Os05g0477300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ribosomal protein S26E family protein.
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Os05g0477300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ribosomal protein S26E family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.54 | 0.389 | 13.7 | 0.497 | 0.848 | 0.608 | 0.67 | -0.913 | 0.0751 | 18 | 20.2 | 4142 | -- | -- |
| 69 | 0.387 | 13.7 | 0.652 | 0.844 | 0.777 | 0.591 | -- | 0.119 | 17.8 | 19.8 | 2759 | -- | -- |
| 69.63 | 0.389 | 13.7 | 0.501 | 0.849 | 0.606 | -- | -0.92 | 0.0822 | 17.9 | 20.2 | 4141 | -- | -- |
| 69.92 | 0.389 | 13.7 | 0.683 | 0.854 | 0.806 | -- | -- | 0.133 | 17.8 | 19.89 | 2759 | -- | -- |
| 106.4 | 0.48 | 13.7 | 0.511 | -- | 0.555 | -- | -0.974 | 0.0833 | -- | 20.6 | 3434 | -- | -- |
| 80.65 | 0.421 | 13.7 | 1.12 | 0.828 | -- | 0.796 | -- | 0.326 | 18.1 | -- | -- | -- | -- |
| 82.19 | 0.425 | 13.7 | 1.11 | 0.832 | -- | -- | -- | 0.329 | 18 | -- | -- | -- | -- |
| 106.64 | 0.481 | 13.7 | 0.73 | -- | 0.764 | -- | -- | 0.111 | -- | 20.2 | 1995 | -- | -- |
| 73.16 | 0.398 | 13.7 | -- | 0.844 | 1.03 | -- | -- | -0.0506 | 17.8 | 19.49 | 21512 | -- | -- |
| 118.1 | 0.508 | 13.6 | 1.09 | -- | -- | -- | -- | 0.31 | -- | -- | -- | -- | -- |
| 114.64 | 0.501 | 13.7 | -- | 0.816 | -- | -- | -- | 0.205 | 18 | -- | -- | -- | -- |
| 109.04 | 0.486 | 13.7 | -- | -- | 1.07 | -- | -- | -0.0484 | -- | 19.2 | 21759 | -- | -- |
| 149.16 | 0.57 | 13.7 | -- | -- | -- | -- | -- | 0.19 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.51 | temperature | 20 | 270 | > th | dose dependent | rect. | 7 | 5 |
| 2 | 63.51 | temperature | 20 | 90 | > th | dose dependent | rect. | 8 | 7 |
| 5 | 63.86 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 6 |
| 9 | 63.98 | temperature | 20 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 10 | 64.10 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 17 | 64.48 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 15 |
| 57 | 65.36 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 19 |
| 59 | 65.37 | temperature | 25 | 270 | > th | dose dependent | rect. | 19 | 17 |
| 199 | 66.51 | temperature | 10 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 239 | 66.87 | temperature | 25 | 270 | > th | dose independent | rect. | 8 | 4 |
| 253 | 66.91 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 16 |
| 289 | 67.14 | temperature | 25 | 90 | > th | dose dependent | sin | 4 | NA |
| 298 | 67.20 | temperature | 25 | 270 | > th | dose dependent | sin | 8 | NA |
| 303 | 67.22 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 10 |
| 308 | 67.24 | temperature | 20 | 4320 | < th | dose independent | rect. | 16 | 10 |
| 344 | 67.35 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 399 | 67.50 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 402 | 67.51 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 440 | 67.62 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 451 | 67.64 | temperature | 20 | 4320 | < th | dose independent | sin | 15 | NA |
| 473 | 67.69 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 568 | 67.87 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 9 |
| 666 | 68.07 | temperature | 20 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 678 | 68.09 | temperature | 10 | 90 | > th | dose dependent | sin | 2 | NA |
| 727 | 68.17 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 856 | 68.37 | temperature | 20 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 927 | 68.49 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 2 |
| 941 | 68.50 | temperature | 30 | 90 | < th | dose dependent | sin | 1 | NA |