Os05g0449200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os05g0449200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 246.51 | 0.738 | 8.39 | -0.395 | 2.33 | 0.346 | 1.22 | -4.32 | 0.543 | 11.7 | 10 | 1449 | -- | -- |
| 276.75 | 0.775 | 8.36 | -0.394 | 2.32 | 0.229 | 1.47 | -- | 0.519 | 11.7 | 19.68 | 1010 | -- | -- |
| 249.1 | 0.735 | 8.35 | -0.164 | 2.36 | 0.376 | -- | -4.17 | 0.608 | 11.8 | 19.33 | 1864 | -- | -- |
| 280.83 | 0.78 | 8.38 | -0.395 | 2.17 | 0.503 | -- | -- | 0.504 | 11.9 | 19.78 | 1017 | -- | -- |
| 393.89 | 0.929 | 8.41 | -0.565 | -- | -1.5 | -- | -0.78 | 0.455 | -- | 14.35 | 1101 | -- | -- |
| 280.28 | 0.785 | 8.36 | -0.466 | 2.28 | -- | 1.25 | -- | 0.479 | 11.6 | -- | -- | -- | -- |
| 287.04 | 0.793 | 8.36 | -0.416 | 2.27 | -- | -- | -- | 0.483 | 11.6 | -- | -- | -- | -- |
| 299.47 | 0.81 | 8.43 | -0.469 | -- | -1.67 | -- | -- | 0.382 | -- | 2.187 | 1175 | -- | -- |
| 284.87 | 0.786 | 8.38 | -- | 2.17 | 0.503 | -- | -- | 0.504 | 12 | 19.68 | 999 | -- | -- |
| 611.49 | 1.16 | 8.41 | -0.479 | -- | -- | -- | -- | 0.458 | -- | -- | -- | -- | -- |
| 291.61 | 0.799 | 8.35 | -- | 2.28 | -- | -- | -- | 0.53 | 11.6 | -- | -- | -- | -- |
| 305.26 | 0.816 | 8.41 | -- | -- | -1.67 | -- | -- | 0.434 | -- | 2.187 | 1175 | -- | -- |
| 617.56 | 1.16 | 8.4 | -- | -- | -- | -- | -- | 0.511 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 239.32 | radiation | 10.0 | 720 | < th | dose independent | rect. | 4 | 19 |
| 3 | 240.22 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 7 | 240.76 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 22 | 243.15 | radiation | 10.0 | 720 | < th | dose independent | rect. | 1 | 16 |
| 29 | 243.27 | radiation | 10.0 | 720 | < th | dose independent | rect. | 10 | 13 |
| 54 | 244.50 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 21 | 8 |
| 56 | 244.68 | radiation | 10.0 | 720 | < th | dose independent | sin | 21 | NA |
| 58 | 244.70 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 68 | 244.86 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 88 | 245.11 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 103 | 245.54 | wind | 7.0 | 720 | < th | dose independent | rect. | 15 | 4 |
| 109 | 245.73 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 114 | 245.83 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 6 | 11 |
| 117 | 245.85 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 6 | 13 |
| 119 | 245.85 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 6 | 21 |
| 123 | 245.86 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 12 | 23 |
| 145 | 246.15 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 17 | 22 |
| 146 | 246.16 | radiation | 10.0 | 1440 | < th | dose independent | sin | 1 | NA |
| 151 | 246.23 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 193 | 246.43 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 22 | 19 |
| 234 | 246.54 | radiation | 10.0 | 1440 | < th | dose independent | no | NA | NA |
| 238 | 246.54 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 24 | 23 |
| 294 | 246.66 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 8 | 23 |
| 338 | 247.10 | wind | 9.0 | 720 | < th | dose independent | rect. | 23 | 20 |
| 341 | 247.16 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 440 | 247.91 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 20 | NA |
| 461 | 248.08 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 22 | 10 |
| 472 | 248.17 | wind | 9.0 | 720 | < th | dose independent | rect. | 22 | 23 |
| 502 | 248.32 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 20 | NA |
| 510 | 248.35 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 514 | 248.38 | temperature | 20.0 | 30 | > th | dose independent | rect. | 21 | 12 |
| 524 | 248.42 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 540 | 248.50 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 541 | 248.51 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 548 | 248.55 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 579 | 248.76 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 15 | 3 |
| 634 | 249.01 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 22 | 10 |
| 639 | 249.02 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 640 | 249.02 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 24 | 8 |
| 648 | 249.04 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 656 | 249.05 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 12 |
| 692 | 249.23 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 17 | 2 |
| 740 | 249.39 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 13 | 6 |
| 747 | 249.41 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 759 | 249.44 | atmosphere | 1000.0 | 14400 | > th | dose dependent | sin | 21 | NA |
| 809 | 249.62 | wind | 9.0 | 720 | < th | dose independent | rect. | 13 | 15 |
| 970 | 250.07 | wind | 9.0 | 720 | < th | dose independent | rect. | 7 | 21 |