Os05g0477100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0477100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.04 | 0.345 | 3.01 | -0.0822 | 0.0558 | -0.118 | 0.13 | 1.25 | 0.109 | 12.5 | 59.29 | 1566 | -- | -- |
| 56.69 | 0.353 | 2.99 | -0.034 | 0.0392 | -0.102 | 0.14 | -- | 0.0915 | 11 | 58.7 | 2958 | -- | -- |
| 54.11 | 0.343 | 3.01 | -0.077 | 0.056 | -0.116 | -- | 1.25 | 0.11 | 12.9 | 59.46 | 1565 | -- | -- |
| 56.71 | 0.353 | 2.99 | -0.0269 | 0.0389 | -0.114 | -- | -- | 0.0925 | 11.9 | 57.51 | 5079 | -- | -- |
| 54.3 | 0.343 | 3.01 | -0.0777 | -- | -0.116 | -- | 1.26 | 0.11 | -- | 59.74 | 1565 | -- | -- |
| 56.98 | 0.354 | 2.99 | -0.0304 | 0.0607 | -- | 0.129 | -- | 0.0815 | 12.5 | -- | -- | -- | -- |
| 57.05 | 0.354 | 2.99 | -0.0253 | 0.061 | -- | -- | -- | 0.0823 | 13 | -- | -- | -- | -- |
| 56.79 | 0.353 | 2.99 | -0.0281 | -- | -0.129 | -- | -- | 0.0934 | -- | 57.51 | 5079 | -- | -- |
| 56.72 | 0.353 | 2.99 | -- | 0.0393 | -0.114 | -- | -- | 0.0955 | 12 | 57.51 | 5079 | -- | -- |
| 57.28 | 0.354 | 2.99 | -0.0276 | -- | -- | -- | -- | 0.0811 | -- | -- | -- | -- | -- |
| 57.07 | 0.353 | 2.99 | -- | 0.0614 | -- | -- | -- | 0.0851 | 13 | -- | -- | -- | -- |
| 56.81 | 0.352 | 2.99 | -- | -- | -0.128 | -- | -- | 0.0965 | -- | 57.51 | 5079 | -- | -- |
| 57.3 | 0.353 | 2.99 | -- | -- | -- | -- | -- | 0.0841 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.82 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 3 | 48.79 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 7 | 48.84 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 10 | 48.84 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 14 | 48.84 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 20 | 48.84 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 21 | 48.84 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 41 | 48.84 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 44 | 48.88 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 45 | 48.89 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 46 | 48.90 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 49 | 48.92 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 52 | 48.94 | humidity | 80.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 53 | 48.96 | wind | 7.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 58 | 48.98 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 59 | 48.99 | wind | 1.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 62 | 48.99 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 64 | 48.99 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 65 | 48.99 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 69 | 48.99 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 71 | 48.99 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 76 | 48.99 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 77 | 48.99 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 78 | 48.99 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 83 | 48.99 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 84 | 49.00 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 87 | 49.02 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 88 | 49.03 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 90 | 49.05 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 100 | 49.30 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 101 | 49.31 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 106 | 49.59 | wind | 9.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 107 | 49.59 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 119 | 49.98 | wind | 9.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 167 | 52.68 | wind | 9.0 | 43200 | > th | dose dependent | sin | 5 | NA |
| 171 | 52.82 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 21 | 17 |
| 175 | 52.87 | wind | 9.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 176 | 52.87 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 3 | 11 |
| 195 | 52.93 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 22 | 9 |
| 197 | 52.96 | atmosphere | 1010.0 | 30 | > th | dose dependent | sin | 21 | NA |
| 202 | 52.99 | wind | 9.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 205 | 53.00 | atmosphere | 1010.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 277 | 53.04 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 21 | 23 |
| 286 | 53.04 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 19 |
| 287 | 53.04 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 340 | 53.08 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 353 | 53.09 | atmosphere | 1010.0 | 10 | > th | dose dependent | sin | 3 | NA |
| 359 | 53.09 | atmosphere | 1010.0 | 10 | > th | dose dependent | rect. | 24 | 13 |
| 389 | 53.12 | wind | 9.0 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 408 | 53.13 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 428 | 53.14 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 5 | 5 |
| 443 | 53.17 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 468 | 53.18 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 478 | 53.18 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 494 | 53.18 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 16 |
| 503 | 53.19 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 20 | 11 |
| 504 | 53.19 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 23 | 2 |
| 507 | 53.19 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 20 | 11 |
| 508 | 53.19 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 18 | 14 |
| 510 | 53.20 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 526 | 53.21 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 546 | 53.22 | wind | 9.0 | 43200 | < th | dose independent | rect. | 23 | 11 |
| 549 | 53.22 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 17 | 4 |
| 759 | 53.24 | wind | 9.0 | 43200 | > th | dose independent | rect. | 22 | 12 |
| 784 | 53.25 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 18 | 13 |
| 796 | 53.26 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 798 | 53.26 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 11 |
| 803 | 53.26 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 864 | 53.29 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 15 | 20 |
| 865 | 53.29 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 22 | 22 |
| 868 | 53.30 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 971 | 53.32 | wind | 9.0 | 43200 | > th | dose independent | rect. | 1 | 9 |
| 975 | 53.32 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 23 | 13 |
| 993 | 53.33 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 4 | 16 |