Os05g0463000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Receptor protein kinase-like protein.
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Os05g0463000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Receptor protein kinase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 211.45 | 0.683 | 2.94 | 0.264 | 0.0584 | 0.746 | -0.431 | 3.36 | 0.181 | 5.66 | 1003 | 5975 | -- | -- |
| 221.57 | 0.693 | 2.96 | 0.199 | 0.0713 | 1.07 | -0.373 | -- | 0.194 | 5.25 | 1003 | 5987 | -- | -- |
| 211.66 | 0.678 | 2.94 | 0.257 | 0.0829 | 0.749 | -- | 3.34 | 0.181 | 2.38 | 1003 | 5962 | -- | -- |
| 221.71 | 0.693 | 2.96 | 0.166 | 0.0938 | 1.06 | -- | -- | 0.196 | 2.31 | 1003 | 5977 | -- | -- |
| 212.07 | 0.678 | 2.94 | 0.263 | -- | 0.742 | -- | 3.37 | 0.184 | -- | 1003 | 5964 | -- | -- |
| 243.27 | 0.731 | 2.98 | 0.292 | 0.0599 | -- | -0.395 | -- | 0.1 | 5.67 | -- | -- | -- | -- |
| 243.41 | 0.731 | 2.98 | 0.288 | 0.0834 | -- | -- | -- | 0.101 | 2.51 | -- | -- | -- | -- |
| 222.23 | 0.694 | 2.96 | 0.171 | -- | 1.06 | -- | -- | 0.198 | -- | 1003 | 5984 | -- | -- |
| 222.43 | 0.695 | 2.97 | -- | 0.0972 | 1.09 | -- | -- | 0.181 | 2.34 | 1003 | 5975 | -- | -- |
| 243.82 | 0.73 | 2.98 | 0.291 | -- | -- | -- | -- | 0.103 | -- | -- | -- | -- | -- |
| 245.6 | 0.733 | 2.99 | -- | 0.089 | -- | -- | -- | 0.0691 | 2.56 | -- | -- | -- | -- |
| 222.99 | 0.695 | 2.97 | -- | -- | 1.09 | -- | -- | 0.182 | -- | 1002 | 5976 | -- | -- |
| 246.06 | 0.732 | 2.99 | -- | -- | -- | -- | -- | 0.0709 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 201.46 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 2 | 202.85 | wind | 9 | 4320 | < th | dose independent | rect. | 18 | 8 |
| 4 | 203.20 | wind | 7 | 4320 | < th | dose independent | rect. | 19 | 2 |
| 5 | 203.29 | wind | 9 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 7 | 203.38 | wind | 9 | 4320 | > th | dose independent | rect. | 18 | 4 |
| 10 | 203.40 | wind | 5 | 4320 | > th | dose dependent | rect. | 20 | 3 |
| 11 | 203.43 | wind | 9 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 14 | 203.51 | wind | 9 | 4320 | > th | dose independent | rect. | 18 | 8 |
| 25 | 203.60 | wind | 9 | 4320 | > th | dose dependent | rect. | 19 | 7 |
| 39 | 203.75 | wind | 9 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 133 | 205.61 | humidity | 90 | 1440 | < th | dose dependent | rect. | 24 | 7 |
| 153 | 206.73 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 156 | 206.73 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 185 | 207.13 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 245 | 208.55 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 10 | 9 |
| 247 | 208.57 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 8 | 11 |
| 264 | 208.70 | humidity | 90 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 328 | 209.47 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 352 | 209.66 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 1 |
| 359 | 209.78 | humidity | 80 | 1440 | < th | dose independent | rect. | 22 | 2 |
| 361 | 209.83 | radiation | 1 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 366 | 210.15 | humidity | 80 | 270 | < th | dose dependent | rect. | 23 | 8 |
| 369 | 210.24 | humidity | 80 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 448 | 211.62 | wind | 7 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 462 | 211.70 | humidity | 80 | 1440 | < th | dose dependent | rect. | 21 | 11 |
| 463 | 211.73 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 7 |
| 470 | 211.82 | humidity | 80 | 270 | < th | dose independent | rect. | 23 | 8 |
| 492 | 212.00 | humidity | 80 | 270 | < th | dose independent | rect. | 21 | 9 |
| 496 | 212.10 | wind | 7 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 501 | 212.17 | atmosphere | 995 | 14400 | < th | dose independent | sin | 22 | NA |
| 504 | 212.20 | atmosphere | 995 | 14400 | > th | dose independent | sin | 22 | NA |
| 512 | 212.25 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 527 | 212.29 | humidity | 70 | 1440 | > th | dose dependent | rect. | 2 | 2 |
| 561 | 212.55 | humidity | 80 | 10 | < th | dose independent | rect. | 20 | 11 |
| 570 | 212.61 | atmosphere | 995 | 14400 | < th | dose dependent | sin | 22 | NA |
| 611 | 212.81 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 1 | 1 |
| 621 | 212.81 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 19 | 21 |
| 623 | 212.81 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 670 | 212.89 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 715 | 212.98 | radiation | 1 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 736 | 213.05 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 747 | 213.09 | radiation | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 891 | 213.36 | humidity | 80 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 949 | 213.43 | atmosphere | 995 | 14400 | > th | dose independent | no | NA | NA |
| 952 | 213.43 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 10 | 23 |
| 953 | 213.43 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 954 | 213.43 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 14 | 23 |