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Os05g0457800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Glycerol-3-phosphate acyltransferase 5 (EC 2.3.1.15) (AtGPAT5).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.58 (0.0263) R2 : 0.718
β1 : 1.31 (0.096) R2dD : 0.119 R2D : 0.0516
β2 : 1.99 (0.0656) R2dC : 0.574 R2C : 0.557
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.526 (0.056) R2dN8 : 0.0731 R2N8 : 0.025
σ : 0.493
deviance : 110.94
__
_____
C
peak time of C : 8.68
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
100.68 0.471 9.54 1.54 2.01 0.649 0.0952 -1.52 0.61 8.77 20.6 131 -- --
101.82 0.47 9.55 1.51 2 1.27 0.098 -- 0.605 8.81 19.97 133 -- --
100.71 0.467 9.54 1.54 2.01 0.65 -- -1.53 0.611 8.77 20.6 131 -- --
101.84 0.47 9.56 1.52 2 1.26 -- -- 0.605 8.8 20.01 124 -- --
262.69 0.755 9.53 2.06 -- 2.18 -- -1.37 0.925 -- 47.89 615 -- --
110.77 0.493 9.58 1.3 1.99 -- 0.228 -- 0.526 8.68 -- -- -- --
110.94 0.493 9.58 1.31 1.99 -- -- -- 0.526 8.68 -- -- -- --
264.11 0.757 9.56 1.82 -- 2.15 -- -- 0.861 -- 201.4 618 -- --
155.46 0.581 9.61 -- 2 -0.275 -- -- 0.365 8.66 20.2 1050 -- --
335.51 0.856 9.63 1.31 -- -- -- -- 0.543 -- -- -- -- --
156.11 0.584 9.61 -- 2 -- -- -- 0.38 8.63 -- -- -- --
343.98 0.864 9.62 -- -- 1.48 -- -- 0.577 -- 212.9 594 -- --
381.04 0.911 9.66 -- -- -- -- -- 0.397 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 96.15 atmosphere 995.0 10 > th dose dependent rect. 5 20
2 96.40 atmosphere 1000.0 10 > th dose independent rect. 5 20
3 96.72 temperature 15.0 10 > th dose dependent rect. 8 21
5 96.81 temperature 30.0 90 < th dose dependent rect. 4 21
7 96.95 atmosphere 995.0 10 > th dose dependent rect. 5 22
12 97.17 atmosphere 1000.0 30 > th dose dependent rect. 18 14
16 97.24 atmosphere 1015.0 10 < th dose dependent rect. 8 21
18 97.26 humidity 70.0 14400 > th dose dependent rect. 22 10
31 97.37 temperature 15.0 90 > th dose dependent rect. 9 19
36 97.43 radiation 1.0 30 > th dose independent sin 6 NA
42 97.46 atmosphere 1015.0 90 < th dose dependent rect. 9 20
58 97.72 precipitation 0.1 270 > th dose independent rect. 2 2
59 97.72 precipitation 0.1 270 > th dose dependent rect. 2 2
86 97.95 humidity 80.0 14400 > th dose dependent rect. 3 5
105 98.12 radiation 1.0 1440 < th dose independent rect. 10 2
106 98.12 radiation 1.0 1440 < th dose dependent rect. 10 2
109 98.14 temperature 20.0 90 > th dose independent rect. 9 20
116 98.21 temperature 20.0 90 > th dose independent rect. 7 22
158 98.48 humidity 50.0 14400 > th dose dependent rect. 21 6
162 98.51 humidity 50.0 14400 > th dose dependent rect. 22 4
166 98.52 radiation 1.0 30 < th dose independent sin 6 NA
168 98.52 atmosphere 1000.0 10 > th dose independent rect. 5 22
180 98.54 radiation 1.0 1440 < th dose independent rect. 8 7
181 98.54 radiation 1.0 1440 < th dose dependent rect. 8 7
189 98.57 radiation 1.0 30 < th dose dependent sin 5 NA
200 98.60 atmosphere 1010.0 10 < th dose independent rect. 8 21
209 98.65 humidity 90.0 14400 < th dose dependent rect. 22 3
227 98.70 temperature 20.0 10 > th dose independent rect. 1 4
243 98.74 atmosphere 1015.0 10 < th dose dependent rect. 20 9
252 98.77 humidity 80.0 14400 > th dose dependent rect. 6 1
280 98.87 radiation 1.0 30 < th dose independent rect. 1 16
294 98.91 radiation 1.0 1440 > th dose independent rect. 8 7
297 98.94 temperature 20.0 10 > th dose independent rect. 8 21
307 98.97 temperature 20.0 10 > th dose independent rect. 10 19
330 99.03 radiation 20.0 4320 > th dose independent rect. 6 2
354 99.07 temperature 20.0 90 > th dose independent rect. 1 4
357 99.07 radiation 1.0 30 < th dose dependent rect. 1 16
413 99.28 radiation 30.0 4320 < th dose independent rect. 2 6
