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Os05g0445900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to ROS1 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.56 (0.0242) R2 : 0.773
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.49 (0.0633) R2dC : 0.775 R2C : 0.768
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.145 (0.0508) R2dN8 : 0.0052 R2N8 : -0.00177
σ : 0.455
deviance : 94.81
__
_____
C
peak time of C : 17.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
84.7 0.432 8.56 0.327 2.18 -0.698 -0.156 0.457 0.163 18.8 8.38 264 -- --
85.62 0.431 8.56 0.316 2.17 -0.689 -0.183 -- 0.16 18.8 8.335 268 -- --
84.73 0.429 8.56 0.329 2.17 -0.704 -- 0.461 0.162 18.8 8.24 266 -- --
85.69 0.431 8.56 0.321 2.16 -0.706 -- -- 0.159 18.8 8.24 270 -- --
122.91 0.516 8.58 -0.191 -- -2.66 -- 2.96 0.0227 -- 1.561 692 -- --
92.25 0.45 8.55 0.292 2.5 -- -0.336 -- 0.179 17.8 -- -- -- --
92.53 0.45 8.55 0.294 2.5 -- -- -- 0.177 17.8 -- -- -- --
106.35 0.48 8.53 0.143 -- -3.03 -- -- 0.0465 -- 1.71 727 -- --
88.4 0.438 8.56 -- 2.16 -0.702 -- -- 0.133 18.8 8.239 270 -- --
416.29 0.953 8.51 0.217 -- -- -- -- 0.119 -- -- -- -- --
94.81 0.455 8.56 -- 2.49 -- -- -- 0.145 17.8 -- -- -- --
106.56 0.481 8.53 -- -- -3.04 -- -- 0.0326 -- 1.568 729 -- --
417.53 0.954 8.52 -- -- -- -- -- 0.0946 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 73.78 temperature 15.0 270 > th dose independent rect. 3 18
2 74.02 temperature 15.0 270 > th dose independent rect. 17 14
5 75.09 temperature 10.0 270 > th dose dependent rect. 3 5
7 75.31 temperature 15.0 270 > th dose independent rect. 13 9
9 75.40 radiation 20.0 270 < th dose independent rect. 17 14
11 75.52 humidity 50.0 270 > th dose independent rect. 17 14
13 75.55 wind 9.0 270 < th dose independent rect. 7 10
16 75.72 temperature 10.0 270 > th dose independent rect. 7 10
17 75.72 atmosphere 1015.0 270 < th dose independent rect. 7 10
20 75.77 radiation 30.0 270 < th dose dependent rect. 16 15
21 75.79 radiation 30.0 270 < th dose dependent rect. 15 17
23 75.80 temperature 15.0 270 > th dose independent rect. 1 22
24 75.85 wind 5.0 270 < th dose independent rect. 21 6
26 75.92 precipitation 0.1 270 < th dose independent rect. 7 10
27 75.92 precipitation 0.1 270 < th dose dependent rect. 7 10
29 75.97 temperature 15.0 90 > th dose independent rect. 5 18
33 76.03 atmosphere 995.0 270 > th dose independent rect. 17 14
37 76.09 radiation 10.0 30 < th dose dependent rect. 23 7
41 76.18 radiation 30.0 270 < th dose dependent rect. 3 6
42 76.21 radiation 10.0 10 < th dose independent rect. 6 17
45 76.29 temperature 15.0 90 > th dose independent rect. 19 14
47 76.32 wind 9.0 270 < th dose independent rect. 17 14
49 76.38 precipitation 0.1 270 < th dose independent rect. 17 14
50 76.38 precipitation 0.1 270 < th dose dependent rect. 17 14
56 76.57 atmosphere 1015.0 270 < th dose independent rect. 3 18
60 76.65 radiation 1.0 90 < th dose independent rect. 22 8
62 76.67 radiation 10.0 270 < th dose dependent rect. 3 18
66 76.71 radiation 20.0 270 < th dose independent rect. 3 5
67 76.72 wind 7.0 270 < th dose independent rect. 8 19
68 76.74 temperature 10.0 270 > th dose independent rect. 21 6
69 76.74 temperature 30.0 270 < th dose independent rect. 21 6
70 76.74 humidity 50.0 270 > th dose independent rect. 21 6
73 76.74 atmosphere 995.0 270 > th dose independent rect. 21 6
74 76.74 radiation 1.0 270 < th dose independent rect. 21 6
81 76.74 radiation 1.0 270 < th dose dependent rect. 21 6
90 76.80 precipitation 0.1 270 < th dose independent rect. 21 6
91 76.80 precipitation 0.1 270 < th dose dependent rect. 21 6
93 76.81 temperature 15.0 10 > th dose dependent rect. 4 5
96 76.87 atmosphere 995.0 270 > th dose independent rect. 7 10
102 76.92 precipitation 0.1 270 < th dose independent rect. 3 18
104 76.92 precipitation 0.1 270 < th dose dependent rect. 3 18
105 76.93 temperature 15.0 4320 > th dose independent rect. 7 2
114 77.05 humidity 70.0 270 > th dose independent rect. 3 5
