Os05g0447700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ferritin/ribonucleotide reductase-like family protein.
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Os05g0447700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ferritin/ribonucleotide reductase-like family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 220.76 | 0.698 | 11.8 | -0.41 | 4.05 | -1.36 | -0.149 | 3.89 | -0.352 | 17.4 | 78.3 | 205 | 21.6 | -- |
| 249.23 | 0.735 | 11.8 | -0.327 | 4.26 | -1.2 | -2.29 | -- | -0.367 | 17.4 | 75.56 | 171 | 20.8 | -- |
| 220.73 | 0.692 | 11.8 | -0.406 | 4.05 | -1.35 | -- | 3.94 | -0.351 | 17.4 | 78.05 | 200 | 21.6 | -- |
| 261.31 | 0.753 | 11.8 | -0.365 | 4.24 | -1.3 | -- | -- | -0.376 | 17.4 | 75.25 | 145 | 20.4 | -- |
| 282.19 | 0.782 | 11.5 | -0.113 | -- | -4.94 | -- | 3.02 | 0.018 | -- | 68 | 312 | 2.51 | -- |
| 288.41 | 0.796 | 11.8 | -0.329 | 4.98 | -- | -2.77 | -- | -0.328 | 17.8 | -- | -- | -- | -- |
| 306.93 | 0.82 | 11.8 | -0.309 | 4.97 | -- | -- | -- | -0.338 | 17.7 | -- | -- | -- | -- |
| 278.55 | 0.777 | 11.7 | -0.411 | -- | -4.83 | -- | -- | -0.338 | -- | 74 | 333 | 2.57 | -- |
| 263.04 | 0.755 | 11.8 | -- | 4.18 | -1.27 | -- | -- | -0.311 | 17.4 | 74.06 | 84 | 20.4 | -- |
| 1587.35 | 1.86 | 11.7 | -0.465 | -- | -- | -- | -- | -0.456 | -- | -- | -- | -- | -- |
| 309.45 | 0.823 | 11.8 | -- | 4.97 | -- | -- | -- | -0.304 | 17.7 | -- | -- | -- | -- |
| 283.03 | 0.784 | 11.7 | -- | -- | -4.83 | -- | -- | -0.292 | -- | 73.83 | 333 | 2.58 | -- |
| 1593.05 | 1.86 | 11.7 | -- | -- | -- | -- | -- | -0.404 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 225.21 | humidity | 80 | 270 | > th | dose independent | rect. | 3 | 12 |
| 3 | 226.09 | humidity | 80 | 270 | > th | dose independent | sin | 4 | NA |
| 5 | 226.58 | humidity | 60 | 270 | > th | dose dependent | sin | 4 | NA |
| 18 | 227.80 | humidity | 50 | 270 | > th | dose dependent | rect. | 3 | 16 |
| 25 | 228.25 | humidity | 70 | 270 | > th | dose dependent | rect. | 3 | 14 |
| 30 | 228.44 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 32 | 228.46 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 6 |
| 100 | 231.16 | humidity | 50 | 10 | > th | dose dependent | sin | 1 | NA |
| 212 | 234.06 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 4 |
| 217 | 234.26 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 2 |
| 255 | 235.09 | radiation | 40 | 90 | < th | dose independent | rect. | 5 | 16 |
| 276 | 235.70 | humidity | 70 | 10 | > th | dose independent | rect. | 3 | 13 |
| 281 | 235.77 | temperature | 20 | 720 | < th | dose independent | rect. | 4 | 14 |
| 291 | 235.92 | radiation | 30 | 270 | < th | dose independent | rect. | 1 | 8 |
| 301 | 236.12 | humidity | 70 | 10 | > th | dose independent | rect. | 3 | 9 |
| 304 | 236.14 | humidity | 70 | 10 | > th | dose independent | rect. | 3 | 11 |
| 307 | 236.17 | temperature | 25 | 720 | < th | dose dependent | sin | 5 | NA |
| 348 | 237.01 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 9 |
| 356 | 237.10 | humidity | 70 | 10 | > th | dose independent | sin | 1 | NA |
| 365 | 237.28 | radiation | 40 | 90 | < th | dose independent | rect. | 3 | 18 |
| 384 | 237.59 | radiation | 40 | 90 | < th | dose independent | sin | 5 | NA |
| 402 | 237.78 | humidity | 50 | 10 | > th | dose dependent | rect. | 6 | 16 |
| 430 | 238.24 | radiation | 40 | 270 | < th | dose independent | rect. | 3 | 16 |
| 431 | 238.25 | radiation | 40 | 90 | < th | dose independent | rect. | 3 | 8 |
| 523 | 239.71 | radiation | 40 | 270 | < th | dose dependent | rect. | 1 | 9 |
| 542 | 239.97 | humidity | 70 | 10 | > th | dose independent | rect. | 3 | 20 |
| 589 | 240.64 | temperature | 20 | 720 | < th | dose independent | sin | 2 | NA |
| 651 | 241.26 | radiation | 40 | 270 | < th | dose dependent | sin | 5 | NA |
| 676 | 241.49 | radiation | 40 | 90 | < th | dose independent | rect. | 3 | 12 |
| 681 | 241.51 | radiation | 40 | 90 | < th | dose dependent | sin | 1 | NA |
| 697 | 241.70 | radiation | 40 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 707 | 241.79 | humidity | 50 | 10 | > th | dose dependent | rect. | 3 | 20 |
| 759 | 242.32 | humidity | 70 | 10 | > th | dose independent | rect. | 5 | 11 |
| 765 | 242.39 | radiation | 40 | 90 | < th | dose independent | rect. | 3 | 10 |
| 781 | 242.51 | humidity | 90 | 10 | < th | dose dependent | rect. | 9 | 7 |
| 787 | 242.56 | humidity | 90 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 801 | 242.68 | radiation | 40 | 10 | < th | dose independent | rect. | 6 | 17 |
| 806 | 242.71 | humidity | 90 | 10 | < th | dose dependent | sin | 1 | NA |
| 842 | 243.00 | humidity | 80 | 270 | < th | dose independent | rect. | 6 | 7 |
| 855 | 243.13 | radiation | 40 | 10 | < th | dose independent | rect. | 3 | 20 |
| 857 | 243.15 | temperature | 25 | 270 | < th | dose independent | rect. | 8 | 3 |
| 871 | 243.25 | radiation | 40 | 270 | < th | dose independent | sin | 7 | NA |
| 876 | 243.30 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 6 |
| 877 | 243.30 | humidity | 80 | 10 | < th | dose independent | rect. | 9 | 7 |
| 922 | 243.55 | humidity | 70 | 10 | > th | dose independent | rect. | 5 | 17 |
| 949 | 243.69 | humidity | 50 | 10 | > th | dose dependent | rect. | 3 | 9 |
| 958 | 243.78 | humidity | 90 | 270 | < th | dose dependent | rect. | 21 | 16 |
| 970 | 243.86 | humidity | 90 | 270 | < th | dose dependent | sin | 5 | NA |