Os05g0448300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0448300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.52 | 0.392 | 3.12 | -0.172 | 0.321 | -3.92 | -0.619 | 13.3 | -0.00383 | 6.56 | 0.8025 | 8 | -- | -- |
| 71.62 | 0.397 | 3.11 | -0.154 | 0.343 | 0.101 | -0.684 | -- | -0.015 | 6.34 | 0.8025 | 8 | -- | -- |
| 70.19 | 0.39 | 3.12 | -0.183 | 0.32 | -4.01 | -- | 14 | -0.00196 | 6.79 | 1.12 | 5 | -- | -- |
| 72.71 | 0.397 | 3.1 | -0.193 | 0.329 | -0.401 | -- | -- | -0.0222 | 6.63 | 0.1349 | 5 | -- | -- |
| 75.44 | 0.405 | 3.13 | -0.168 | -- | -4.14 | -- | 14.2 | 0.00811 | -- | 0.828 | 5 | -- | -- |
| 71.63 | 0.397 | 3.11 | -0.155 | 0.342 | -- | -0.689 | -- | -0.0148 | 6.34 | -- | -- | -- | -- |
| 72.75 | 0.399 | 3.11 | -0.163 | 0.339 | -- | -- | -- | -0.012 | 6.66 | -- | -- | -- | -- |
| 78.59 | 0.413 | 3.12 | -0.161 | -- | -0.362 | -- | -- | -0.00324 | -- | 0.08921 | 5 | -- | -- |
| 73.37 | 0.399 | 3.11 | -- | 0.336 | -0.242 | -- | -- | 0.00797 | 6.72 | 0.2589 | 5 | -- | -- |
| 78.76 | 0.415 | 3.12 | -0.155 | -- | -- | -- | -- | -0.00523 | -- | -- | -- | -- | -- |
| 73.44 | 0.401 | 3.11 | -- | 0.337 | -- | -- | -- | 0.00608 | 6.69 | -- | -- | -- | -- |
| 79.27 | 0.415 | 3.11 | -- | -- | -0.306 | -- | -- | 0.0142 | -- | 0.127 | 5 | -- | -- |
| 79.39 | 0.416 | 3.11 | -- | -- | -- | -- | -- | 0.0119 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.03 | humidity | 80.0 | 10 | < th | dose independent | rect. | 2 | 4 |
| 14 | 65.04 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 24 | 65.05 | humidity | 80.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 49 | 65.14 | wind | 1.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 51 | 65.18 | wind | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 60 | 65.53 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 1 |
| 64 | 65.53 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 131 | 66.40 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 141 | 66.40 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 151 | 66.43 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 5 | 1 |
| 153 | 66.50 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 3 |
| 154 | 66.51 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 168 | 66.88 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 7 |
| 174 | 66.89 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 7 |
| 183 | 67.04 | humidity | 80.0 | 270 | < th | dose independent | rect. | 2 | 1 |
| 194 | 67.09 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 5 |
| 196 | 67.10 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 5 |
| 271 | 67.58 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 276 | 67.77 | precipitation | 0.1 | 10 | > th | dose independent | sin | 2 | NA |
| 277 | 67.77 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 2 | NA |
| 282 | 67.82 | precipitation | 0.1 | 10 | < th | dose independent | sin | 3 | NA |
| 283 | 67.82 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 3 | NA |
| 312 | 67.96 | wind | 1.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 315 | 67.99 | temperature | 25.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 377 | 68.35 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 384 | 68.39 | wind | 5.0 | 10 | > th | dose independent | rect. | 4 | 4 |
| 400 | 68.43 | wind | 9.0 | 1440 | < th | dose independent | rect. | 24 | 4 |
| 406 | 68.46 | wind | 5.0 | 270 | > th | dose dependent | rect. | 4 | 3 |
| 424 | 68.51 | radiation | 30.0 | 90 | < th | dose independent | rect. | 2 | 9 |
| 512 | 68.61 | wind | 1.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 544 | 68.71 | radiation | 40.0 | 10 | < th | dose independent | rect. | 3 | 8 |
| 552 | 68.74 | precipitation | 0.1 | 90 | < th | dose independent | sin | 5 | NA |
| 556 | 68.74 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 5 | NA |
| 601 | 68.87 | precipitation | 0.1 | 90 | > th | dose independent | sin | 6 | NA |
| 602 | 68.87 | wind | 1.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 605 | 68.88 | wind | 1.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 606 | 68.88 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 607 | 68.88 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 611 | 68.88 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 614 | 68.88 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 616 | 68.88 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 12 | 23 |
| 619 | 68.88 | wind | 1.0 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 620 | 68.88 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 627 | 68.90 | temperature | 25.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 629 | 68.90 | precipitation | 0.1 | 90 | > th | dose dependent | sin | 6 | NA |
| 668 | 68.97 | radiation | 20.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 679 | 68.97 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 2 | 7 |
| 687 | 68.99 | radiation | 40.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 703 | 69.01 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 743 | 69.05 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 746 | 69.05 | wind | 1.0 | 30 | > th | dose independent | rect. | 23 | 14 |
| 758 | 69.06 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 769 | 69.08 | humidity | 70.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 783 | 69.10 | wind | 1.0 | 270 | > th | dose independent | rect. | 23 | 1 |
| 784 | 69.10 | humidity | 60.0 | 90 | > th | dose independent | rect. | 2 | 9 |
| 785 | 69.10 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 11 | 16 |
| 788 | 69.10 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 6 |
| 798 | 69.11 | humidity | 90.0 | 90 | > th | dose independent | rect. | 2 | 8 |
| 804 | 69.11 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 24 | 4 |
| 814 | 69.13 | temperature | 20.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 877 | 69.14 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 23 | 4 |
| 884 | 69.15 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 4 |
| 887 | 69.15 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 24 | 4 |
| 891 | 69.15 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 24 | 4 |
| 900 | 69.15 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 24 | 4 |
| 901 | 69.15 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 24 | 4 |
| 923 | 69.15 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 20 |
| 926 | 69.15 | wind | 1.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 971 | 69.18 | humidity | 60.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 972 | 69.18 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 7 | 1 |
| 983 | 69.18 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 7 | 1 |
| 995 | 69.19 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 10 | 1 |