Os05g0472200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF248, methyltransferase putative family protein.
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Os05g0472200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF248, methyltransferase putative family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.74 | 0.252 | 7.15 | 0.123 | 0.243 | -0.0404 | 0.0756 | -1.17 | 0.0307 | 23.1 | 23.7 | 1341 | -- | -- |
| 31.05 | 0.26 | 7.2 | -0.315 | 0.268 | -0.14 | 0.0908 | -- | -0.101 | 23 | 24.6 | 1377 | -- | -- |
| 28.77 | 0.25 | 7.15 | 0.123 | 0.243 | -0.0395 | -- | -1.18 | 0.031 | 23.1 | 23.78 | 1336 | -- | -- |
| 31.06 | 0.26 | 7.2 | -0.321 | 0.238 | -0.144 | -- | -- | -0.115 | 22.9 | 24.6 | 1262 | -- | -- |
| 32.3 | 0.265 | 7.15 | 0.0631 | -- | -0.0931 | -- | -1.08 | 0.000277 | -- | 24 | 1154 | -- | -- |
| 31.72 | 0.264 | 7.19 | -0.281 | 0.249 | -- | 0.154 | -- | -0.062 | 23.2 | -- | -- | -- | -- |
| 31.82 | 0.264 | 7.19 | -0.287 | 0.248 | -- | -- | -- | -0.0626 | 23.3 | -- | -- | -- | -- |
| 33.12 | 0.268 | 7.21 | -0.363 | -- | -0.234 | -- | -- | -0.165 | -- | 24.71 | 724 | -- | -- |
| 33.82 | 0.271 | 7.18 | -- | 0.273 | 0.0738 | -- | -- | -0.0172 | 23 | 26.4 | 801 | -- | -- |
| 35.68 | 0.279 | 7.18 | -0.281 | -- | -- | -- | -- | -0.0603 | -- | -- | -- | -- | -- |
| 34 | 0.273 | 7.18 | -- | 0.245 | -- | -- | -- | -0.0306 | 23.2 | -- | -- | -- | -- |
| 36.27 | 0.28 | 7.19 | -- | -- | -0.167 | -- | -- | -0.0996 | -- | 24.7 | 758 | -- | -- |
| 37.76 | 0.287 | 7.18 | -- | -- | -- | -- | -- | -0.0291 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.00 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 2 | 28.01 | wind | 1.0 | 43200 | > th | dose independent | rect. | 16 | 13 |
| 4 | 28.03 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 17 | 28.08 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 53 | 28.29 | wind | 1.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 54 | 28.30 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 20 |
| 55 | 28.31 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 20 |
| 56 | 28.32 | wind | 1.0 | 43200 | < th | dose independent | rect. | 15 | 14 |
| 63 | 28.36 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 20 |
| 72 | 28.41 | wind | 9.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 73 | 28.41 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 3 |
| 77 | 28.42 | wind | 1.0 | 43200 | < th | dose independent | sin | 15 | NA |
| 87 | 28.45 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 88 | 28.45 | wind | 1.0 | 14400 | > th | dose independent | rect. | 19 | 17 |
| 105 | 28.49 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 8 |
| 111 | 28.51 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 114 | 28.51 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 11 | NA |
| 119 | 28.52 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 8 |
| 148 | 28.59 | wind | 1.0 | 14400 | < th | dose independent | rect. | 19 | 18 |
| 152 | 28.59 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 156 | 28.60 | wind | 1.0 | 14400 | < th | dose independent | rect. | 17 | 19 |
| 214 | 28.68 | wind | 1.0 | 14400 | > th | dose independent | rect. | 8 | 23 |
| 256 | 28.74 | wind | 7.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 267 | 28.75 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 2 | 1 |
| 270 | 28.75 | wind | 1.0 | 14400 | < th | dose independent | rect. | 9 | 22 |
| 276 | 28.75 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 16 | 16 |
| 296 | 28.79 | wind | 1.0 | 14400 | > th | dose independent | no | NA | NA |
| 320 | 28.81 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 16 | 11 |
| 321 | 28.81 | wind | 9.0 | 4320 | < th | dose independent | rect. | 18 | 16 |
| 333 | 28.83 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 343 | 28.83 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 20 | 14 |
| 358 | 28.85 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 14 |
| 364 | 28.85 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 374 | 28.86 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 15 | 20 |
| 376 | 28.86 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 9 | 22 |
| 377 | 28.87 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 6 |
| 378 | 28.87 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 16 | 9 |
| 394 | 28.88 | wind | 1.0 | 14400 | < th | dose independent | no | NA | NA |
| 395 | 28.88 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 397 | 28.88 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 22 | 5 |
| 408 | 28.89 | wind | 7.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 411 | 28.89 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 14 |
| 420 | 28.90 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 10 |
| 431 | 28.91 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 435 | 28.91 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 19 | 18 |
| 453 | 28.92 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 23 | 2 |
| 498 | 28.94 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 20 | 15 |
| 505 | 28.95 | temperature | 25.0 | 1440 | < th | dose independent | sin | 14 | NA |
| 526 | 28.95 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 17 | 23 |
| 528 | 28.96 | wind | 3.0 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 531 | 28.96 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 16 | 8 |
| 570 | 28.98 | wind | 1.0 | 14400 | < th | dose independent | rect. | 20 | 5 |
| 583 | 28.98 | wind | 1.0 | 14400 | < th | dose dependent | no | NA | NA |
| 594 | 28.99 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 595 | 28.99 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 23 | 2 |
| 598 | 28.99 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 8 |
| 615 | 28.99 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 23 |
| 629 | 29.00 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 6 |
| 630 | 29.00 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 12 |
| 658 | 29.02 | wind | 3.0 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 660 | 29.02 | wind | 9.0 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 715 | 29.04 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 741 | 29.05 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 742 | 29.05 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 4 |
| 751 | 29.05 | wind | 1.0 | 14400 | < th | dose dependent | sin | 14 | NA |
| 773 | 29.06 | wind | 3.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 774 | 29.06 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 800 | 29.06 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 15 | 16 |
| 826 | 29.07 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 16 | 21 |
| 866 | 29.08 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 20 | 3 |
| 886 | 29.09 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 17 |
| 931 | 29.10 | wind | 3.0 | 14400 | < th | dose dependent | sin | 11 | NA |
| 961 | 29.11 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 9 | 21 |
| 967 | 29.11 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 16 | 12 |
| 979 | 29.12 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |