Os05g0463500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0463500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 115.03 | 0.504 | 7.22 | 1.65 | 0.257 | 0.398 | -0.241 | -0.515 | -0.318 | 11.9 | 24.6 | 321 | -- | -- |
| 115.87 | 0.501 | 7.24 | 1.49 | 0.267 | 0.35 | -0.203 | -- | -0.388 | 11.4 | 24.59 | 315 | -- | -- |
| 115.27 | 0.5 | 7.22 | 1.63 | 0.257 | 0.396 | -- | -0.482 | -0.323 | 11.8 | 24.6 | 322 | -- | -- |
| 115.99 | 0.502 | 7.24 | 1.48 | 0.259 | 0.371 | -- | -- | -0.377 | 11.7 | 24.5 | 320 | -- | -- |
| 118.26 | 0.506 | 7.23 | 1.62 | -- | 0.411 | -- | -0.551 | -0.333 | -- | 24.8 | 462 | -- | -- |
| 122.95 | 0.52 | 7.28 | 1.36 | 0.31 | -- | -0.267 | -- | -0.558 | 9.12 | -- | -- | -- | -- |
| 123.2 | 0.52 | 7.28 | 1.35 | 0.31 | -- | -- | -- | -0.558 | 9.13 | -- | -- | -- | -- |
| 119.33 | 0.509 | 7.25 | 1.48 | -- | 0.404 | -- | -- | -0.383 | -- | 24.74 | 462 | -- | -- |
| 170.79 | 0.609 | 7.29 | -- | 0.253 | 0.204 | -- | -- | -0.634 | 11.1 | 24.9 | 311 | -- | -- |
| 128.77 | 0.53 | 7.29 | 1.35 | -- | -- | -- | -- | -0.556 | -- | -- | -- | -- | -- |
| 171.44 | 0.612 | 7.31 | -- | 0.313 | -- | -- | -- | -0.708 | 8.8 | -- | -- | -- | -- |
| 174.28 | 0.615 | 7.3 | -- | -- | 0.213 | -- | -- | -0.624 | -- | 25 | 467 | -- | -- |
| 176.99 | 0.621 | 7.32 | -- | -- | -- | -- | -- | -0.706 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 107.48 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 2 | 107.97 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 3 | 108.02 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 4 | 108.06 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 5 | 108.06 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 7 | 108.07 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 8 | 108.07 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 11 | 108.07 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 15 | 108.07 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 24 | 108.07 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 25 | 108.07 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 45 | 108.07 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 57 | 108.09 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 61 | 108.10 | wind | 9.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 62 | 108.10 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 65 | 108.10 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 68 | 108.10 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 69 | 108.10 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 71 | 108.10 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 76 | 108.10 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 77 | 108.10 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 79 | 108.10 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 85 | 108.10 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 89 | 108.13 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 90 | 108.13 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 91 | 108.13 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 95 | 108.14 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 100 | 108.18 | wind | 5.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 102 | 108.21 | wind | 9.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 107 | 108.28 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 155 | 108.64 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 3 |
| 171 | 109.00 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 172 | 109.00 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 196 | 110.99 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 197 | 110.99 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 200 | 111.38 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 209 | 112.00 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 2 | 10 |
| 210 | 112.01 | temperature | 25.0 | 270 | > th | dose independent | rect. | 22 | 10 |
| 222 | 112.68 | temperature | 25.0 | 270 | > th | dose independent | sin | 10 | NA |
| 227 | 112.81 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 1 | 2 |
| 235 | 113.01 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 22 | 10 |
| 242 | 113.18 | temperature | 25.0 | 270 | < th | dose independent | sin | 10 | NA |
| 246 | 113.25 | temperature | 25.0 | 270 | < th | dose independent | rect. | 19 | 13 |
| 277 | 113.52 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 2 | 13 |
| 293 | 113.69 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 22 | 10 |
| 299 | 113.82 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 7 |
| 321 | 114.04 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 24 | 8 |
| 330 | 114.26 | radiation | 10.0 | 30 | > th | dose independent | rect. | 16 | 15 |
| 333 | 114.29 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 5 |
| 345 | 114.40 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 371 | 114.67 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 22 | 5 |
| 384 | 114.76 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 24 | 3 |
| 404 | 114.91 | temperature | 25.0 | 270 | > th | dose independent | rect. | 17 | 16 |
| 415 | 115.00 | temperature | 25.0 | 270 | < th | dose independent | rect. | 19 | 18 |
| 419 | 115.03 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 2 | 21 |
| 432 | 115.09 | temperature | 25.0 | 270 | < th | dose independent | rect. | 10 | 22 |
| 442 | 115.14 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 471 | 115.29 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 472 | 115.30 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 481 | 115.32 | radiation | 10.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 507 | 115.32 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 533 | 115.33 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 537 | 115.34 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 1 | 14 |
| 543 | 115.37 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 24 | 9 |
| 572 | 115.42 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 17 | 23 |
| 582 | 115.44 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 22 | 4 |
| 615 | 115.57 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 622 | 115.60 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 13 | 23 |
| 628 | 115.62 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 1 | 7 |
| 653 | 115.70 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 4 |
| 658 | 115.71 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 1 | 11 |
| 659 | 115.72 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 661 | 115.72 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 12 |
| 665 | 115.73 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 12 |
| 669 | 115.73 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 3 | 3 |
| 670 | 115.73 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 679 | 115.77 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 680 | 115.78 | atmosphere | 1010.0 | 10 | < th | dose independent | sin | 6 | NA |
| 685 | 115.79 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 7 | 5 |
| 686 | 115.79 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 5 |
| 694 | 115.81 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 696 | 115.81 | temperature | 25.0 | 270 | > th | dose independent | rect. | 22 | 22 |
| 710 | 115.84 | wind | 3.0 | 720 | < th | dose independent | rect. | 2 | 1 |
| 716 | 115.85 | temperature | 25.0 | 270 | > th | dose independent | rect. | 16 | 20 |
| 726 | 115.87 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 1 | 22 |
| 730 | 115.89 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 14 | 13 |
| 731 | 115.90 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 2 |
| 745 | 115.92 | temperature | 25.0 | 270 | > th | dose independent | rect. | 14 | 22 |
| 747 | 115.93 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 755 | 115.95 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 768 | 115.97 | radiation | 20.0 | 270 | < th | dose independent | rect. | 14 | 13 |
| 785 | 116.00 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 5 |
| 819 | 116.08 | temperature | 25.0 | 270 | < th | dose independent | no | NA | NA |
| 828 | 116.09 | wind | 1.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 832 | 116.10 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 854 | 116.13 | wind | 1.0 | 10 | > th | dose independent | rect. | 23 | 10 |
| 857 | 116.13 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 23 |
| 867 | 116.16 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 870 | 116.16 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 873 | 116.17 | temperature | 15.0 | 90 | > th | dose independent | rect. | 1 | 14 |
| 877 | 116.18 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 2 | 14 |
| 878 | 116.19 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 928 | 116.27 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 929 | 116.28 | wind | 1.0 | 10 | > th | dose independent | sin | 16 | NA |
| 959 | 116.34 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 970 | 116.35 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 2 | 19 |
| 971 | 116.35 | temperature | 25.0 | 720 | > th | dose dependent | sin | 10 | NA |
| 977 | 116.37 | wind | 1.0 | 720 | > th | dose independent | rect. | 5 | 10 |