Os05g0453500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0453500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 143.56 | 0.563 | 9.32 | 0.273 | 0.841 | 3.44 | 1.54 | 0.0896 | 0.502 | 17.4 | 0.822 | 261 | 12.1 | 6.78 |
| 143.13 | 0.557 | 9.31 | 0.256 | 0.814 | 3.47 | 1.47 | -- | 0.519 | 17.3 | 1.907 | 258 | 12.2 | 6.67 |
| 144.61 | 0.56 | 9.3 | 0.322 | 0.84 | 3.44 | -- | 1.05 | 0.551 | 17.1 | 2.253 | 236 | 12.4 | 6.48 |
| 147.63 | 0.566 | 9.31 | 0.233 | 0.961 | 3.4 | -- | -- | 0.536 | 17.4 | 5.263 | 234 | 12.5 | 6.35 |
| 158.16 | 0.586 | 9.32 | 0.3 | -- | 4.03 | -- | 1.43 | 0.456 | -- | 2.559 | 259 | 12.1 | 6.92 |
| 360.94 | 0.891 | 9.34 | 0.381 | 3.95 | -- | 1.49 | -- | 0.728 | 17.8 | -- | -- | -- | -- |
| 366.4 | 0.896 | 9.33 | 0.371 | 3.96 | -- | -- | -- | 0.734 | 17.8 | -- | -- | -- | -- |
| 156.84 | 0.583 | 9.31 | 0.217 | -- | 4.17 | -- | -- | 0.485 | -- | 5.596 | 291 | 11.7 | 6.93 |
| 149.11 | 0.569 | 9.32 | -- | 1.01 | 3.35 | -- | -- | 0.516 | 17.5 | 9.567 | 232 | 12.5 | 6.32 |
| 1178.58 | 1.6 | 9.27 | 0.25 | -- | -- | -- | -- | 0.641 | -- | -- | -- | -- | -- |
| 370.03 | 0.9 | 9.34 | -- | 3.95 | -- | -- | -- | 0.693 | 17.8 | -- | -- | -- | -- |
| 158.15 | 0.586 | 9.31 | -- | -- | 4.16 | -- | -- | 0.465 | -- | 4.951 | 290 | 11.7 | 6.98 |
| 1180.22 | 1.6 | 9.28 | -- | -- | -- | -- | -- | 0.614 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 145.96 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 17 |
| 2 | 146.02 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 7 |
| 3 | 146.02 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 7 |
| 4 | 146.15 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 7 |
| 5 | 146.26 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 7 |
| 7 | 146.26 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 12 | 7 |
| 8 | 146.26 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 17 |
| 9 | 146.26 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 17 |
| 11 | 146.64 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 17 |
| 12 | 146.64 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 17 |
| 13 | 149.02 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 7 |
| 15 | 149.72 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 16 | 149.96 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 23 | 9 |
| 17 | 150.18 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 17 |
| 32 | 152.60 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 33 | 152.93 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 6 |
| 34 | 152.93 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 36 | 153.21 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 37 | 153.21 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 38 | 153.21 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 18 |
| 39 | 153.41 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 41 | 153.46 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 42 | 153.74 | radiation | 30.0 | 270 | < th | dose independent | rect. | 23 | 9 |
| 43 | 153.97 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 17 |
| 45 | 154.45 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 7 |
| 49 | 155.02 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 9 |
| 50 | 155.02 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 9 |
| 51 | 155.02 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 9 |
| 53 | 155.02 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 9 |
| 54 | 155.02 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 15 |
| 55 | 155.06 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 9 |
| 64 | 157.12 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 9 |
| 65 | 157.12 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 9 |
| 73 | 157.58 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 18 |
| 74 | 157.58 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 18 |
| 78 | 158.21 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 83 | 158.49 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 89 | 159.16 | wind | 9.0 | 270 | < th | dose independent | rect. | 8 | 15 |
| 90 | 159.28 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 9 |
| 105 | 161.31 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 15 |
| 106 | 161.31 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 15 |
| 107 | 161.85 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 18 |
| 109 | 162.24 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 7 |
| 112 | 162.60 | radiation | 1.0 | 270 | > th | dose independent | rect. | 12 | 18 |
| 137 | 164.42 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 143 | 165.16 | wind | 9.0 | 270 | < th | dose dependent | rect. | 23 | 9 |
| 147 | 165.35 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 157 | 165.99 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 14 | 6 |
| 158 | 165.99 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 14 | 6 |
| 176 | 166.75 | radiation | 40.0 | 90 | < th | dose independent | rect. | 13 | 6 |
| 180 | 166.88 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 23 | 9 |
| 186 | 167.73 | wind | 1.0 | 10 | > th | dose independent | rect. | 14 | 6 |
| 190 | 167.93 | temperature | 10.0 | 10 | > th | dose independent | rect. | 14 | 6 |
| 192 | 167.93 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 14 | 6 |
| 194 | 167.93 | temperature | 10.0 | 10 | > th | dose independent | rect. | 20 | 18 |
| 195 | 167.93 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 20 | 18 |
| 196 | 168.00 | radiation | 10.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 197 | 168.04 | wind | 9.0 | 10 | < th | dose independent | rect. | 20 | 18 |
| 198 | 168.09 | radiation | 40.0 | 10 | < th | dose independent | rect. | 14 | 6 |
| 213 | 169.09 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 19 |
| 215 | 169.10 | humidity | 90.0 | 270 | < th | dose independent | rect. | 12 | 6 |
| 217 | 169.32 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 221 | 169.32 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 222 | 169.32 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 224 | 169.43 | wind | 9.0 | 10 | < th | dose independent | rect. | 14 | 6 |
| 226 | 169.45 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 242 | 170.53 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 262 | 171.24 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 9 |
| 299 | 172.13 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 20 | 18 |
| 300 | 172.13 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 20 | 18 |
| 329 | 172.91 | radiation | 40.0 | 270 | < th | dose independent | rect. | 13 | 4 |
| 333 | 172.98 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 14 | 6 |
| 334 | 172.99 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 14 | 6 |
| 340 | 173.24 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 15 |
| 341 | 173.24 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 15 |
| 350 | 173.69 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 411 | 174.70 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 9 |
| 412 | 174.70 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 425 | 174.84 | wind | 1.0 | 270 | > th | dose independent | rect. | 8 | 15 |
| 475 | 175.66 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 19 | 17 |
| 488 | 175.86 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 523 | 176.71 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 528 | 176.89 | wind | 1.0 | 270 | > th | dose independent | rect. | 18 | 8 |
| 559 | 177.86 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 583 | 178.32 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 602 | 178.84 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 6 |
| 605 | 178.84 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 18 |
| 611 | 179.09 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 15 |
| 618 | 179.24 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 14 | 19 |
| 669 | 180.06 | radiation | 40.0 | 90 | < th | dose independent | rect. | 13 | 20 |
| 699 | 180.53 | humidity | 90.0 | 90 | < th | dose independent | rect. | 9 | 5 |
| 771 | 183.28 | radiation | 1.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 788 | 184.12 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 8 | 15 |
| 814 | 184.65 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 12 | 6 |
| 857 | 185.61 | radiation | 1.0 | 270 | < th | dose dependent | sin | 16 | NA |
| 868 | 185.86 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 8 | 15 |
| 889 | 186.79 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 18 |
| 896 | 186.92 | radiation | 40.0 | 10 | < th | dose independent | rect. | 14 | 19 |
| 910 | 187.20 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 13 | 7 |
| 940 | 187.73 | radiation | 1.0 | 270 | < th | dose independent | sin | 15 | NA |
| 942 | 187.74 | radiation | 1.0 | 270 | > th | dose independent | sin | 15 | NA |
| 985 | 188.46 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 987 | 188.46 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 988 | 188.46 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 9 | 5 |
| 989 | 188.46 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 5 |
| 990 | 188.46 | temperature | 10.0 | 10 | > th | dose independent | rect. | 14 | 19 |
| 991 | 188.46 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 5 |