Os05g0455400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0455400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 118.62 | 0.512 | 14 | -0.319 | 0.377 | -1.23 | 1.83 | 0.161 | -0.153 | 13.2 | 21.42 | 74 | -- | -- |
| 118.2 | 0.506 | 14 | -0.303 | 0.319 | -1.23 | 1.7 | -- | -0.157 | 13.5 | 17.95 | 63 | -- | -- |
| 121.96 | 0.514 | 14 | -0.29 | 0.333 | -1.21 | -- | -1.21 | -0.144 | 13.4 | 18.03 | 63 | -- | -- |
| 129.87 | 0.531 | 14 | -0.259 | 0.346 | -1.27 | -- | -- | -0.146 | 13.4 | 21.79 | 63 | -- | -- |
| 123.35 | 0.517 | 14 | -0.292 | -- | -1.44 | -- | -1.14 | -0.156 | -- | 16.37 | 73 | -- | -- |
| 144.18 | 0.563 | 14 | -0.273 | 1.58 | -- | 1.76 | -- | -0.0708 | 12.7 | -- | -- | -- | -- |
| 157.4 | 0.588 | 14 | -0.208 | 1.58 | -- | -- | -- | -0.062 | 12.7 | -- | -- | -- | -- |
| 131.28 | 0.534 | 14 | -0.262 | -- | -1.47 | -- | -- | -0.167 | -- | 17.2 | 73 | -- | -- |
| 131.63 | 0.534 | 14 | -- | 0.353 | -1.26 | -- | -- | -0.12 | 13.4 | 21.62 | 63 | -- | -- |
| 313.56 | 0.827 | 14 | -0.264 | -- | -- | -- | -- | -0.0899 | -- | -- | -- | -- | -- |
| 158.54 | 0.589 | 14 | -- | 1.58 | -- | -- | -- | -0.0389 | 12.7 | -- | -- | -- | -- |
| 133.02 | 0.537 | 14 | -- | -- | -1.47 | -- | -- | -0.137 | -- | 16.9 | 70 | -- | -- |
| 315.4 | 0.829 | 14 | -- | -- | -- | -- | -- | -0.0606 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 115.79 | humidity | 70.0 | 10 | > th | dose dependent | sin | 0 | NA |
| 2 | 116.01 | radiation | 10.0 | 90 | < th | dose dependent | sin | 0 | NA |
| 6 | 116.78 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 7 | 116.79 | radiation | 1.0 | 90 | < th | dose independent | sin | 0 | NA |
| 8 | 116.87 | radiation | 1.0 | 90 | > th | dose independent | sin | 0 | NA |
| 12 | 117.36 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 14 |
| 13 | 117.41 | humidity | 80.0 | 30 | < th | dose independent | rect. | 7 | 10 |
| 19 | 118.14 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 29 | 118.86 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 13 | 20 |
| 32 | 118.92 | wind | 1.0 | 43200 | < th | dose independent | rect. | 16 | 10 |
| 33 | 118.94 | wind | 1.0 | 43200 | < th | dose independent | rect. | 15 | 12 |
| 37 | 119.01 | humidity | 80.0 | 30 | < th | dose independent | rect. | 9 | 8 |
| 53 | 119.34 | wind | 1.0 | 43200 | > th | dose independent | rect. | 16 | 10 |
| 60 | 119.45 | wind | 1.0 | 43200 | < th | dose independent | sin | 16 | NA |
| 63 | 119.49 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 76 | 119.71 | humidity | 80.0 | 30 | < th | dose independent | rect. | 2 | 15 |
| 79 | 119.76 | humidity | 80.0 | 30 | < th | dose independent | rect. | 24 | 17 |
| 81 | 119.79 | wind | 1.0 | 43200 | < th | dose dependent | sin | 17 | NA |
| 86 | 119.86 | humidity | 80.0 | 10 | < th | dose independent | rect. | 22 | 19 |
| 97 | 120.05 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 13 |
| 101 | 120.10 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 107 | 120.22 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 113 | 120.29 | radiation | 1.0 | 270 | > th | dose independent | rect. | 18 | 21 |
| 116 | 120.31 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 3 | 18 |
| 117 | 120.33 | wind | 1.0 | 43200 | > th | dose independent | rect. | 18 | 8 |
| 119 | 120.35 | wind | 1.0 | 43200 | > th | dose independent | sin | 16 | NA |
| 136 | 120.53 | radiation | 1.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 154 | 120.61 | wind | 1.0 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 156 | 120.61 | radiation | 20.0 | 90 | < th | dose dependent | no | NA | NA |
| 158 | 120.63 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 6 | 15 |
| 160 | 120.63 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 171 | 120.71 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 17 |
| 177 | 120.76 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 11 | 9 |
| 187 | 120.86 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 190 | 120.88 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 201 | 120.99 | radiation | 10.0 | 90 | > th | dose independent | rect. | 9 | 23 |
| 235 | 121.21 | humidity | 80.0 | 10 | > th | dose independent | sin | 0 | NA |
| 242 | 121.24 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 21 | 20 |
| 248 | 121.28 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 22 | 18 |
| 270 | 121.42 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 5 |
| 271 | 121.44 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 278 | 121.47 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 19 | 19 |
| 283 | 121.50 | radiation | 10.0 | 90 | > th | dose independent | rect. | 17 | 23 |
| 309 | 121.62 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 9 | 11 |
| 340 | 121.77 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 6 | 10 |
| 342 | 121.78 | humidity | 80.0 | 10 | < th | dose independent | sin | 1 | NA |
| 345 | 121.79 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 22 | 11 |
| 364 | 121.81 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 379 | 121.88 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 10 | 10 |
| 435 | 122.06 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 18 |
| 442 | 122.09 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 2 |
| 447 | 122.11 | wind | 1.0 | 43200 | < th | dose independent | rect. | 10 | 18 |
| 454 | 122.14 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 21 | 12 |
| 459 | 122.17 | radiation | 20.0 | 90 | < th | dose independent | rect. | 13 | 8 |
| 514 | 122.35 | radiation | 10.0 | 90 | > th | dose independent | no | NA | NA |
| 600 | 122.37 | humidity | 70.0 | 10 | > th | dose independent | rect. | 2 | 19 |
| 604 | 122.40 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 22 | 2 |
| 666 | 122.63 | humidity | 80.0 | 270 | < th | dose independent | rect. | 19 | 20 |
| 671 | 122.64 | wind | 1.0 | 43200 | > th | dose independent | rect. | 11 | 15 |
| 705 | 122.73 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 806 | 123.02 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 4 |
| 850 | 123.19 | wind | 1.0 | 14400 | < th | dose independent | rect. | 8 | 17 |
| 851 | 123.19 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 20 |
| 855 | 123.19 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 20 |
| 885 | 123.28 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 944 | 123.42 | humidity | 90.0 | 10 | < th | dose dependent | sin | 2 | NA |
| 965 | 123.48 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 986 | 123.53 | wind | 1.0 | 43200 | < th | dose independent | rect. | 10 | 2 |