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Os05g0464300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.73 (0.0506) R2 : 0.863
β1 : -- (--) R2dD : -- R2D : --
β2 : 10.3 (0.223) R2dC : 1.91 R2C : 0.345
β3 : 5.05 (0.219) R2dE : 0.482 R2E : -1.04
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.718 (0.106) R2dN8 : 0.0187 R2N8 : 0.0143
σ : 0.937
deviance : 404.39
__
_____
C
peak time of C : 18.9
E
wheather : temperature
threshold : 4.657
memory length : 278
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 21.4
open length of G : 10.9

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
392.38 0.931 9.79 -0.773 10.3 5.18 -2.11 -2.56 0.569 18.9 6.24 271 21.3 11
401.82 0.934 9.77 -0.543 10.2 5.02 -1.55 -- 0.611 19 6.406 272 21.5 10.9
396.98 0.928 9.77 -0.614 10.3 5.06 -- -0.952 0.609 19 5.728 279 21.3 10.9
397.71 0.929 9.76 -0.49 10.4 5.22 -- -- 0.637 18.9 5.022 280 21.3 10.8
2835.72 2.48 9.5 -1.71 -- 1.84 -- 1.06 0.419 -- 5.915 38782 21.6 11.9
511.63 1.06 9.59 -0.227 6.49 -- -1.02 -- 1.02 20.4 -- -- -- --
514.92 1.06 9.59 -0.195 6.49 -- -- -- 1.02 20.4 -- -- -- --
834.95 1.35 9.4 0.0852 -- -5.4 -- -- 1.08 -- -5.074 39930 2.35 12.2
404.39 0.937 9.73 -- 10.3 5.05 -- -- 0.718 18.9 4.657 278 21.4 10.9
2866.39 2.5 9.42 -0.229 -- -- -- -- 0.952 -- -- -- -- --
515.92 1.06 9.59 -- 6.49 -- -- -- 1.04 20.4 -- -- -- --
795.66 1.31 9.26 -- -- -5.19 -- -- 1.38 -- -23.18 9 2.93 12.9
2867.77 2.5 9.42 -- -- -- -- -- 0.978 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 404.62 temperature 10.0 270 > th dose dependent rect. 21 11
3 410.43 precipitation 0.1 270 < th dose independent rect. 2 10
4 410.43 precipitation 0.1 270 < th dose dependent rect. 2 10
7 414.78 radiation 40.0 90 < th dose independent rect. 13 15
8 415.00 temperature 10.0 270 > th dose independent rect. 2 10
9 415.00 atmosphere 995.0 270 > th dose independent rect. 2 10
10 415.00 atmosphere 1015.0 270 < th dose independent rect. 2 10
11 415.00 temperature 10.0 270 > th dose independent rect. 12 14
13 416.13 temperature 10.0 270 > th dose dependent rect. 21 20
14 416.50 wind 9.0 270 < th dose independent rect. 12 14
15 416.82 temperature 10.0 720 > th dose dependent rect. 21 5
16 418.01 wind 9.0 270 < th dose independent rect. 2 10
18 418.26 atmosphere 1015.0 270 < th dose independent rect. 12 14
20 419.42 precipitation 0.1 270 < th dose independent rect. 12 14
21 419.42 precipitation 0.1 270 < th dose dependent rect. 12 14
22 419.59 temperature 30.0 270 < th dose dependent rect. 3 7
24 421.12 temperature 25.0 270 < th dose dependent rect. 4 5
31 423.11 humidity 50.0 270 > th dose independent rect. 2 10
33 423.56 atmosphere 1015.0 90 < th dose dependent rect. 13 15
34 423.73 temperature 25.0 90 < th dose independent rect. 4 8
36 423.97 atmosphere 1015.0 30 < th dose dependent rect. 15 13
37 424.02 radiation 1.0 720 < th dose dependent rect. 1 6
38 424.03 temperature 25.0 270 < th dose independent rect. 4 6
63 427.57 humidity 70.0 270 > th dose independent rect. 21 11
66 427.71 radiation 10.0 270 < th dose independent rect. 21 10
70 427.93 temperature 25.0 270 < th dose independent rect. 7 1
78 428.16 temperature 10.0 90 > th dose independent rect. 4 9
79 428.16 atmosphere 995.0 90 > th dose independent rect. 4 9
80 428.16 atmosphere 1015.0 90 < th dose independent rect. 4 9
83 428.52 radiation 1.0 90 < th dose dependent rect. 4 20
87 429.45 radiation 1.0 720 < th dose dependent rect. 18 13
99 429.99 atmosphere 1015.0 30 < th dose independent rect. 15 13
101 430.19 atmosphere 995.0 270 > th dose dependent rect. 17 4
102 430.24 humidity 50.0 90 > th dose independent rect. 4 9
111 430.42 radiation 1.0 270 < th dose dependent rect. 5 16
115 430.58 atmosphere 1015.0 270 < th dose independent rect. 21 20
117 430.76 radiation 1.0 720 < th dose dependent sin 9 NA
124 430.91 radiation 1.0 90 < th dose independent rect. 4 20
127 431.05 atmosphere 1015.0 270 < th dose independent rect. 21 10
130 431.21 atmosphere 995.0 270 > th dose dependent rect. 16 6
134 431.48 temperature 15.0 270 > th dose independent rect. 21 20
141 431.81 temperature 15.0 720 > th dose dependent rect. 23 1
143 431.82 precipitation 0.1 270 < th dose independent rect. 16 21
145 431.82 precipitation 0.1 270 < th dose dependent rect. 16 21
154 432.01 radiation 10.0 10 < th dose independent rect. 24 17
161 432.37 temperature 30.0 30 < th dose dependent rect. 4 8
162 432.41 radiation 1.0 720 < th dose dependent rect. 18 15
169 432.71 wind 1.0 270 > th dose independent rect. 13 3
175 432.90 humidity 50.0 270 > th dose independent rect. 16 6
177 432.95 precipitation 0.1 270 < th dose independent rect. 13 3
178 432.95 precipitation 0.1 270 < th dose dependent rect. 13 3
179 432.97 wind 9.0 270 < th dose independent rect. 13 3
180 433.02 temperature 10.0 270 > th dose independent rect. 13 3
182 433.02 atmosphere 1010.0 270 < th dose independent rect. 13 3
184 433.02 temperature 10.0 270 > th dose independent rect. 16 21
220 433.98 radiation 1.0 720 < th dose independent rect. 1 6
227 434.29 atmosphere 995.0 90 > th dose independent rect. 13 15
232 434.46 radiation 1.0 720 > th dose independent rect. 5 4
233 434.53 radiation 40.0 270 < th dose dependent rect. 21 11
235 434.79 temperature 30.0 30 < th dose dependent rect. 18 19
250 435.12 precipitation 0.1 30 < th dose independent rect. 4 11
251 435.12 precipitation 0.1 30 < th dose dependent rect. 4 11
259 435.19 temperature 30.0 270 < th dose independent rect. 16 6
265 435.26 radiation 40.0 90 < th dose independent rect. 13 5
268 435.33 temperature 10.0 30 > th dose independent rect. 4 11
270 435.33 atmosphere 995.0 30 > th dose independent rect. 4 11
271 435.33 atmosphere 1015.0 30 < th dose independent rect. 4 11
272 435.33 temperature 10.0 30 > th dose independent rect. 15 13
275 435.41 wind 9.0 270 < th dose independent rect. 16 21
277 435.43 atmosphere 995.0 270 > th dose independent rect. 16 21
279 435.47 temperature 30.0 270 < th dose independent rect. 2 10
281 435.52 humidity 60.0 270 > th dose independent rect. 17 4
283 435.61 temperature 30.0 270 < th dose independent rect. 17 4
298 435.72 radiation 40.0 30 < th dose independent rect. 15 13
300 435.79 humidity 50.0 270 > th dose independent rect. 16 20
315 436.20 wind 9.0 30 < th dose independent rect. 15 13
324 436.45 temperature 10.0 270 > th dose independent rect. 21 10
325 436.45 temperature 30.0 270 < th dose independent rect. 21 10
326 436.45 humidity 50.0 270 > th dose independent rect. 21 10
328 436.45 atmosphere 995.0 270 > th dose independent rect. 21 10
330 436.45 temperature 10.0 270 > th dose independent rect. 7 14
331 436.46 radiation 10.0 270 < th dose dependent rect. 17 4
347 436.72 wind 9.0 270 < th dose independent rect. 21 10
352 436.81 wind 9.0 270 < th dose independent rect. 21 21
353 436.83 atmosphere 995.0 270 > th dose independent rect. 13 3
357 436.96 radiation 1.0 270 > th dose independent rect. 13 3
361 437.03 radiation 30.0 270 < th dose dependent rect. 16 6
368 437.19 radiation 20.0 270 < th dose independent rect. 16 6
371 437.23 precipitation 0.1 270 < th dose independent rect. 7 14
372 437.23 precipitation 0.1 270 < th dose dependent rect. 7 14
389 437.66 wind 9.0 270 < th dose independent rect. 22 19
393 437.72 wind 1.0 90 > th dose independent rect. 4 9
413 438.03 precipitation 0.1 270 < th dose independent rect. 18 3
414 438.03 precipitation 0.1 270 < th dose dependent rect. 18 3
428 438.24 wind 1.0 270 > th dose independent rect. 12 14
438 438.34 radiation 10.0 270 < th dose independent rect. 17 4
442 438.38 radiation 1.0 270 < th dose independent rect. 5 16
457 438.80 temperature 30.0 30 < th dose independent rect. 4 21
458 438.81 wind 1.0 270 > th dose independent rect. 2 10
469 439.05 atmosphere 995.0 270 > th dose independent rect. 18 3
473 439.28 precipitation 0.1 30 < th dose independent rect. 15 13
474 439.28 precipitation 0.1 30 < th dose dependent rect. 15 13
483 439.37 temperature 10.0 270 > th dose independent rect. 18 3
501 439.49 wind 9.0 270 < th dose independent rect. 18 3
503 439.52 temperature 30.0 90 < th dose independent rect. 18 19
504 439.52 atmosphere 1015.0 90 < th dose dependent rect. 23 5
505 439.53 wind 1.0 270 > th dose independent rect. 18 3
510 439.60 temperature 10.0 30 > th dose dependent rect. 15 13
512 439.61 wind 9.0 30 < th dose independent rect. 4 11
518 439.70 wind 1.0 270 > th dose independent rect. 7 14
528 439.76 humidity 50.0 30 > th dose independent rect. 4 21
534 439.79 precipitation 0.1 270 < th dose independent rect. 21 10
535 439.79 precipitation 0.1 270 < th dose dependent rect. 21 10
537 439.85 temperature 30.0 270 < th dose independent rect. 16 20
554 440.25 humidity 90.0 270 < th dose independent rect. 12 4
592 440.70 radiation 1.0 270 < th dose dependent rect. 5 4
598 440.75 radiation 1.0 720 < th dose independent rect. 18 13
599 440.76 atmosphere 1015.0 270 < th dose dependent rect. 23 3
626 441.17 radiation 40.0 10 < th dose dependent rect. 24 18
652 441.48 radiation 40.0 10 < th dose dependent rect. 13 15
654 441.52 wind 9.0 270 < th dose dependent rect. 13 3
656 441.54 radiation 1.0 720 < th dose independent rect. 1 8
664 441.62 precipitation 0.1 270 < th dose independent rect. 21 20
665 441.62 precipitation 0.1 270 < th dose dependent rect. 21 20
671 441.72 temperature 10.0 1440 > th dose independent rect. 5 9
674 441.72 atmosphere 995.0 1440 > th dose independent rect. 5 9
676 441.72 temperature 10.0 1440 > th dose independent rect. 14 15
691 441.94 temperature 30.0 30 < th dose dependent rect. 4 21
693 441.96 atmosphere 1015.0 30 < th dose dependent rect. 1 3
699 442.01 radiation 10.0 10 < th dose independent rect. 24 11
723 442.24 precipitation 0.1 270 < th dose independent rect. 22 18
724 442.24 precipitation 0.1 270 < th dose dependent rect. 22 18
735 442.36 atmosphere 995.0 30 > th dose independent rect. 15 13
749 442.56 radiation 1.0 720 > th dose independent rect. 6 1
769 442.79 temperature 10.0 270 > th dose dependent rect. 13 3
786 443.01 wind 9.0 270 < th dose independent rect. 7 14
807 443.38 temperature 30.0 10 < th dose independent rect. 18 7
812 443.44 radiation 40.0 270 < th dose independent rect. 13 3
814 443.49 humidity 50.0 30 > th dose independent rect. 4 11
820 443.56 humidity 50.0 270 > th dose independent rect. 13 3
823 443.59 humidity 60.0 10 > th dose independent rect. 18 7
831 443.65 radiation 1.0 30 < th dose dependent rect. 17 8
837 443.74 wind 9.0 270 < th dose dependent rect. 12 5
843 443.76 atmosphere 995.0 270 > th dose independent rect. 22 18
856 443.89 temperature 10.0 720 > th dose dependent rect. 6 1
884 444.17 temperature 10.0 720 > th dose dependent rect. 5 4
908 444.51 humidity 90.0 270 < th dose independent rect. 18 3
910 444.51 wind 1.0 30 > th dose independent rect. 4 21
930 444.71 temperature 30.0 270 < th dose independent rect. 2 21
937 444.80 radiation 1.0 270 < th dose dependent rect. 5 7
944 444.85 temperature 10.0 270 > th dose dependent rect. 5 12
948 444.90 atmosphere 995.0 30 > th dose independent rect. 4 21
965 445.01 temperature 10.0 90 > th dose dependent rect. 13 14
970 445.05 atmosphere 1015.0 270 < th dose dependent rect. 13 3
973 445.07 humidity 80.0 30 > th dose independent rect. 1 3