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Os05g0451200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.0251) R2 : 0.663
β1 : -2.33 (0.092) R2dD : 0.494 R2D : 0.412
β2 : 0.97 (0.0595) R2dC : 0.197 R2C : 0.171
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.388 (0.0536) R2dN8 : 0.0517 R2N8 : -0.0161
σ : 0.472
deviance : 101.75
__
_____
C
peak time of C : 0.0505
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
90.94 0.448 11.2 -2.34 0.112 0.709 -1.7 1.46 -0.389 22 0.1734 33 -- --
91.44 0.449 11.1 -2.27 0.17 0.743 0.774 -- -0.341 4.44 0.1734 33 -- --
92.3 0.451 11.2 -2.29 0.303 0.601 -- 0.171 -0.348 1.53 0.1433 33 -- --
92.49 0.451 11.2 -2.28 0.289 0.613 -- -- -0.35 1.6 0.1627 32 -- --
94.5 0.455 11.2 -2.27 -- 0.778 -- 0.153 -0.346 -- 0.2033 37 -- --
101.55 0.472 11.2 -2.33 0.971 -- 0.215 -- -0.387 0.0843 -- -- -- --
101.75 0.472 11.2 -2.33 0.97 -- -- -- -0.388 0.0505 -- -- -- --
94.11 0.452 11.2 -2.27 -- 0.785 -- -- -0.341 -- 0.1525 32 -- --
228.93 0.709 11.1 -- 0.118 0.814 -- -- -0.0855 5.91 0.1627 32 -- --
161.01 0.593 11.2 -2.3 -- -- -- -- -0.374 -- -- -- -- --
245.39 0.733 11.1 -- 0.94 -- -- -- -0.128 23.9 -- -- -- --
225.65 0.7 11.1 -- -- 0.846 -- -- -0.102 -- 0.009999 33 -- --
301.04 0.81 11.1 -- -- -- -- -- -0.118 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 82.43 precipitation 0.1 720 < th dose independent rect. 7 21
2 82.43 precipitation 0.1 720 < th dose dependent rect. 7 21
3 83.36 temperature 10.0 720 > th dose dependent rect. 4 3
6 83.61 humidity 50.0 720 > th dose dependent rect. 19 5
8 84.31 precipitation 0.1 720 < th dose independent rect. 7 12
9 84.31 precipitation 0.1 720 < th dose dependent rect. 7 12
11 84.57 precipitation 0.1 720 < th dose independent rect. 16 3
12 84.57 precipitation 0.1 720 < th dose dependent rect. 16 3
14 84.69 temperature 10.0 30 > th dose dependent rect. 18 11
15 84.73 temperature 15.0 30 > th dose independent rect. 18 11
16 84.74 wind 9.0 4320 < th dose independent rect. 6 2
18 84.85 precipitation 0.1 720 < th dose independent rect. 16 19
19 84.85 precipitation 0.1 720 < th dose dependent rect. 16 19
22 85.10 precipitation 0.1 720 < th dose independent rect. 15 13
24 85.10 precipitation 0.1 720 < th dose dependent rect. 15 13
25 85.30 humidity 50.0 720 > th dose dependent rect. 19 12
26 85.33 wind 7.0 30 < th dose independent rect. 18 11
27 85.39 humidity 70.0 720 > th dose independent rect. 19 12
28 85.41 wind 9.0 30 < th dose independent rect. 5 13
29 85.53 temperature 10.0 720 > th dose dependent rect. 16 3
32 85.56 radiation 10.0 30 < th dose dependent rect. 18 11
37 85.62 temperature 10.0 1440 > th dose independent rect. 19 11
40 85.62 temperature 30.0 1440 < th dose independent rect. 19 11
44 85.62 humidity 50.0 1440 > th dose independent rect. 19 11
46 85.62 atmosphere 995.0 1440 > th dose independent rect. 19 11
47 85.62 radiation 20.0 1440 < th dose independent rect. 19 11
56 85.62 temperature 10.0 1440 > th dose independent rect. 6 13
62 85.64 humidity 50.0 30 > th dose independent rect. 18 11
63 85.64 atmosphere 995.0 30 > th dose independent rect. 18 11
64 85.64 radiation 20.0 30 < th dose independent rect. 18 11
