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Os05g0464200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.36 (0.0447) R2 : 0.853
β1 : 1.07 (0.164) R2dD : 0.0145 R2D : 0.0192
β2 : 5.38 (0.109) R2dC : 0.84 R2C : 0.665
β3 : 2.81 (0.128) R2dE : 0.166 R2E : -0.00622
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.315 (0.0954) R2dN8 : 0.00505 R2N8 : 0.00144
σ : 0.835
deviance : 321.46
__
_____
C
peak time of C : 24
E
wheather : radiation
threshold : 0.08
memory length : 268
response mode : > th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 12
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
303.76 0.819 7.38 0.886 5.28 2.86 -1.5 -2.96 0.287 24 0.08194 266 11.6 --
318.24 0.831 7.36 0.957 5.32 2.86 -0.938 -- 0.303 24 0.08 271 11.8 --
312.79 0.824 7.37 0.927 5.3 2.84 -- -2.31 0.292 24 0.09 268 11.6 --
321.46 0.835 7.36 1.07 5.38 2.81 -- -- 0.315 24 0.08 268 12 --
395.97 0.927 7.23 1.31 -- 5.29 -- -1.24 0.45 -- -137.9 414 11.1 --
395.97 0.933 7.37 1.28 5.3 -- -1.25 -- 0.451 22.3 -- -- -- --
402.23 0.939 7.37 1.33 5.31 -- -- -- 0.454 22.3 -- -- -- --
402.23 0.934 7.23 1.33 -- 5.29 -- -- 0.454 -- -168.3 427 11.2 --
352.69 0.875 7.35 -- 5.4 2.84 -- -- 0.289 0.0047 0.05 267 12.1 --
2120.02 2.15 7.23 1.41 -- -- -- -- 0.469 -- -- -- -- --
448.58 0.991 7.4 -- 5.31 -- -- -- 0.306 22.4 -- -- -- --
448.58 0.986 7.26 -- -- 5.29 -- -- 0.306 -- -159.7 435 11.3 --
2172.44 2.18 7.26 -- -- -- -- -- 0.313 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 295.57 temperature 10.0 90 > th dose dependent rect. 15 14
2 298.98 temperature 15.0 90 > th dose independent rect. 15 14
3 299.81 humidity 60.0 90 > th dose dependent rect. 19 6
6 301.54 wind 1.0 270 > th dose dependent rect. 15 1
7 302.16 wind 7.0 270 < th dose independent rect. 17 7
9 302.79 wind 1.0 270 > th dose dependent rect. 14 3
11 303.19 humidity 50.0 270 > th dose dependent rect. 17 7
13 303.94 humidity 90.0 270 < th dose independent rect. 15 1
15 304.34 radiation 1.0 270 < th dose dependent rect. 16 8
18 304.57 wind 7.0 270 < th dose independent rect. 19 3
21 304.94 humidity 90.0 270 < th dose independent rect. 14 3
23 305.50 temperature 10.0 270 > th dose dependent rect. 13 15
24 305.52 atmosphere 1000.0 90 > th dose independent rect. 1 18
28 306.07 wind 9.0 270 < th dose dependent rect. 18 5
29 306.10 radiation 40.0 270 < th dose independent rect. 15 1
30 306.15 wind 9.0 270 < th dose dependent rect. 17 7
33 306.25 wind 1.0 270 > th dose dependent rect. 13 5
35 306.32 wind 9.0 270 < th dose independent rect. 16 23
36 306.44 radiation 1.0 270 < th dose independent rect. 16 8
37 306.49 wind 3.0 270 > th dose independent rect. 14 3
39 306.73 wind 1.0 270 > th dose independent rect. 15 1
49 307.59 atmosphere 995.0 90 > th dose independent rect. 5 10
54 307.88 wind 9.0 270 < th dose dependent rect. 19 3
57 308.10 wind 3.0 270 > th dose independent rect. 13 5
60 308.23 radiation 1.0 270 > th dose independent rect. 15 2
61 308.25 radiation 40.0 90 < th dose independent rect. 15 14
65 308.34 temperature 10.0 90 > th dose independent rect. 5 10
66 308.34 atmosphere 1015.0 90 < th dose independent rect. 5 10
70 308.47 precipitation 0.1 270 < th dose independent rect. 15 1
71 308.47 precipitation 0.1 270 < th dose dependent rect. 15 1
75 308.59 temperature 10.0 270 > th dose independent rect. 15 1
77 308.59 atmosphere 1010.0 270 < th dose independent rect. 15 1
79 308.59 temperature 10.0 270 > th dose independent rect. 16 23
84 308.90 humidity 90.0 270 < th dose independent rect. 13 5
91 309.20 precipitation 0.1 90 < th dose independent rect. 5 10
92 309.20 precipitation 0.1 90 < th dose dependent rect. 5 10
93 309.21 wind 9.0 270 < th dose independent rect. 17 21
94 309.30 humidity 50.0 270 > th dose independent rect. 17 7
95 309.31 atmosphere 995.0 90 > th dose independent rect. 19 20
103 309.52 humidity 50.0 90 > th dose independent rect. 19 20
104 309.53 wind 9.0 90 < th dose independent rect. 5 10
105 309.59 precipitation 0.1 90 < th dose independent rect. 19 20
106 309.59 precipitation 0.1 90 < th dose dependent rect. 19 20
107 309.61 atmosphere 1015.0 270 < th dose independent rect. 24 18
108 309.62 temperature 10.0 270 > th dose independent rect. 18 6
110 309.62 radiation 20.0 270 < th dose independent rect. 18 6
113 309.62 temperature 10.0 270 > th dose independent rect. 24 18
124 309.75 atmosphere 995.0 90 > th dose dependent rect. 15 4
127 309.92 radiation 40.0 90 < th dose independent rect. 15 4
128 309.96 wind 9.0 90 < th dose independent rect. 19 20
141 310.12 temperature 10.0 90 > th dose independent rect. 15 4
143 310.12 atmosphere 1010.0 90 < th dose independent rect. 15 4
145 310.12 temperature 10.0 90 > th dose independent rect. 19 20
146 310.13 precipitation 0.1 270 < th dose independent rect. 17 7
147 310.13 precipitation 0.1 270 < th dose dependent rect. 17 7
149 310.16 atmosphere 995.0 270 > th dose dependent rect. 15 1
150 310.20 temperature 15.0 270 > th dose independent rect. 22 21
161 310.41 humidity 50.0 270 > th dose independent rect. 17 21
170 310.76 atmosphere 995.0 270 > th dose independent rect. 18 6
175 310.95 precipitation 0.1 270 < th dose independent rect. 24 18
176 310.95 precipitation 0.1 270 < th dose dependent rect. 24 18
203 311.31 temperature 10.0 270 > th dose independent rect. 17 21
207 311.39 atmosphere 1000.0 10 > th dose independent rect. 1 19
209 311.43 precipitation 0.1 270 < th dose independent rect. 17 21
210 311.43 precipitation 0.1 270 < th dose dependent rect. 17 21
212 311.48 temperature 30.0 270 < th dose independent rect. 19 4
214 311.48 atmosphere 995.0 270 > th dose independent rect. 19 4
227 311.52 wind 9.0 270 < th dose independent rect. 15 1
229 311.57 wind 9.0 10 < th dose independent rect. 20 19
232 311.60 atmosphere 995.0 10 > th dose dependent rect. 15 5
238 311.81 precipitation 0.1 10 < th dose independent rect. 15 5
239 311.81 precipitation 0.1 10 < th dose dependent rect. 15 5
242 311.91 precipitation 0.1 270 < th dose independent rect. 14 3
243 311.91 precipitation 0.1 270 < th dose dependent rect. 14 3
268 312.05 radiation 30.0 10 < th dose independent rect. 14 6
279 312.23 temperature 30.0 270 < th dose independent rect. 18 6
286 312.35 humidity 50.0 10 > th dose independent rect. 20 19
288 312.37 humidity 60.0 10 > th dose dependent rect. 19 6
289 312.38 wind 9.0 90 < th dose independent rect. 15 4
290 312.38 temperature 10.0 10 > th dose independent rect. 15 5
292 312.38 atmosphere 1010.0 10 < th dose independent rect. 15 5
294 312.38 temperature 10.0 10 > th dose independent rect. 20 19
295 312.38 atmosphere 995.0 10 > th dose independent rect. 20 19
296 312.39 precipitation 0.1 270 < th dose independent rect. 19 3
297 312.39 precipitation 0.1 270 < th dose dependent rect. 19 3
308 312.55 wind 1.0 10 > th dose independent rect. 15 5
312 312.64 precipitation 0.1 270 < th dose independent rect. 16 23
313 312.64 precipitation 0.1 270 < th dose dependent rect. 16 23
314 312.70 radiation 1.0 270 > th dose independent rect. 13 5
318 312.75 humidity 50.0 270 > th dose independent rect. 4 10
324 312.89 temperature 10.0 90 > th dose dependent rect. 5 10
325 312.91 wind 9.0 270 < th dose independent rect. 24 17
330 313.00 temperature 10.0 90 > th dose dependent rect. 15 5
332 313.02 humidity 90.0 10 < th dose independent rect. 15 5
333 313.04 wind 1.0 90 > th dose independent rect. 5 10
335 313.06 wind 9.0 90 < th dose independent rect. 15 14
357 313.31 radiation 1.0 270 > th dose independent sin 17 NA
371 313.42 temperature 15.0 270 > th dose independent rect. 23 10
377 313.50 wind 9.0 270 < th dose dependent rect. 9 14
378 313.50 radiation 1.0 270 < th dose dependent rect. 5 19
383 313.54 temperature 10.0 270 > th dose dependent rect. 15 1
385 313.55 precipitation 0.1 10 < th dose independent rect. 20 19
386 313.55 precipitation 0.1 10 < th dose dependent rect. 20 19
393 313.63 radiation 1.0 270 < th dose dependent sin 17 NA
463 314.49 temperature 10.0 1440 > th dose independent rect. 16 5
466 314.49 temperature 10.0 1440 > th dose independent rect. 21 19
470 314.54 wind 9.0 10 < th dose independent rect. 15 5
478 314.63 wind 1.0 270 > th dose independent rect. 19 3
487 314.70 wind 1.0 270 > th dose independent rect. 18 6
493 314.74 atmosphere 995.0 270 > th dose independent rect. 15 1
510 314.89 atmosphere 995.0 270 > th dose independent rect. 17 21
517 314.98 wind 9.0 270 < th dose independent rect. 9 14
519 315.04 temperature 10.0 270 > th dose independent rect. 13 5
521 315.04 atmosphere 1010.0 270 < th dose independent rect. 13 5
525 315.05 wind 5.0 270 < th dose independent rect. 9 14
526 315.05 radiation 40.0 10 < th dose dependent rect. 24 20
540 315.35 atmosphere 995.0 90 > th dose independent rect. 15 4
570 315.83 precipitation 0.1 270 < th dose independent rect. 13 5
571 315.83 precipitation 0.1 270 < th dose dependent rect. 13 5
579 315.98 temperature 10.0 270 > th dose dependent rect. 23 8
582 316.04 wind 5.0 270 < th dose independent rect. 5 19
604 316.50 wind 5.0 270 < th dose independent rect. 7 16
615 316.57 wind 1.0 90 > th dose independent rect. 19 20
638 316.78 radiation 1.0 270 < th dose independent sin 16 NA
652 316.98 precipitation 0.1 270 < th dose independent rect. 14 14
653 316.98 precipitation 0.1 270 < th dose dependent rect. 14 14
660 317.08 atmosphere 995.0 270 > th dose dependent rect. 13 5
690 317.72 wind 9.0 270 < th dose independent rect. 13 5
722 318.06 radiation 40.0 10 < th dose dependent rect. 15 5
731 318.17 radiation 40.0 90 < th dose independent rect. 1 18
738 318.28 wind 7.0 270 < th dose independent rect. 19 16
748 318.39 humidity 50.0 270 > th dose independent rect. 23 10
749 318.39 atmosphere 995.0 270 > th dose independent rect. 23 10
750 318.39 temperature 10.0 270 > th dose independent rect. 9 14
752 318.44 wind 9.0 270 < th dose independent rect. 23 10
788 318.70 atmosphere 995.0 10 > th dose independent rect. 15 5
805 318.88 atmosphere 1015.0 270 < th dose independent rect. 23 10
812 319.02 atmosphere 995.0 270 > th dose independent rect. 13 5
866 319.47 atmosphere 1015.0 90 < th dose independent rect. 15 14
869 319.50 temperature 15.0 10 > th dose independent rect. 15 15
886 319.78 precipitation 0.1 270 < th dose independent rect. 23 10
888 319.78 precipitation 0.1 270 < th dose dependent rect. 23 10
923 320.04 atmosphere 1015.0 270 < th dose independent rect. 19 3
936 320.15 temperature 10.0 270 > th dose dependent rect. 13 5
950 320.27 atmosphere 995.0 90 > th dose independent rect. 15 14
985 320.67 wind 1.0 270 > th dose independent rect. 17 21
986 320.68 humidity 50.0 270 > th dose independent rect. 15 1