Os05g0458000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, DHHC-type domain containing protein.
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Os05g0458000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, DHHC-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.16 | 0.312 | 7.19 | -0.274 | 0.635 | 0.792 | -0.173 | 1.71 | 0.132 | 5.75 | 45.38 | 2426 | -- | -- |
| 46.49 | 0.318 | 7.18 | -0.134 | 0.661 | 0.957 | -0.00207 | -- | 0.169 | 5.83 | 46.02 | 2581 | -- | -- |
| 44.07 | 0.309 | 7.18 | -0.277 | 0.679 | 0.79 | -- | 1.66 | 0.139 | 5.84 | 45 | 2538 | -- | -- |
| 46.44 | 0.317 | 7.18 | -0.107 | 0.679 | 0.968 | -- | -- | 0.178 | 5.82 | 44 | 2578 | -- | -- |
| 54.39 | 0.343 | 7.19 | -0.207 | -- | 0.951 | -- | 1.22 | 0.172 | -- | 61.76 | 639 | -- | -- |
| 60.78 | 0.365 | 7.19 | -0.113 | 0.686 | -- | 0.12 | -- | 0.109 | 6.66 | -- | -- | -- | -- |
| 60.81 | 0.365 | 7.19 | -0.112 | 0.687 | -- | -- | -- | 0.109 | 6.63 | -- | -- | -- | -- |
| 55.99 | 0.348 | 7.2 | -0.0757 | -- | 1.03 | -- | -- | 0.159 | -- | 57.93 | 584 | -- | -- |
| 46.75 | 0.318 | 7.17 | -- | 0.685 | 0.961 | -- | -- | 0.19 | 5.83 | 43.28 | 2582 | -- | -- |
| 85.41 | 0.432 | 7.2 | -0.0952 | -- | -- | -- | -- | 0.123 | -- | -- | -- | -- | -- |
| 61.14 | 0.366 | 7.19 | -- | 0.685 | -- | -- | -- | 0.121 | 6.64 | -- | -- | -- | -- |
| 56.16 | 0.349 | 7.2 | -- | -- | 1.04 | -- | -- | 0.159 | -- | 56.63 | 584 | -- | -- |
| 85.64 | 0.432 | 7.2 | -- | -- | -- | -- | -- | 0.133 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.06 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 17 |
| 5 | 41.39 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 14 | 41.70 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 18 |
| 15 | 41.70 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 18 |
| 19 | 41.73 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 20 | 41.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 17 |
| 22 | 41.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 22 | 23 |
| 23 | 41.73 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 22 | 23 |
| 24 | 41.73 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 22 | 23 |
| 46 | 41.78 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 47 | 41.78 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 21 |
| 48 | 41.78 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 21 |
| 49 | 41.78 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 21 |
| 50 | 41.79 | wind | 3.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 72 | 41.82 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 1 | 20 |
| 76 | 41.82 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 1 | 20 |
| 121 | 41.88 | wind | 3.0 | 43200 | > th | dose independent | rect. | 2 | 5 |
| 139 | 41.90 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 141 | 41.90 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 16 |
| 148 | 41.90 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 16 |
| 161 | 41.91 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 23 |
| 168 | 41.91 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 23 |
| 173 | 41.92 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 23 |
| 174 | 41.92 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 192 | 41.94 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 23 |
| 195 | 41.94 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 23 |
| 196 | 41.95 | precipitation | 0.1 | 14400 | > th | dose independent | no | NA | NA |
| 197 | 41.95 | precipitation | 0.1 | 14400 | < th | dose independent | no | NA | NA |
| 202 | 41.95 | precipitation | 0.1 | 14400 | < th | dose dependent | no | NA | NA |
| 207 | 41.96 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 2 | 23 |
| 208 | 41.96 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 2 | 23 |
| 212 | 41.96 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 2 | 23 |
| 239 | 41.99 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 23 | NA |
| 254 | 42.01 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 18 | NA |
| 259 | 42.02 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 268 | 42.02 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 4 |
| 271 | 42.02 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 22 | 22 |
| 330 | 42.07 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 10 |
| 362 | 42.12 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 23 |
| 370 | 42.13 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 23 |
| 375 | 42.13 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 23 |
| 376 | 42.14 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 383 | 42.15 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 13 | 12 |
| 387 | 42.17 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 5 |
| 427 | 42.22 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 4 | 19 |
| 429 | 42.22 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 430 | 42.22 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 7 |
| 436 | 42.23 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 5 |
| 441 | 42.24 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 11 |
| 468 | 42.28 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 471 | 42.28 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 474 | 42.29 | humidity | 90.0 | 14400 | > th | dose independent | sin | 18 | NA |
| 475 | 42.29 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 542 | 42.40 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 15 | NA |
| 547 | 42.40 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 2 | NA |
| 548 | 42.40 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 15 | NA |
| 554 | 42.42 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 15 | NA |
| 568 | 42.44 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 16 | 2 |
| 569 | 42.44 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 14 | 5 |
| 611 | 42.52 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 12 |
| 633 | 42.53 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 638 | 42.54 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 5 |
| 647 | 42.55 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 8 |
| 659 | 42.58 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 661 | 42.58 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 16 | 2 |
| 664 | 42.58 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 668 | 42.59 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 16 |
| 674 | 42.60 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 0 | NA |
| 680 | 42.61 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 689 | 42.62 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 707 | 42.64 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 15 |
| 713 | 42.64 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 719 | 42.65 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 0 | NA |
| 721 | 42.65 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 0 | NA |
| 722 | 42.65 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 2 |
| 727 | 42.66 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 732 | 42.66 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 835 | 42.77 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 842 | 42.78 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 992 | 42.89 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 7 |