67 85.64 temperature 10.0 30 > th dose independent rect. 5 13
69 85.64 atmosphere 1015.0 30 < th dose independent rect. 5 13
75 85.76 radiation 10.0 90 < th dose dependent rect. 5 2
78 85.80 precipitation 0.1 720 < th dose independent rect. 24 19
80 85.80 precipitation 0.1 720 < th dose dependent rect. 24 19
82 85.82 precipitation 0.1 30 < th dose independent rect. 18 11
84 85.82 precipitation 0.1 30 < th dose dependent rect. 18 11
86 85.89 precipitation 0.1 30 < th dose independent rect. 5 13
87 85.89 precipitation 0.1 30 < th dose dependent rect. 5 13
96 86.17 radiation 1.0 720 < th dose dependent rect. 17 7
97 86.19 precipitation 0.1 720 < th dose independent rect. 13 15
98 86.19 precipitation 0.1 720 < th dose dependent rect. 13 15
99 86.22 temperature 10.0 30 > th dose dependent rect. 5 13
103 86.31 temperature 10.0 1440 > th dose independent rect. 6 2
106 86.31 temperature 30.0 1440 < th dose independent rect. 6 2
110 86.31 humidity 50.0 1440 > th dose independent rect. 6 2
115 86.31 atmosphere 995.0 1440 > th dose independent rect. 6 2
116 86.31 atmosphere 1015.0 1440 < th dose independent rect. 6 2
117 86.31 temperature 10.0 1440 > th dose independent rect. 8 22
120 86.34 radiation 1.0 720 > th dose independent rect. 16 3
131 86.36 atmosphere 1015.0 30 < th dose independent rect. 18 11
132 86.37 wind 1.0 90 > th dose independent rect. 4 3
133 86.37 wind 1.0 720 > th dose independent rect. 16 3
140 86.47 precipitation 0.1 720 < th dose independent rect. 7 14
141 86.47 precipitation 0.1 720 < th dose dependent rect. 7 14
152 86.56 humidity 80.0 90 > th dose dependent rect. 5 2
200 87.03 atmosphere 1015.0 90 < th dose dependent rect. 5 2
207 87.05 atmosphere 1015.0 720 < th dose independent rect. 7 12
210 87.06 humidity 50.0 720 > th dose dependent rect. 4 3
220 87.15 precipitation 0.1 720 < th dose independent rect. 16 9
221 87.15 precipitation 0.1 720 < th dose dependent rect. 16 9
223 87.19 temperature 15.0 720 > th dose independent rect. 16 3
227 87.22 humidity 90.0 720 < th dose independent rect. 16 3
231 87.24 temperature 30.0 90 < th dose independent rect. 7 22
238 87.31 precipitation 0.1 720 < th dose independent rect. 9 10
239 87.31 precipitation 0.1 720 < th dose dependent rect. 9 10
244 87.34 wind 9.0 720 < th dose independent rect. 19 12
245 87.36 humidity 70.0 720 > th dose dependent rect. 5 1
252 87.44 radiation 20.0 720 < th dose independent rect. 4 3
259 87.50 wind 9.0 720 < th dose independent rect. 16 3
260 87.51 wind 1.0 90 > th dose independent rect. 4 13
263 87.54 atmosphere 995.0 30 > th dose independent rect. 5 13
277 87.62 radiation 1.0 720 < th dose independent rect. 17 7
295 87.68 atmosphere 995.0 90 > th dose independent rect. 7 22
298 87.73 wind 9.0 720 < th dose independent rect. 7 12
300 87.76 humidity 70.0 720 > th dose independent rect. 4 3
304 87.79 atmosphere 1010.0 90 < th dose independent rect. 5 2
310 87.82 wind 9.0 720 < th dose independent rect. 4 3
311 87.82 temperature 10.0 720 > th dose independent rect. 4 3
312 87.82 temperature 30.0 720 < th dose independent rect. 4 3
313 87.82 humidity 50.0 720 > th dose independent rect. 4 3
315 87.82 atmosphere 995.0 720 > th dose independent rect. 4 3
