Os05g0479800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Disease resistance protein family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0479800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Disease resistance protein family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.1 | 0.415 | 8.26 | 2.09 | 0.916 | 8.5 | -1.08 | 22.7 | 0.489 | 21.8 | 15.1 | 1253 | -- | -- |
| 83.08 | 0.428 | 8.14 | 1.97 | 0.926 | -2.1 | -1.18 | -- | 0.522 | 22 | 15.1 | 1253 | -- | -- |
| 81.96 | 0.422 | 8.26 | 2.16 | 0.904 | 8.86 | -- | 23.1 | 0.494 | 21.8 | 15.21 | 992 | -- | -- |
| 80.9 | 0.419 | 8.14 | 1.86 | 0.873 | -1.74 | -- | -- | 0.474 | 21.7 | 17.4 | 1000 | -- | -- |
| 130.78 | 0.533 | 8.24 | 2.16 | -- | 8.9 | -- | 23.1 | 0.493 | -- | 15.3 | 975 | -- | -- |
| 91.32 | 0.448 | 8.13 | 2.06 | 0.898 | -- | -0.948 | -- | 0.544 | 21.9 | -- | -- | -- | -- |
| 94.79 | 0.456 | 8.13 | 2.1 | 0.903 | -- | -- | -- | 0.546 | 21.9 | -- | -- | -- | -- |
| 122.26 | 0.515 | 8.13 | 1.81 | -- | -1.7 | -- | -- | 0.438 | -- | 19.65 | 776 | -- | -- |
| 118.28 | 0.507 | 8.26 | -- | 0.884 | -1.62 | -- | -- | 0.0144 | 21.6 | 19.63 | 47123 | -- | -- |
| 143.57 | 0.56 | 8.11 | 2.11 | -- | -- | -- | -- | 0.546 | -- | -- | -- | -- | -- |
| 210.65 | 0.679 | 8.18 | -- | 0.91 | -- | -- | -- | 0.312 | 22 | -- | -- | -- | -- |
| 164.86 | 0.598 | 8.23 | -- | -- | -1.68 | -- | -- | -0.0153 | -- | 19.75 | 47024 | -- | -- |
| 260.6 | 0.754 | 8.16 | -- | -- | -- | -- | -- | 0.312 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.61 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 2 | 72.61 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 5 |
| 3 | 72.79 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 5 | 72.79 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 3 |
| 13 | 73.72 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 37 | 74.94 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 57 | 75.73 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 61 | 75.82 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 70 | 75.95 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 77 | 76.12 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 95 | 76.48 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 119 | 76.95 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 130 | 77.07 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 8 | 7 |
| 132 | 77.11 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 135 | 77.13 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 7 |
| 137 | 77.14 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 24 | 5 |
| 141 | 77.16 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 145 | 77.17 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 148 | 77.19 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 24 | 6 |
| 171 | 77.32 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 173 | 77.34 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 181 | 77.38 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 6 |
| 201 | 77.49 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 4 | 16 |
| 230 | 77.66 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 8 | 3 |
| 233 | 77.71 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 238 | 77.74 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 4 | 6 |
| 243 | 77.76 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 4 | 6 |
| 244 | 77.77 | temperature | 20.0 | 720 | < th | dose dependent | sin | 23 | NA |
| 246 | 77.79 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 16 | 14 |
| 249 | 77.82 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 252 | 77.82 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 14 | 16 |
| 263 | 77.85 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 9 | 6 |
| 274 | 77.91 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 11 | 2 |
| 278 | 77.92 | temperature | 15.0 | 720 | > th | dose independent | rect. | 12 | 18 |
| 280 | 77.93 | temperature | 15.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 305 | 78.01 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 308 | 78.02 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 4 | 21 |
| 313 | 78.03 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 321 | 78.05 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 6 | 19 |
| 323 | 78.05 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 4 | 3 |
| 327 | 78.06 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 12 | 20 |
| 328 | 78.06 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 8 | 10 |
| 329 | 78.07 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 8 | 4 |
| 334 | 78.08 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 338 | 78.10 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 340 | 78.10 | temperature | 15.0 | 1440 | < th | dose dependent | sin | 2 | NA |
| 342 | 78.11 | temperature | 15.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 343 | 78.11 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 347 | 78.11 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 6 | 21 |
| 358 | 78.13 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 370 | 78.15 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 377 | 78.17 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 4 | 23 |
| 379 | 78.17 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 4 |
| 386 | 78.18 | temperature | 15.0 | 1440 | < th | dose independent | no | NA | NA |
| 393 | 78.18 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 394 | 78.18 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 17 | 22 |
| 401 | 78.18 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 12 | 23 |
| 406 | 78.18 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 7 | 12 |
| 410 | 78.19 | temperature | 15.0 | 1440 | > th | dose independent | no | NA | NA |
| 421 | 78.19 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 17 | 22 |
| 426 | 78.19 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 23 |
| 427 | 78.19 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 7 | 23 |
| 431 | 78.19 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 6 | 23 |
| 438 | 78.20 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 1 | 20 |
| 454 | 78.21 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 13 | 18 |
| 479 | 78.22 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 495 | 78.22 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 23 | 23 |
| 498 | 78.22 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 1 | 9 |
| 518 | 78.23 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 1 | 5 |
| 523 | 78.24 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 4 | 12 |
| 526 | 78.24 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 17 | 18 |
| 534 | 78.24 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 20 | 18 |
| 542 | 78.25 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 545 | 78.25 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 17 | 13 |
| 571 | 78.25 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 20 | 15 |
| 575 | 78.26 | temperature | 15.0 | 1440 | < th | dose independent | sin | 13 | NA |
| 576 | 78.26 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 577 | 78.26 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 7 | 6 |
| 585 | 78.26 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 587 | 78.26 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 7 | 6 |
| 607 | 78.27 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 17 | 14 |
| 614 | 78.28 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 3 | 4 |
| 625 | 78.28 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 629 | 78.28 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 20 | 11 |
| 655 | 78.29 | temperature | 15.0 | 1440 | < th | dose dependent | sin | 9 | NA |
| 658 | 78.29 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 21 | 9 |
| 685 | 78.31 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 6 | 10 |
| 716 | 78.33 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 22 | 6 |
| 721 | 78.34 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 730 | 78.34 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 736 | 78.35 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 21 | 5 |
| 737 | 78.35 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 8 |
| 759 | 78.37 | temperature | 15.0 | 1440 | > th | dose independent | sin | 14 | NA |
| 818 | 78.40 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 8 |
| 825 | 78.41 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 7 | 8 |
| 826 | 78.41 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 4 | 10 |
| 843 | 78.42 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 4 | 9 |
| 865 | 78.44 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 23 | 3 |
| 895 | 78.46 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 18 |
| 903 | 78.47 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 17 | 3 |
| 913 | 78.48 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 2 | 14 |
| 942 | 78.50 | temperature | 15.0 | 1440 | < th | dose dependent | no | NA | NA |
| 954 | 78.50 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 9 | 22 |
| 986 | 78.52 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 9 | 2 |