428 99.33 radiation 30.0 4320 < th dose independent rect. 21 11
433 99.35 precipitation 0.1 270 > th dose independent rect. 23 5
434 99.35 temperature 20.0 10 > th dose independent rect. 20 9
439 99.36 temperature 20.0 90 > th dose independent rect. 23 6
455 99.40 radiation 30.0 4320 < th dose independent rect. 17 15
458 99.41 humidity 70.0 14400 > th dose dependent sin 9 NA
459 99.41 wind 9.0 14400 > th dose dependent rect. 14 1
468 99.46 precipitation 0.1 270 > th dose dependent rect. 23 5
477 99.48 radiation 30.0 4320 < th dose independent rect. 6 2
480 99.49 atmosphere 1000.0 270 > th dose independent rect. 2 22
548 99.65 radiation 1.0 30 < th dose independent rect. 1 13
554 99.66 radiation 20.0 4320 > th dose dependent rect. 6 2
568 99.67 temperature 20.0 270 > th dose independent rect. 23 3
579 99.71 wind 7.0 1440 < th dose independent rect. 7 1
584 99.73 temperature 15.0 10 > th dose dependent rect. 20 9
589 99.76 radiation 1.0 4320 > th dose independent rect. 4 1
600 99.76 radiation 1.0 4320 > th dose dependent rect. 4 1
620 99.79 radiation 1.0 10 < th dose independent rect. 1 5
637 99.84 atmosphere 1015.0 10 < th dose dependent rect. 14 15
645 99.86 radiation 1.0 30 < th dose dependent rect. 1 13
650 99.87 humidity 90.0 14400 < th dose independent rect. 6 1
674 99.92 temperature 20.0 270 > th dose independent rect. 22 17
683 99.93 humidity 90.0 90 < th dose independent rect. 9 9
694 99.97 humidity 70.0 43200 < th dose dependent rect. 10 1
702 99.99 radiation 1.0 30 < th dose independent rect. 1 11
708 100.00 radiation 1.0 30 < th dose independent rect. 1 7
712 100.00 radiation 1.0 30 < th dose dependent rect. 1 5
733 100.03 atmosphere 1015.0 10 < th dose dependent rect. 16 13
734 100.04 radiation 1.0 1440 < th dose independent rect. 14 1
736 100.04 radiation 1.0 1440 < th dose dependent rect. 14 1
738 100.04 atmosphere 995.0 10 > th dose dependent rect. 5 15
742 100.07 humidity 60.0 14400 > th dose independent rect. 7 1
743 100.07 radiation 1.0 1440 > th dose independent rect. 9 1
744 100.07 radiation 1.0 1440 > th dose independent rect. 13 2
750 100.08 humidity 70.0 43200 < th dose dependent rect. 8 4
751 100.08 humidity 70.0 43200 < th dose dependent rect. 6 6
757 100.09 humidity 90.0 14400 < th dose dependent rect. 21 10
761 100.09 atmosphere 995.0 270 > th dose dependent rect. 2 21
780 100.14 atmosphere 995.0 10 > th dose dependent rect. 5 8
789 100.16 atmosphere 1010.0 10 < th dose independent rect. 1 17
794 100.17 temperature 20.0 90 > th dose independent rect. 13 16
810 100.20 radiation 1.0 30 < th dose dependent rect. 1 11
820 100.22 atmosphere 1015.0 90 < th dose dependent rect. 23 6
843 100.28 humidity 60.0 43200 > th dose independent rect. 20 17
854 100.30 humidity 60.0 43200 > th dose independent sin 7 NA
855 100.30 temperature 15.0 270 > th dose independent rect. 23 15
859 100.30 temperature 30.0 90 < th dose dependent rect. 17 19
866 100.32 atmosphere 995.0 43200 < th dose independent rect. 4 10
867 100.32 humidity 60.0 43200 > th dose independent rect. 2 11
874 100.33 atmosphere 995.0 43200 > th dose independent rect. 4 10
887 100.34 atmosphere 995.0 43200 < th dose dependent rect. 1 14
896 100.35 atmosphere 995.0 43200 < th dose dependent rect. 10 16
900 100.36 temperature 20.0 10 > th dose independent rect. 14 15
940 100.42 humidity 60.0 43200 < th dose independent sin 6 NA
947 100.42 atmosphere 995.0 43200 < th dose dependent rect. 9 18
953 100.43 atmosphere 1015.0 10 < th dose dependent rect. 24 5
961 100.44 humidity 90.0 14400 > th dose independent rect. 6 1
975 100.45 atmosphere 995.0 43200 < th dose dependent sin 5 NA
996 100.46 humidity 90.0 14400 < th dose independent rect. 4 4