316 87.82 atmosphere 1015.0 720 < th dose independent rect. 4 3
320 87.83 humidity 80.0 90 > th dose independent rect. 5 2
328 87.89 wind 1.0 10 > th dose independent rect. 4 14
333 87.91 wind 9.0 720 < th dose independent rect. 7 21
342 87.97 wind 1.0 270 > th dose independent rect. 4 1
356 88.02 atmosphere 1015.0 720 < th dose independent rect. 16 3
357 88.02 radiation 40.0 720 < th dose independent rect. 16 3
359 88.02 temperature 10.0 720 > th dose independent rect. 19 21
360 88.02 temperature 30.0 90 < th dose dependent rect. 5 2
365 88.07 radiation 20.0 90 < th dose independent rect. 5 2
372 88.09 radiation 40.0 720 < th dose independent rect. 16 18
375 88.11 humidity 70.0 720 > th dose independent rect. 19 5
425 88.32 wind 7.0 90 < th dose independent rect. 5 2
427 88.32 temperature 10.0 90 > th dose independent rect. 5 2
429 88.32 temperature 30.0 90 < th dose independent rect. 5 2
430 88.32 humidity 50.0 90 > th dose independent rect. 5 2
432 88.32 atmosphere 995.0 90 > th dose independent rect. 5 2
435 88.32 temperature 10.0 90 > th dose independent rect. 7 22
437 88.35 precipitation 0.1 90 < th dose independent rect. 7 22
438 88.35 precipitation 0.1 90 < th dose dependent rect. 7 22
441 88.37 temperature 30.0 30 < th dose independent rect. 18 11
444 88.37 wind 9.0 30 < th dose dependent rect. 18 11
452 88.40 wind 1.0 90 > th dose independent rect. 17 11
455 88.42 precipitation 0.1 90 < th dose independent rect. 5 2
458 88.42 precipitation 0.1 90 < th dose dependent rect. 5 2
484 88.58 precipitation 0.1 720 < th dose independent rect. 4 3
485 88.58 precipitation 0.1 720 < th dose dependent rect. 4 3
513 88.70 atmosphere 1015.0 90 < th dose independent rect. 7 22
527 88.79 wind 1.0 10 > th dose independent rect. 5 2
532 88.81 atmosphere 995.0 720 > th dose independent rect. 19 21
534 88.82 wind 9.0 720 < th dose independent rect. 19 21
548 88.83 wind 9.0 90 < th dose dependent rect. 5 2
567 88.87 radiation 1.0 720 > th dose independent rect. 7 22
571 88.88 radiation 1.0 720 > th dose independent rect. 7 12
582 88.89 wind 9.0 90 < th dose independent rect. 7 22
586 88.93 humidity 50.0 30 > th dose independent rect. 7 22
589 88.94 precipitation 0.1 720 < th dose independent rect. 22 6
591 88.94 precipitation 0.1 720 < th dose dependent rect. 22 6
624 89.05 wind 1.0 90 > th dose independent rect. 7 21
690 89.29 wind 1.0 10 > th dose dependent rect. 4 3
693 89.30 radiation 40.0 720 < th dose dependent rect. 19 12
696 89.33 radiation 40.0 270 < th dose independent rect. 7 20
700 89.36 wind 9.0 720 < th dose dependent rect. 5 2
739 89.48 humidity 90.0 720 > th dose dependent rect. 18 6
755 89.53 temperature 30.0 720 < th dose independent rect. 18 6
823 89.72 radiation 40.0 720 < th dose dependent rect. 4 3
830 89.74 humidity 90.0 720 > th dose dependent rect. 15 9
876 89.82 precipitation 0.1 720 < th dose independent rect. 7 5
889 89.82 precipitation 0.1 720 < th dose dependent rect. 7 5
915 89.84 humidity 50.0 30 > th dose independent rect. 5 13
923 89.85 radiation 20.0 720 < th dose independent rect. 21 10
958 89.91 temperature 10.0 720 > th dose independent rect. 12 19