | -0.112 | -- | -0.0759 | 0.202 | 13 | 1.032 | 58 | -- | -- |
| 124.53 | 0.52 | 2.83 | 0.0149 | 0.208 | -0.196 | -- | -- | 0.205 | 12.4 | 19.02 | 3 | -- | -- |
| 126.15 | 0.523 | 2.84 | 0.0139 | -- | 0.017 | -- | -0.0673 | 0.206 | -- | 4.81 | 53 | -- | -- |
| 125.97 | 0.526 | 2.84 | 0.00689 | 0.0476 | -- | 0.158 | -- | 0.212 | 12.6 | -- | -- | -- | -- |
| 126.07 | 0.526 | 2.83 | 0.013 | 0.0475 | -- | -- | -- | 0.212 | 13 | -- | -- | -- | -- |
| 125.86 | 0.525 | 2.84 | 0.0127 | -- | -0.0631 | -- | -- | 0.209 | -- | 19.02 | 3 | -- | -- |
| 124.54 | 0.52 | 2.83 | -- | 0.208 | -0.196 | -- | -- | 0.205 | 12.4 | 19.04 | 3 | -- | -- |
| 126.21 | 0.525 | 2.84 | 0.0112 | -- | -- | -- | -- | 0.211 | -- | -- | -- | -- | -- |
| 126.08 | 0.525 | 2.84 | -- | 0.0473 | -- | -- | -- | 0.211 | 13 | -- | -- | -- | -- |
| 125.85 | 0.522 | 2.84 | -- | -- | -0.0654 | -- | -- | 0.207 | -- | 19.24 | 2 | -- | -- |
| 126.22 | 0.524 | 2.84 | -- | -- | -- | -- | -- | 0.21 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 116.41 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 2 |
| 5 | 116.51 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 7 | 1 |
| 11 | 116.51 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 7 | 7 |
| 19 | 116.51 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 7 | 1 |
| 25 | 116.51 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 7 | 7 |
| 33 | 116.52 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 3 |
| 53 | 116.52 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 57 | 116.52 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 7 | 5 |
| 83 | 116.55 | radiation | 1.0 | 90 | < th | dose independent | rect. | 7 | 8 |
| 84 | 116.55 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 7 | 1 |
| 109 | 116.56 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 7 | 8 |
| 133 | 116.60 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 7 | 1 |
| 170 | 116.60 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 293 | 120.28 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 358 | 121.22 | temperature | 25.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 359 | 121.22 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 362 | 121.22 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 365 | 121.22 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 366 | 121.22 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 369 | 121.22 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 370 | 121.23 | radiation | 10.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 396 | 121.23 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 423 | 121.25 | radiation | 10.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 424 | 121.26 | humidity | 80.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 439 | 121.31 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 441 | 121.33 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 451 | 121.39 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 458 | 121.42 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 11 | 3 |
| 467 | 121.51 | wind | 3.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 476 | 121.53 | humidity | 90.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 488 | 121.62 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 503 | 121.72 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 504 | 121.72 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 526 | 121.76 | atmosphere | 995.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 559 | 121.85 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 5 | 5 |
| 560 | 121.87 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 572 | 121.90 | temperature | 25.0 | 720 | > th | dose independent | rect. | 23 | 1 |
| 575 | 121.92 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 3 | 11 |
| 599 | 121.98 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 5 | 9 |
| 604 | 121.99 | humidity | 70.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 605 | 121.99 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 606 | 121.99 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 1 | 13 |
| 613 | 122.00 | wind | 5.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 614 | 122.00 | radiation | 30.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 619 | 122.01 | temperature | 10.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 622 | 122.01 | temperature | 30.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 623 | 122.01 | humidity | 50.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 625 | 122.01 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 627 | 122.01 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 630 | 122.01 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 8 | 1 |
| 639 | 122.01 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 640 | 122.01 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 643 | 122.02 | wind | 9.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 650 | 122.05 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 672 | 122.07 | wind | 1.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 714 | 122.12 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 716 | 122.14 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 9 | 7 |
| 736 | 122.21 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 738 | 122.24 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 22 | 6 |
| 747 | 122.28 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 9 | 11 |
| 788 | 122.39 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 18 | 15 |
| 789 | 122.42 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 790 | 122.42 | radiation | 1.0 | 90 | < th | dose independent | rect. | 6 | 13 |
| 791 | 122.42 | wind | 3.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 839 | 122.52 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 843 | 122.54 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 845 | 122.55 | radiation | 10.0 | 30 | < th | dose independent | sin | 10 | NA |
| 854 | 122.56 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 885 | 122.64 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 888 | 122.65 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 23 | 1 |
| 889 | 122.66 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 23 | 2 |
| 890 | 122.66 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 14 | 6 |
| 891 | 122.67 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 924 | 122.79 | temperature | 25.0 | 10 | > th | dose independent | rect. | 6 | 3 |
| 940 | 122.81 | humidity | 70.0 | 30 | > th | dose independent | rect. | 18 | 1 |
| 942 | 122.81 | radiation | 10.0 | 30 | < th | dose dependent | sin | 9 | NA |
| 960 | 122.84 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 18 | 1 |
| 974 | 122.88 | temperature | 30.0 | 30 | < th | dose independent | rect. | 18 | 1 |
| 976 | 122.88 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 12 | 8 |
| 987 | 122.89 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 18 | 1 |
| 994 | 122.90 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 20 | 8 |