Os05g0473500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Exo70 exocyst complex subunit family protein.
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Os05g0473500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Exo70 exocyst complex subunit family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.92 | 0.373 | 11.8 | -0.726 | 1.19 | -0.732 | -0.0761 | -1.05 | -0.367 | 2.57 | 79.96 | 1444 | -- | -- |
| 63.86 | 0.372 | 11.8 | -0.651 | 1.17 | -0.747 | -0.0508 | -- | -0.365 | 2.56 | 79.93 | 1449 | -- | -- |
| 62.94 | 0.369 | 11.8 | -0.724 | 1.19 | -0.735 | -- | -1.05 | -0.366 | 2.56 | 80 | 1444 | -- | -- |
| 63.83 | 0.372 | 11.8 | -0.642 | 1.17 | -0.794 | -- | -- | -0.349 | 2.56 | 79.16 | 1449 | -- | -- |
| 91.87 | 0.449 | 11.8 | -0.6 | -- | -0.73 | -- | -0.319 | -0.354 | -- | 80 | 1444 | -- | -- |
| 71.19 | 0.396 | 11.8 | -0.667 | 1.18 | -- | -0.152 | -- | -0.393 | 2.52 | -- | -- | -- | -- |
| 71.27 | 0.395 | 11.8 | -0.663 | 1.18 | -- | -- | -- | -0.392 | 2.51 | -- | -- | -- | -- |
| 92.54 | 0.45 | 11.8 | -0.589 | -- | -0.73 | -- | -- | -0.351 | -- | 80 | 1444 | -- | -- |
| 73.55 | 0.399 | 11.8 | -- | 1.19 | -0.8 | -- | -- | -0.285 | 2.53 | 77.99 | 1421 | -- | -- |
| 152.86 | 0.578 | 11.8 | -0.613 | -- | -- | -- | -- | -0.363 | -- | -- | -- | -- | -- |
| 82.86 | 0.426 | 11.8 | -- | 1.17 | -- | -- | -- | -0.319 | 2.5 | -- | -- | -- | -- |
| 101.7 | 0.471 | 11.8 | -- | -- | -0.734 | -- | -- | -0.286 | -- | 80 | 1444 | -- | -- |
| 162.78 | 0.596 | 11.8 | -- | -- | -- | -- | -- | -0.295 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.35 | temperature | 25.0 | 90 | < th | dose independent | rect. | 10 | 11 |
| 4 | 60.69 | temperature | 25.0 | 10 | < th | dose independent | rect. | 10 | 12 |
| 6 | 60.82 | temperature | 25.0 | 90 | > th | dose independent | rect. | 8 | 12 |
| 12 | 60.92 | temperature | 25.0 | 90 | > th | dose independent | sin | 22 | NA |
| 21 | 61.08 | temperature | 25.0 | 90 | < th | dose independent | sin | 21 | NA |
| 29 | 61.17 | temperature | 25.0 | 10 | < th | dose independent | sin | 20 | NA |
| 35 | 61.41 | temperature | 25.0 | 10 | > th | dose independent | rect. | 8 | 13 |
| 38 | 61.47 | temperature | 25.0 | 10 | > th | dose independent | sin | 21 | NA |
| 42 | 61.54 | temperature | 25.0 | 10 | < th | dose independent | rect. | 8 | 14 |
| 97 | 62.33 | temperature | 25.0 | 90 | > th | dose independent | rect. | 8 | 17 |
| 107 | 62.51 | temperature | 25.0 | 10 | > th | dose independent | rect. | 11 | 10 |
| 108 | 62.51 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 21 |
| 115 | 62.59 | temperature | 25.0 | 10 | < th | dose independent | rect. | 6 | 16 |
| 122 | 62.65 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 5 | 13 |
| 128 | 62.68 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 12 | 22 |
| 131 | 62.69 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 21 |
| 136 | 62.71 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 19 | 23 |
| 143 | 62.73 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 19 | 23 |
| 144 | 62.75 | humidity | 80.0 | 720 | > th | dose independent | rect. | 8 | 14 |
| 152 | 62.76 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 20 |
| 156 | 62.77 | humidity | 80.0 | 720 | > th | dose independent | sin | 19 | NA |
| 158 | 62.77 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 12 | 22 |
| 182 | 62.81 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 19 | 23 |
| 191 | 62.86 | humidity | 80.0 | 1440 | < th | dose independent | sin | 21 | NA |
| 198 | 62.87 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 14 | 14 |
| 200 | 62.87 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 223 | 62.90 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 2 | 17 |
| 235 | 62.91 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 8 | 20 |
| 241 | 62.92 | humidity | 80.0 | 1440 | < th | dose independent | no | NA | NA |
| 271 | 62.94 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 275 | 62.95 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 12 |
| 280 | 62.96 | humidity | 80.0 | 720 | > th | dose independent | rect. | 12 | 9 |
| 295 | 62.97 | temperature | 25.0 | 10 | > th | dose independent | rect. | 8 | 18 |
| 314 | 62.99 | humidity | 80.0 | 720 | > th | dose independent | rect. | 14 | 7 |
| 346 | 63.02 | humidity | 80.0 | 1440 | > th | dose independent | no | NA | NA |
| 347 | 63.02 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 12 | 2 |
| 352 | 63.02 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 17 |
| 359 | 63.02 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 386 | 63.05 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 397 | 63.06 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 12 | 2 |
| 403 | 63.06 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 14 | 18 |
| 486 | 63.12 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 531 | 63.16 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 17 | 1 |
| 541 | 63.17 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 15 | 6 |
| 566 | 63.19 | humidity | 70.0 | 720 | > th | dose dependent | sin | 19 | NA |
| 588 | 63.22 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 596 | 63.23 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 2 | 23 |
| 604 | 63.24 | temperature | 25.0 | 90 | > th | dose independent | rect. | 23 | 22 |
| 616 | 63.25 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 2 | 20 |
| 702 | 63.36 | precipitation | 0.1 | 90 | > th | dose independent | no | NA | NA |
| 703 | 63.36 | precipitation | 0.1 | 90 | < th | dose independent | no | NA | NA |
| 714 | 63.36 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 5 | 23 |
| 715 | 63.36 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 7 | 23 |
| 720 | 63.36 | precipitation | 0.1 | 90 | < th | dose dependent | no | NA | NA |
| 730 | 63.37 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 23 | 23 |
| 803 | 63.45 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 12 | 2 |
| 819 | 63.48 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 9 | 13 |
| 931 | 63.59 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 8 | 10 |
| 932 | 63.59 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 963 | 63.63 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 14 | 17 |
| 973 | 63.64 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 10 | 8 |
| 975 | 63.64 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 14 | 15 |