Os05g0452600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ribosomal protein L33.
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Os05g0452600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ribosomal protein L33.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.2 | 0.339 | 8.66 | -0.995 | 0.536 | -1.69 | 0.566 | -1.54 | -0.396 | 1.92 | 28.05 | 34 | -- | -- |
| 54.85 | 0.345 | 8.69 | -1.28 | 0.578 | -1.86 | 0.251 | -- | -0.431 | 2.16 | 32.12 | 32 | -- | -- |
| 52.98 | 0.339 | 8.67 | -1.09 | 0.536 | -1.67 | -- | -1.09 | -0.418 | 2.25 | 28.05 | 34 | -- | -- |
| 54.63 | 0.344 | 8.68 | -1.29 | 0.579 | -1.8 | -- | -- | -0.393 | 2.24 | 32.09 | 32 | -- | -- |
| 61.92 | 0.366 | 8.64 | -0.949 | -- | -1.4 | -- | -1.49 | -0.338 | -- | 26.21 | 388 | -- | -- |
| 89.9 | 0.445 | 8.61 | -0.85 | 0.00836 | -- | 0.927 | -- | -0.111 | 18.6 | -- | -- | -- | -- |
| 92.06 | 0.449 | 8.61 | -0.865 | 0.0158 | -- | -- | -- | -0.108 | 21.5 | -- | -- | -- | -- |
| 55.87 | 0.348 | 8.67 | -1.33 | -- | -1.45 | -- | -- | -0.379 | -- | 38.46 | 1520 | -- | -- |
| 92.15 | 0.45 | 8.63 | -- | 0.373 | -1.22 | -- | -- | -0.182 | 2.05 | 32.09 | 32 | -- | -- |
| 92.07 | 0.448 | 8.61 | -0.865 | -- | -- | -- | -- | -0.108 | -- | -- | -- | -- | -- |
| 111.77 | 0.495 | 8.59 | -- | 0.0225 | -- | -- | -- | -0.0118 | 18.2 | -- | -- | -- | -- |
| 96.21 | 0.457 | 8.62 | -- | -- | -0.885 | -- | -- | -0.145 | -- | 48.38 | 1467 | -- | -- |
| 111.8 | 0.494 | 8.59 | -- | -- | -- | -- | -- | -0.0123 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.27 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 3 | 52.70 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 19 |
| 5 | 52.73 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 20 |
| 19 | 52.86 | temperature | 20 | 1440 | > th | dose dependent | sin | 12 | NA |
| 41 | 52.93 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 14 |
| 76 | 53.00 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 10 |
| 121 | 53.07 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 146 | 53.11 | temperature | 30 | 1440 | < th | dose dependent | sin | 13 | NA |
| 177 | 53.14 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 187 | 53.14 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 215 | 53.18 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 294 | 53.26 | temperature | 15 | 1440 | > th | dose dependent | rect. | 9 | 22 |
| 310 | 53.28 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 331 | 53.29 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 418 | 53.40 | temperature | 15 | 1440 | > th | dose dependent | no | NA | NA |
| 426 | 53.40 | temperature | 30 | 1440 | < th | dose dependent | rect. | 9 | 22 |
| 473 | 53.45 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 489 | 53.46 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 504 | 53.47 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 548 | 53.51 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 557 | 53.52 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 558 | 53.52 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 565 | 53.53 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 603 | 53.55 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 606 | 53.56 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 671 | 53.62 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 726 | 53.67 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 913 | 53.90 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |