Os05g0442700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : No apical meristem (NAM) protein domain containing protein.
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Os05g0442700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : No apical meristem (NAM) protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 336.71 | 0.862 | 4.52 | -0.884 | 1.21 | -2.19 | -1.12 | -0.248 | -0.653 | 1.94 | 24.8 | 698 | -- | -- |
| 336.79 | 0.855 | 4.52 | -0.922 | 1.21 | -2.17 | -1.09 | -- | -0.657 | 1.95 | 24.8 | 697 | -- | -- |
| 341.14 | 0.86 | 4.52 | -0.926 | 1.21 | -2.19 | -- | 0.154 | -0.668 | 2.13 | 24.9 | 698 | -- | -- |
| 341.16 | 0.86 | 4.52 | -0.903 | 1.2 | -2.2 | -- | -- | -0.667 | 2.13 | 24.9 | 704 | -- | -- |
| 415.15 | 0.949 | 4.54 | -1.01 | -- | -2.69 | -- | -0.0141 | -0.777 | -- | 25.7 | 926 | -- | -- |
| 406.25 | 0.945 | 4.43 | -0.333 | 1.37 | -- | -1.27 | -- | -0.218 | 1.25 | -- | -- | -- | -- |
| 412.82 | 0.951 | 4.42 | -0.289 | 1.37 | -- | -- | -- | -0.211 | 1.36 | -- | -- | -- | -- |
| 415.13 | 0.949 | 4.54 | -1.02 | -- | -2.67 | -- | -- | -0.769 | -- | 25.7 | 933 | -- | -- |
| 359.94 | 0.884 | 4.48 | -- | 1.25 | -1.82 | -- | -- | -0.495 | 1.98 | 24.83 | 644 | -- | -- |
| 528.71 | 1.07 | 4.4 | -0.235 | -- | -- | -- | -- | -0.183 | -- | -- | -- | -- | -- |
| 415.02 | 0.953 | 4.42 | -- | 1.37 | -- | -- | -- | -0.179 | 1.35 | -- | -- | -- | -- |
| 438.93 | 0.976 | 4.49 | -- | -- | -2.23 | -- | -- | -0.574 | -- | 25.7 | 898 | -- | -- |
| 530.17 | 1.07 | 4.4 | -- | -- | -- | -- | -- | -0.156 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 332.53 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 20 |
| 29 | 335.02 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 21 |
| 39 | 335.33 | temperature | 25 | 720 | < th | dose dependent | sin | 14 | NA |
| 58 | 336.22 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 10 |
| 76 | 336.82 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 85 | 337.17 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 96 | 337.33 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 10 |
| 104 | 337.54 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 23 |
| 106 | 337.62 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 15 |
| 127 | 338.24 | temperature | 20 | 270 | > th | dose independent | rect. | 12 | 23 |
| 147 | 338.76 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 17 |
| 162 | 339.08 | temperature | 20 | 270 | > th | dose independent | rect. | 10 | 23 |
| 173 | 339.45 | temperature | 20 | 720 | > th | dose independent | sin | 17 | NA |
| 181 | 339.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 5 |
| 194 | 340.33 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 7 |
| 204 | 340.50 | temperature | 20 | 270 | > th | dose independent | sin | 13 | NA |
| 261 | 341.21 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 262 | 341.22 | temperature | 20 | 720 | < th | dose independent | rect. | 10 | 19 |
| 267 | 341.27 | temperature | 20 | 720 | > th | dose independent | sin | 15 | NA |
| 268 | 341.27 | temperature | 20 | 270 | < th | dose independent | rect. | 10 | 22 |
| 276 | 341.33 | temperature | 20 | 4320 | > th | dose independent | sin | 18 | NA |
| 299 | 341.48 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 331 | 341.69 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 17 |
| 335 | 341.72 | temperature | 20 | 90 | < th | dose independent | rect. | 16 | 19 |
| 360 | 341.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 414 | 342.19 | temperature | 20 | 4320 | < th | dose independent | sin | 18 | NA |
| 417 | 342.21 | temperature | 20 | 270 | < th | dose independent | rect. | 16 | 16 |
| 464 | 342.47 | temperature | 20 | 720 | > th | dose independent | rect. | 15 | 20 |
| 521 | 342.76 | temperature | 20 | 720 | < th | dose independent | sin | 15 | NA |
| 566 | 343.01 | temperature | 20 | 90 | < th | dose independent | rect. | 16 | 22 |
| 567 | 343.01 | temperature | 15 | 720 | > th | dose dependent | sin | 11 | NA |
| 578 | 343.09 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 2 |
| 590 | 343.15 | temperature | 20 | 270 | < th | dose independent | sin | 12 | NA |
| 682 | 343.65 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 748 | 343.99 | temperature | 20 | 720 | < th | dose independent | rect. | 4 | 20 |
| 749 | 344.00 | temperature | 20 | 270 | < th | dose independent | no | NA | NA |
| 771 | 344.15 | temperature | 20 | 270 | < th | dose independent | rect. | 4 | 23 |
| 829 | 344.45 | temperature | 20 | 270 | > th | dose independent | no | NA | NA |
| 867 | 344.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 871 | 344.74 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 932 | 345.10 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 21 |
| 982 | 345.36 | temperature | 25 | 1440 | < th | dose dependent | sin | 3 | NA |
| 986 | 345.40 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 1 |