125 77.18 temperature 20.0 270 > th dose independent rect. 3 5
126 77.20 atmosphere 1010.0 270 < th dose independent rect. 13 9
129 77.21 humidity 50.0 270 > th dose dependent rect. 3 6
131 77.25 atmosphere 995.0 270 > th dose dependent rect. 22 4
135 77.28 wind 7.0 10 < th dose independent rect. 23 7
137 77.29 radiation 10.0 270 < th dose independent rect. 4 3
139 77.29 wind 9.0 270 < th dose dependent rect. 21 6
141 77.30 temperature 10.0 10 > th dose independent rect. 23 7
142 77.30 temperature 30.0 10 < th dose independent rect. 23 7
143 77.30 humidity 50.0 10 > th dose independent rect. 23 7
146 77.30 atmosphere 995.0 10 > th dose independent rect. 23 7
147 77.30 radiation 20.0 10 < th dose independent rect. 23 7
150 77.30 temperature 10.0 10 > th dose independent rect. 6 17
152 77.30 atmosphere 1015.0 10 < th dose independent rect. 6 17
153 77.31 radiation 10.0 270 < th dose independent rect. 3 18
155 77.33 precipitation 0.1 270 < th dose independent rect. 3 5
158 77.33 precipitation 0.1 270 < th dose dependent rect. 3 5
162 77.37 precipitation 0.1 10 < th dose independent rect. 6 17
164 77.37 precipitation 0.1 10 < th dose dependent rect. 6 17
166 77.40 radiation 20.0 10 < th dose dependent rect. 6 17
174 77.46 wind 7.0 270 < th dose independent rect. 3 5
179 77.49 temperature 10.0 270 > th dose independent rect. 3 5
181 77.49 temperature 30.0 270 < th dose independent rect. 3 5
182 77.49 humidity 50.0 270 > th dose independent rect. 3 5
184 77.49 atmosphere 995.0 270 > th dose independent rect. 3 5
185 77.49 atmosphere 1015.0 270 < th dose independent rect. 3 5
188 77.49 temperature 10.0 270 > th dose independent rect. 8 19
196 77.51 temperature 10.0 10 > th dose dependent rect. 6 3
198 77.52 radiation 1.0 90 < th dose dependent rect. 22 13
199 77.52 temperature 10.0 90 > th dose dependent rect. 19 14
213 77.53 wind 9.0 270 < th dose independent rect. 3 18
219 77.55 wind 1.0 270 > th dose independent rect. 3 4
240 77.64 temperature 25.0 10 > th dose independent rect. 5 4
242 77.65 wind 5.0 270 < th dose independent rect. 22 4
256 77.67 wind 1.0 270 > th dose independent rect. 7 10
260 77.68 precipitation 0.1 270 < th dose independent rect. 8 19
262 77.68 precipitation 0.1 270 < th dose dependent rect. 8 19
263 77.69 wind 1.0 10 > th dose independent rect. 4 5
264 77.69 temperature 10.0 1440 > th dose independent rect. 24 7
267 77.69 temperature 30.0 1440 < th dose independent rect. 24 7
271 77.69 humidity 50.0 1440 > th dose independent rect. 24 7
276 77.69 atmosphere 995.0 1440 > th dose independent rect. 24 7
277 77.69 radiation 40.0 1440 < th dose independent rect. 24 7
282 77.69 temperature 10.0 1440 > th dose independent rect. 7 17
285 77.69 atmosphere 995.0 30 > th dose dependent rect. 9 21
292 77.72 humidity 50.0 10 > th dose dependent rect. 23 7
293 77.73 radiation 40.0 10 < th dose dependent rect. 6 3
294 77.74 wind 9.0 10 < th dose dependent rect. 6 3
296 77.75 wind 9.0 30 < th dose independent rect. 6 17
302 77.78 temperature 10.0 270 > th dose independent rect. 22 15
303 77.78 atmosphere 995.0 270 > th dose independent rect. 22 15
310 77.81 atmosphere 995.0 10 > th dose dependent rect. 23 7
312 77.82 radiation 40.0 10 < th dose independent rect. 6 3
320 77.85 humidity 50.0 270 > th dose dependent rect. 21 6
331 77.92 wind 9.0 270 < th dose independent rect. 22 15
343 77.97 radiation 40.0 270 < th dose independent rect. 13 9
350 77.99 radiation 1.0 90 < th dose dependent rect. 22 17
361 78.04 wind 7.0 10 < th dose independent rect. 6 3
363 78.04 temperature 10.0 10 > th dose independent rect. 6 3
365 78.04 temperature 30.0 10 < th dose independent rect. 6 3
366 78.04 humidity 50.0 10 > th dose independent rect. 6 3
368 78.04 atmosphere 995.0 10 > th dose independent rect. 6 3
369 78.04 atmosphere 1015.0 10 < th dose independent rect. 6 3
370 78.04 radiation 1.0 90 > th dose independent rect. 4 5
393 78.04 temperature 10.0 10 > th dose independent rect. 9 21
406 78.08 precipitation 0.1 10 < th dose independent rect. 6 3
407 78.08 radiation 1.0 90 < th dose independent rect. 22 13
408 78.08 precipitation 0.1 10 < th dose dependent rect. 6 3
415 78.10 wind 9.0 10 < th dose independent rect. 9 21
424 78.13 wind 1.0 10 > th dose independent rect. 4 19
454 78.18 precipitation 0.1 30 < th dose independent rect. 23 7
455 78.18 precipitation 0.1 30 < th dose dependent rect. 23 7
469 78.23 atmosphere 995.0 1440 > th dose independent rect. 7 3
470 78.23 atmosphere 1015.0 1440 < th dose independent rect. 7 3
473 78.23 temperature 10.0 1440 > th dose independent rect. 10 21
490 78.25 precipitation 0.1 270 < th dose independent rect. 22 15
492 78.25 precipitation 0.1 270 < th dose dependent rect. 22 15
500 78.28 temperature 30.0 270 < th dose independent rect. 17 14
516 78.35 wind 1.0 30 > th dose independent rect. 6 3
536 78.37 atmosphere 995.0 10 > th dose independent rect. 9 21
538 78.38 atmosphere 995.0 270 > th dose dependent rect. 8 19
540 78.39 atmosphere 995.0 270 > th dose independent rect. 3 18
573 78.45 precipitation 0.1 270 < th dose independent rect. 13 9
575 78.45 humidity 50.0 30 > th dose dependent rect. 6 3
577 78.45 precipitation 0.1 270 < th dose dependent rect. 13 9
582 78.46 temperature 30.0 90 < th dose independent rect. 17 16
602 78.52 humidity 50.0 270 > th dose independent rect. 22 15
608 78.55 radiation 1.0 90 < th dose independent rect. 22 17
617 78.59 atmosphere 995.0 270 > th dose independent rect. 8 19
620 78.59 atmosphere 995.0 10 > th dose dependent rect. 9 19
626 78.60 atmosphere 995.0 10 > th dose dependent rect. 23 5
627 78.60 wind 9.0 10 < th dose dependent rect. 23 7
632 78.62 humidity 90.0 30 < th dose independent rect. 4 5
671 78.67 precipitation 0.1 30 < th dose independent rect. 9 21
674 78.67 precipitation 0.1 30 < th dose dependent rect. 9 21
683 78.70 radiation 1.0 10 > th dose independent rect. 6 3
686 78.70 radiation 40.0 90 < th dose independent rect. 19 14
694 78.71 wind 5.0 10 < th dose independent rect. 23 5
711 78.72 humidity 50.0 270 > th dose independent rect. 3 17
712 78.72 wind 9.0 270 < th dose dependent rect. 22 4
724 78.75 wind 1.0 270 > th dose independent rect. 21 6
743 78.80 atmosphere 995.0 10 > th dose dependent rect. 6 3
779 78.87 humidity 50.0 10 > th dose dependent rect. 23 5
787 78.89 wind 9.0 270 < th dose independent rect. 13 9
790 78.89 atmosphere 995.0 270 > th dose dependent rect. 23 2
796 78.90 atmosphere 995.0 10 > th dose independent rect. 6 17
807 78.91 wind 9.0 10 < th dose dependent rect. 23 5
816 78.95 wind 1.0 270 > th dose independent rect. 13 9
817 78.95 wind 1.0 10 > th dose independent rect. 6 17
818 78.95 wind 1.0 270 > th dose independent rect. 8 19
825 78.96 humidity 50.0 270 > th dose dependent rect. 22 4
837 78.99 radiation 1.0 270 > th dose independent rect. 7 10
857 79.03 humidity 60.0 90 > th dose independent rect. 19 14
862 79.05 wind 9.0 270 < th dose dependent rect. 3 4
868 79.08 temperature 30.0 90 < th dose independent rect. 19 14
909 79.17 precipitation 0.1 10 < th dose independent rect. 4 19
914 79.17 precipitation 0.1 10 < th dose dependent rect. 4 19
915 79.18 humidity 90.0 30 < th dose independent rect. 6 3
920 79.18 atmosphere 995.0 90 > th dose independent rect. 19 14
928 79.20 temperature 10.0 10 > th dose independent rect. 23 5
929 79.20 temperature 30.0 10 < th dose independent rect. 23 5
930 79.20 humidity 50.0 10 > th dose independent rect. 23 5
933 79.20 atmosphere 995.0 10 > th dose independent rect. 23 5
934 79.20 radiation 1.0 10 < th dose independent rect. 23 5
942 79.20 temperature 10.0 10 > th dose independent rect. 4 19
944 79.20 atmosphere 1015.0 10 < th dose independent rect. 4 19
946 79.20 radiation 1.0 10 < th dose dependent rect. 23 5
964 79.23 wind 9.0 1440 < th dose independent rect. 24 7
974 79.25 wind 9.0 90 < th dose independent rect. 19 14
981 79.27 humidity 50.0 270 > th dose independent rect. 13 9
982 79.27 precipitation 0.1 90 < th dose independent rect. 19 14
985 79.27 precipitation 0.1 90 < th dose dependent rect. 19 14
986 79.28 humidity 50.0 4320 > th dose independent rect. 7 3