Os05g0468200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0468200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 84.03 | 0.431 | 2.79 | -0.314 | 0.125 | -0.177 | -0.687 | -2.34 | 0.0757 | 6.42 | 8.8 | 5267 | -- | -- |
| 87.87 | 0.437 | 2.86 | -0.148 | 0.0927 | 0.0342 | -0.818 | -- | 0.0292 | 6.38 | 10.8 | 5178 | -- | -- |
| 85.19 | 0.43 | 2.79 | -0.318 | 0.122 | -0.169 | -- | -2.24 | 0.0755 | 6.18 | 8.817 | 5275 | -- | -- |
| 88.04 | 0.437 | 2.87 | -0.131 | 0.125 | 0.163 | -- | -- | -0.0124 | 6.82 | 10 | 5170 | -- | -- |
| 85.96 | 0.432 | 2.79 | -0.326 | -- | -0.192 | -- | -2.3 | 0.0843 | -- | 8.845 | 5276 | -- | -- |
| 87.95 | 0.44 | 2.86 | -0.161 | 0.125 | -- | -0.598 | -- | 0.0228 | 6.13 | -- | -- | -- | -- |
| 88.83 | 0.441 | 2.86 | -0.167 | 0.122 | -- | -- | -- | 0.0249 | 6 | -- | -- | -- | -- |
| 88.65 | 0.439 | 2.87 | -0.112 | -- | 0.194 | -- | -- | -0.0207 | -- | 7.9 | 5302 | -- | -- |
| 88.19 | 0.437 | 2.88 | -- | 0.137 | 0.214 | -- | -- | -0.0228 | 5.86 | 10.03 | 5171 | -- | -- |
| 89.6 | 0.442 | 2.86 | -0.163 | -- | -- | -- | -- | 0.0276 | -- | -- | -- | -- | -- |
| 89.57 | 0.443 | 2.85 | -- | 0.119 | -- | -- | -- | 0.0434 | 6.07 | -- | -- | -- | -- |
| 88.76 | 0.439 | 2.87 | -- | -- | 0.225 | -- | -- | -0.033 | -- | 8.1 | 5318 | -- | -- |
| 90.31 | 0.444 | 2.86 | -- | -- | -- | -- | -- | 0.0458 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 76.99 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 2 | 77.05 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 4 | 77.09 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 5 | 77.12 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 9 | 77.16 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 11 | 77.16 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 16 | 77.21 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 19 | 77.22 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 20 | 77.22 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 23 | 77.25 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 25 | 77.25 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 26 | 77.25 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 30 | 77.25 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 32 | 77.25 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 37 | 77.25 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 38 | 77.25 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 39 | 77.25 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 44 | 77.25 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 47 | 77.46 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 51 | 77.85 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 54 | 78.11 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 102 | 80.10 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 103 | 80.10 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 106 | 80.10 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 110 | 80.10 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 119 | 80.10 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 120 | 80.10 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 140 | 80.10 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 143 | 80.10 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 152 | 80.11 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 161 | 80.30 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 22 | 5 |
| 165 | 80.97 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 167 | 81.13 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 171 | 81.28 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 173 | 81.28 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 177 | 81.46 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 179 | 81.46 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 191 | 81.77 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 196 | 81.80 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 201 | 81.89 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 212 | 81.89 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 225 | 82.06 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 227 | 82.09 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 228 | 82.09 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 229 | 82.13 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 3 |
| 230 | 82.13 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 3 | 3 |
| 231 | 82.13 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 3 |
| 233 | 82.18 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 3 | 2 |
| 259 | 82.52 | wind | 9.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 269 | 82.71 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 271 | 82.72 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 274 | 82.80 | wind | 9.0 | 4320 | < th | dose independent | rect. | 14 | 2 |
| 279 | 82.89 | humidity | 60.0 | 4320 | > th | dose dependent | rect. | 4 | 3 |
| 286 | 83.02 | atmosphere | 1010.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 326 | 83.08 | humidity | 50.0 | 10 | > th | dose independent | sin | 7 | NA |
| 409 | 83.25 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 443 | 83.35 | atmosphere | 1010.0 | 30 | > th | dose dependent | sin | 22 | NA |
| 502 | 83.51 | atmosphere | 1010.0 | 10 | > th | dose dependent | rect. | 24 | 13 |
| 525 | 83.52 | atmosphere | 1010.0 | 30 | > th | dose dependent | sin | 2 | NA |
| 835 | 83.81 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 22 | 10 |
| 956 | 83.86 | temperature | 25.0 | 10 | < th | dose independent | rect. | 2 | 11 |