Os05g0468500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lipolytic enzyme, G-D-S-L family protein.
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Os05g0468500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lipolytic enzyme, G-D-S-L family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 135.18 | 0.546 | 8.56 | -0.964 | 1.48 | -0.798 | 0.939 | 0.105 | -0.513 | 9.69 | 73 | 1233 | -- | -- |
| 135.2 | 0.542 | 8.55 | -0.948 | 1.48 | -0.793 | 0.955 | -- | -0.508 | 9.69 | 72.95 | 1233 | -- | -- |
| 138.28 | 0.548 | 8.56 | -0.976 | 1.51 | -0.811 | -- | 0.458 | -0.523 | 9.68 | 72.38 | 1200 | -- | -- |
| 138.64 | 0.548 | 8.55 | -0.913 | 1.46 | -0.77 | -- | -- | -0.512 | 9.65 | 73 | 1251 | -- | -- |
| 245.41 | 0.73 | 8.6 | -0.937 | -- | -0.795 | -- | 0.183 | -0.507 | -- | 72.91 | 1481 | -- | -- |
| 156.37 | 0.586 | 8.53 | -0.79 | 1.37 | -- | 0.838 | -- | -0.407 | 9.31 | -- | -- | -- | -- |
| 158.89 | 0.59 | 8.53 | -0.76 | 1.37 | -- | -- | -- | -0.407 | 9.28 | -- | -- | -- | -- |
| 245.48 | 0.73 | 8.59 | -0.909 | -- | -0.787 | -- | -- | -0.499 | -- | 72.87 | 1483 | -- | -- |
| 158.71 | 0.587 | 8.53 | -- | 1.43 | -0.716 | -- | -- | -0.403 | 9.64 | 74 | 1272 | -- | -- |
| 267.7 | 0.765 | 8.57 | -0.766 | -- | -- | -- | -- | -0.401 | -- | -- | -- | -- | -- |
| 174.1 | 0.617 | 8.51 | -- | 1.37 | -- | -- | -- | -0.322 | 9.32 | -- | -- | -- | -- |
| 266.14 | 0.76 | 8.57 | -- | -- | -0.697 | -- | -- | -0.396 | -- | 74.58 | 1476 | -- | -- |
| 283.16 | 0.785 | 8.55 | -- | -- | -- | -- | -- | -0.316 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 133.67 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 2 | 134.85 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 4 | 135.32 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 5 | 135.37 | humidity | 80 | 1440 | < th | dose dependent | rect. | 19 | 18 |
| 9 | 135.55 | radiation | 20 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 20 | 135.97 | radiation | 40 | 1440 | > th | dose dependent | rect. | 14 | 22 |
| 28 | 136.19 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 32 | 136.26 | humidity | 70 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 34 | 136.29 | radiation | 10 | 1440 | < th | dose independent | rect. | 11 | 7 |
| 35 | 136.30 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 21 |
| 38 | 136.36 | humidity | 80 | 1440 | < th | dose dependent | rect. | 10 | 3 |
| 40 | 136.44 | humidity | 80 | 1440 | < th | dose dependent | sin | 8 | NA |
| 45 | 136.54 | humidity | 80 | 1440 | < th | dose dependent | rect. | 23 | 14 |
| 55 | 136.63 | radiation | 10 | 1440 | < th | dose independent | rect. | 13 | 5 |
| 62 | 136.70 | radiation | 40 | 1440 | > th | dose dependent | rect. | 8 | 4 |
| 85 | 136.75 | radiation | 40 | 1440 | > th | dose dependent | rect. | 10 | 2 |
| 91 | 136.79 | radiation | 10 | 1440 | < th | dose independent | rect. | 11 | 12 |
| 93 | 136.80 | radiation | 10 | 1440 | < th | dose independent | rect. | 11 | 17 |
| 100 | 136.81 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 121 | 136.92 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 12 |
| 134 | 136.98 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 15 |
| 153 | 137.11 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 217 | 137.17 | radiation | 10 | 1440 | < th | dose independent | sin | 17 | NA |
| 227 | 137.22 | radiation | 10 | 1440 | < th | dose independent | rect. | 13 | 10 |
| 235 | 137.24 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 237 | 137.24 | radiation | 10 | 1440 | < th | dose independent | rect. | 13 | 12 |
| 238 | 137.24 | radiation | 10 | 1440 | < th | dose independent | rect. | 13 | 14 |
| 284 | 137.39 | radiation | 40 | 1440 | > th | dose dependent | sin | 11 | NA |
| 286 | 137.39 | humidity | 80 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 287 | 137.40 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 288 | 137.40 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 291 | 137.40 | radiation | 10 | 1440 | > th | dose dependent | rect. | 14 | 22 |
| 295 | 137.41 | humidity | 80 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 297 | 137.41 | humidity | 80 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 313 | 137.44 | humidity | 80 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 408 | 137.62 | humidity | 70 | 1440 | > th | dose independent | sin | 3 | NA |
| 494 | 137.77 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 503 | 137.80 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 13 |
| 505 | 137.80 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 18 |
| 511 | 137.81 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 11 |
| 526 | 137.82 | humidity | 60 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 550 | 137.90 | radiation | 40 | 1440 | > th | dose independent | rect. | 14 | 22 |
| 623 | 138.10 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 22 |
| 647 | 138.14 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 16 |
| 655 | 138.14 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 20 |
| 660 | 138.14 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 21 |
| 673 | 138.15 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 686 | 138.15 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 14 |
| 730 | 138.15 | humidity | 70 | 1440 | > th | dose independent | rect. | 22 | 22 |
| 766 | 138.18 | radiation | 20 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 801 | 138.24 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 828 | 138.27 | radiation | 10 | 1440 | > th | dose dependent | rect. | 6 | 6 |
| 844 | 138.28 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 20 |
| 847 | 138.28 | humidity | 50 | 1440 | > th | dose dependent | rect. | 2 | 15 |
| 870 | 138.36 | humidity | 50 | 1440 | > th | dose dependent | rect. | 5 | 12 |
| 879 | 138.38 | radiation | 40 | 1440 | < th | dose independent | rect. | 14 | 22 |
| 903 | 138.40 | radiation | 40 | 1440 | < th | dose independent | rect. | 14 | 19 |
| 917 | 138.43 | humidity | 50 | 1440 | > th | dose dependent | rect. | 7 | 10 |
| 918 | 138.44 | humidity | 50 | 1440 | > th | dose dependent | sin | 2 | NA |
| 976 | 138.53 | radiation | 10 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 994 | 138.58 | radiation | 40 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 999 | 138.58 | radiation | 20 | 1440 | < th | dose dependent | rect. | 9 | 9 |