Os05g0463600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0463600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.09 | 0.183 | 12.7 | 1.27 | 0.184 | 0.439 | 0.0308 | 0.00574 | 0.319 | 21.8 | 79.66 | 1593 | -- | -- |
| 15.08 | 0.181 | 12.7 | 1.26 | 0.203 | 0.421 | 0.0107 | -- | 0.319 | 21.4 | 79.49 | 1719 | -- | -- |
| 15.08 | 0.181 | 12.7 | 1.27 | 0.211 | 0.429 | -- | -0.0431 | 0.32 | 21.2 | 79.52 | 1736 | -- | -- |
| 15.08 | 0.181 | 12.7 | 1.27 | 0.21 | 0.426 | -- | -- | 0.319 | 21.2 | 79.6 | 1736 | -- | -- |
| 17.11 | 0.193 | 12.7 | 1.28 | -- | 0.471 | -- | -0.0521 | 0.316 | -- | 78.39 | 1570 | -- | -- |
| 17.21 | 0.194 | 12.7 | 1.26 | 0.197 | -- | 0.0411 | -- | 0.297 | 22.6 | -- | -- | -- | -- |
| 17.22 | 0.194 | 12.7 | 1.26 | 0.197 | -- | -- | -- | 0.297 | 22.6 | -- | -- | -- | -- |
| 17.11 | 0.193 | 12.7 | 1.28 | -- | 0.468 | -- | -- | 0.316 | -- | 78.38 | 1568 | -- | -- |
| 55.73 | 0.348 | 12.7 | -- | 0.229 | 0.438 | -- | -- | 0.335 | 22.4 | 80.22 | 7736 | -- | -- |
| 19.61 | 0.207 | 12.7 | 1.26 | -- | -- | -- | -- | 0.298 | -- | -- | -- | -- | -- |
| 59.06 | 0.359 | 12.7 | -- | 0.207 | -- | -- | -- | 0.157 | 23.1 | -- | -- | -- | -- |
| 34.25 | 0.273 | 12.7 | -- | -- | 1.04 | -- | -- | 0.109 | -- | 64.9 | 47520 | -- | -- |
| 61.73 | 0.367 | 12.7 | -- | -- | -- | -- | -- | 0.158 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.75 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 5 |
| 9 | 14.79 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 67 | 14.92 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 68 | 14.92 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 72 | 14.93 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 22 |
| 76 | 14.94 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 16 | NA |
| 82 | 14.95 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 18 |
| 84 | 14.95 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 22 |
| 90 | 14.96 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 19 | 2 |
| 93 | 14.96 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 18 |
| 97 | 14.97 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 108 | 14.98 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 119 | 14.99 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 18 |
| 122 | 14.99 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 15 | NA |
| 129 | 15.00 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 140 | 15.00 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 13 | 16 |
| 144 | 15.01 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 145 | 15.01 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 18 | 6 |
| 151 | 15.01 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 157 | 15.01 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 13 | 14 |
| 170 | 15.02 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 13 | 19 |
| 195 | 15.04 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 23 | 7 |
| 250 | 15.06 | humidity | 80.0 | 1440 | > th | dose independent | sin | 17 | NA |
| 254 | 15.06 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 13 | 19 |
| 270 | 15.07 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 13 | 15 |
| 277 | 15.07 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 283 | 15.07 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 15 | 15 |
| 290 | 15.08 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 13 | 11 |
| 325 | 15.09 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 13 | NA |
| 341 | 15.10 | humidity | 80.0 | 1440 | < th | dose independent | sin | 17 | NA |
| 364 | 15.10 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 17 | 12 |
| 389 | 15.11 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 11 | 2 |
| 415 | 15.12 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 13 | 15 |
| 434 | 15.13 | wind | 1.0 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 469 | 15.14 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 20 | 2 |
| 484 | 15.14 | humidity | 70.0 | 1440 | > th | dose dependent | no | NA | NA |
| 486 | 15.14 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 24 | 5 |
| 516 | 15.14 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 517 | 15.14 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 533 | 15.15 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 21 |
| 534 | 15.15 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 22 |
| 537 | 15.15 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 542 | 15.15 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 573 | 15.15 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 578 | 15.16 | humidity | 80.0 | 1440 | > th | dose independent | no | NA | NA |
| 579 | 15.16 | humidity | 80.0 | 1440 | < th | dose independent | no | NA | NA |
| 580 | 15.16 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 20 | 2 |
| 581 | 15.16 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 7 |
| 645 | 15.17 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 647 | 15.17 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 677 | 15.17 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 683 | 15.17 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 684 | 15.17 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 23 |
| 686 | 15.17 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 690 | 15.17 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 691 | 15.17 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 21 | 23 |
| 705 | 15.17 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 9 |
| 782 | 15.18 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 8 | 5 |
| 788 | 15.18 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 9 |
| 818 | 15.19 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 18 | 5 |
| 848 | 15.19 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 7 |
| 875 | 15.19 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 877 | 15.20 | wind | 3.0 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 939 | 15.20 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 14 |
| 940 | 15.20 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 24 | 14 |
| 941 | 15.20 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 24 | 14 |
| 948 | 15.20 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 5 | 19 |