Os05g0465000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0465000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 391.29 | 0.929 | 6.98 | -1.03 | 3.34 | 1.62 | -0.46 | -18.7 | 1.16 | 21.1 | 26.38 | 4694 | -- | -- |
| 472.75 | 1.01 | 6.41 | 3.01 | 3.39 | 0.655 | -0.829 | -- | 1.89 | 21 | 5.228 | 4053 | -- | -- |
| 391.82 | 0.922 | 6.98 | -1.03 | 3.34 | 1.64 | -- | -18.8 | 1.16 | 21.1 | 26.4 | 4763 | -- | -- |
| 472 | 1.01 | 6.46 | 3.01 | 3.34 | 0.602 | -- | -- | 1.86 | 21 | -2.012 | 3994 | -- | -- |
| 986.4 | 1.46 | 6.86 | -1.09 | -- | 2.4 | -- | -16.4 | 0.802 | -- | 24.38 | 2157 | -- | -- |
| 477.58 | 1.02 | 6.43 | 3.26 | 3.36 | -- | -0.509 | -- | 1.98 | 21 | -- | -- | -- | -- |
| 478.47 | 1.02 | 6.43 | 3.28 | 3.36 | -- | -- | -- | 1.98 | 21 | -- | -- | -- | -- |
| 960.7 | 1.44 | 6.46 | 2.54 | -- | 3.23 | -- | -- | 1.46 | -- | 15.6 | 665 | -- | -- |
| 546.78 | 1.09 | 6.67 | -- | 3.33 | 2.36 | -- | -- | 0.908 | 21 | -92.99 | 47520 | -- | -- |
| 1126.67 | 1.57 | 6.34 | 3.28 | -- | -- | -- | -- | 1.96 | -- | -- | -- | -- | -- |
| 761.86 | 1.29 | 6.52 | -- | 3.36 | -- | -- | -- | 1.61 | 21.1 | -- | -- | -- | -- |
| 1109.8 | 1.55 | 6.54 | -- | -- | 4.19 | -- | -- | 1.08 | -- | 13.99 | 676 | -- | -- |
| 1411.11 | 1.75 | 6.42 | -- | -- | -- | -- | -- | 1.59 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 349.28 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 16 | 354.58 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 31 | 356.15 | radiation | 10.0 | 43200 | > th | dose independent | sin | 9 | NA |
| 54 | 358.96 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 60 | 360.28 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 82 | 360.99 | wind | 7.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 97 | 361.42 | wind | 7.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 151 | 362.68 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 5 |
| 156 | 363.25 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 168 | 364.02 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 13 | 12 |
| 170 | 364.11 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 2 | 7 |
| 177 | 364.18 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 189 | 364.75 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 246 | 365.04 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 250 | 365.21 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 13 | 22 |
| 258 | 365.55 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 312 | 367.25 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 13 | 2 |
| 313 | 367.29 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 18 |
| 341 | 367.91 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 2 |
| 345 | 368.11 | radiation | 10.0 | 43200 | > th | dose independent | no | NA | NA |
| 412 | 368.19 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 457 | 368.40 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 459 | 368.40 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 460 | 368.52 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 462 | 368.64 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 474 | 368.87 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 6 | NA |
| 485 | 369.03 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 4 |
| 495 | 369.10 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 504 | 369.42 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 18 | 19 |
| 519 | 369.56 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 541 | 369.83 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 542 | 369.83 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 11 | 2 |
| 545 | 369.93 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 6 | NA |
| 548 | 369.95 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 12 | 20 |
| 562 | 370.05 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 12 | 18 |
| 564 | 370.08 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 14 | 19 |
| 590 | 370.27 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 612 | 370.76 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 628 | 371.03 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 630 | 371.08 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 14 | NA |
| 647 | 371.17 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 10 | 5 |
| 648 | 371.17 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 5 |
| 650 | 371.17 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 5 |
| 667 | 371.38 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 3 |
| 670 | 371.42 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 18 | 17 |
| 679 | 371.57 | wind | 1.0 | 43200 | > th | dose independent | rect. | 16 | 9 |
| 696 | 371.65 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 700 | 371.68 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 702 | 371.69 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 6 |
| 708 | 371.80 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 5 |
| 709 | 371.80 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 5 |
| 710 | 371.81 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 9 | 10 |
| 714 | 371.83 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 18 | 17 |
| 717 | 371.88 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 6 |
| 718 | 371.88 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 6 |
| 719 | 371.89 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 722 | 371.93 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 20 | 17 |
| 747 | 372.08 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 762 | 372.08 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 3 |
| 764 | 372.12 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 767 | 372.16 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 777 | 372.27 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 803 | 372.43 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 10 | NA |
| 903 | 372.58 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 917 | 372.77 | wind | 9.0 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 928 | 372.88 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 929 | 372.88 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 18 | 3 |
| 930 | 372.90 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 10 | 8 |
| 931 | 372.91 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 947 | 373.00 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 963 | 373.00 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |