Os05g0467300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : SelT/selW/selH selenoprotein family protein.
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Os05g0467300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : SelT/selW/selH selenoprotein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.65 | 0.192 | 12.1 | 0.83 | 0.123 | 0.0797 | -0.00241 | 1.3 | 0.128 | 19.2 | 25.51 | 3788 | -- | -- |
| 16.99 | 0.192 | 12.2 | 0.549 | 0.126 | 0.207 | 0.0309 | -- | 0.0636 | 19.3 | 26.9 | 4054 | -- | -- |
| 16.65 | 0.19 | 12.1 | 0.832 | 0.123 | 0.0796 | -- | 1.3 | 0.128 | 19.2 | 25.48 | 3775 | -- | -- |
| 16.96 | 0.192 | 12.2 | 0.545 | 0.122 | 0.21 | -- | -- | 0.0829 | 19.2 | 27.39 | 4078 | -- | -- |
| 17.44 | 0.194 | 12.1 | 0.789 | -- | 0.116 | -- | 1.1 | 0.117 | -- | 24.76 | 3729 | -- | -- |
| 18.34 | 0.201 | 12.2 | 0.607 | 0.122 | -- | 0.139 | -- | 0.0724 | 20.5 | -- | -- | -- | -- |
| 18.38 | 0.201 | 12.2 | 0.603 | 0.125 | -- | -- | -- | 0.0729 | 19.9 | -- | -- | -- | -- |
| 17.73 | 0.196 | 12.2 | 0.545 | -- | 0.219 | -- | -- | 0.0813 | -- | 27.38 | 3789 | -- | -- |
| 18.11 | 0.198 | 12.2 | -- | 0.123 | 0.485 | -- | -- | -0.152 | 19.5 | 16.15 | 47520 | -- | -- |
| 19.23 | 0.205 | 12.2 | 0.602 | -- | -- | -- | -- | 0.0713 | -- | -- | -- | -- | -- |
| 27.97 | 0.247 | 12.2 | -- | 0.121 | -- | -- | -- | 0.00573 | 20.2 | -- | -- | -- | -- |
| 18.92 | 0.203 | 12.2 | -- | -- | 0.485 | -- | -- | -0.156 | -- | 16.27 | 46862 | -- | -- |
| 28.79 | 0.25 | 12.2 | -- | -- | -- | -- | -- | 0.00446 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.65 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 2 | 16.67 | wind | 5 | 90 | < th | dose independent | rect. | 9 | 14 |
| 12 | 16.71 | temperature | 30 | 14400 | < th | dose independent | rect. | 21 | 12 |
| 13 | 16.71 | temperature | 30 | 14400 | < th | dose independent | rect. | 19 | 14 |
| 15 | 16.72 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 16 | 16.72 | temperature | 30 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 19 | 16.72 | temperature | 30 | 14400 | < th | dose independent | rect. | 23 | 10 |
| 22 | 16.72 | temperature | 25 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 30 | 16.74 | temperature | 30 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 44 | 16.74 | temperature | 25 | 4320 | > th | dose dependent | sin | 5 | NA |
| 52 | 16.74 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 9 |
| 74 | 16.75 | temperature | 30 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 75 | 16.75 | temperature | 30 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 78 | 16.75 | temperature | 25 | 4320 | > th | dose dependent | sin | 3 | NA |
| 103 | 16.75 | temperature | 25 | 4320 | > th | dose dependent | rect. | 13 | 20 |
| 110 | 16.76 | temperature | 30 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 111 | 16.76 | temperature | 30 | 4320 | > th | dose independent | rect. | 11 | 3 |
| 112 | 16.76 | temperature | 30 | 4320 | < th | dose independent | rect. | 10 | 4 |
| 113 | 16.76 | wind | 5 | 90 | > th | dose independent | rect. | 15 | 5 |
| 114 | 16.76 | temperature | 30 | 4320 | > th | dose independent | rect. | 8 | 6 |
| 115 | 16.76 | temperature | 30 | 4320 | < th | dose independent | rect. | 8 | 6 |
| 142 | 16.76 | temperature | 25 | 4320 | > th | dose dependent | sin | 1 | NA |
| 144 | 16.76 | temperature | 30 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 206 | 16.77 | temperature | 25 | 4320 | > th | dose dependent | sin | 23 | NA |
| 208 | 16.77 | temperature | 25 | 4320 | > th | dose dependent | no | NA | NA |
| 226 | 16.77 | temperature | 25 | 4320 | > th | dose dependent | rect. | 13 | 11 |
| 332 | 16.78 | temperature | 25 | 4320 | > th | dose dependent | sin | 19 | NA |
| 400 | 16.79 | temperature | 30 | 4320 | > th | dose independent | sin | 7 | NA |
| 403 | 16.79 | temperature | 30 | 4320 | < th | dose independent | sin | 7 | NA |
| 404 | 16.79 | temperature | 30 | 4320 | < th | dose independent | sin | 5 | NA |
| 457 | 16.79 | temperature | 25 | 4320 | > th | dose dependent | sin | 17 | NA |
| 541 | 16.80 | wind | 5 | 90 | > th | dose independent | rect. | 11 | 9 |
| 569 | 16.80 | temperature | 25 | 4320 | > th | dose dependent | sin | 15 | NA |
| 587 | 16.81 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 638 | 16.82 | temperature | 30 | 4320 | > th | dose independent | sin | 2 | NA |
| 640 | 16.82 | temperature | 30 | 4320 | < th | dose independent | sin | 1 | NA |
| 729 | 16.83 | temperature | 30 | 14400 | > th | dose independent | rect. | 17 | 17 |
| 807 | 16.84 | temperature | 30 | 14400 | < th | dose independent | rect. | 17 | 17 |
| 875 | 16.85 | temperature | 30 | 4320 | < th | dose independent | no | NA | NA |