Os05g0442000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0442000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 421.74 | 0.965 | 2.93 | -0.0311 | 0.0469 | 0.341 | 0.431 | 2.53 | -0.0348 | 11.6 | 0.4139 | 4107 | -- | -- |
| 421.25 | 0.956 | 2.98 | -0.16 | 0.0339 | 0.933 | 0.56 | -- | -0.0226 | 12.4 | 0.8108 | 3852 | -- | -- |
| 422.52 | 0.957 | 2.92 | -0.0089 | 0.0566 | 0.32 | -- | 2.63 | -0.0354 | 12.7 | 0.3993 | 4102 | -- | -- |
| 421.93 | 0.957 | 2.98 | -0.15 | 0.0608 | 1 | -- | -- | -0.0265 | 12.7 | 0.8575 | 3852 | -- | -- |
| 422.07 | 0.957 | 2.91 | 0.0558 | -- | 0.247 | -- | 3.12 | -0.031 | -- | 0.8933 | 4088 | -- | -- |
| 441.45 | 0.985 | 2.99 | 0.145 | 0.0271 | -- | 0.406 | -- | -0.0958 | 9.86 | -- | -- | -- | -- |
| 442.04 | 0.985 | 2.99 | 0.161 | 0.0361 | -- | -- | -- | -0.0943 | 13.2 | -- | -- | -- | -- |
| 422.17 | 0.957 | 2.98 | -0.151 | -- | 0.996 | -- | -- | -0.028 | -- | 0.8524 | 3860 | -- | -- |
| 422.45 | 0.957 | 2.97 | -- | 0.0594 | 0.956 | -- | -- | -0.0157 | 12.9 | 0.8639 | 3852 | -- | -- |
| 442.12 | 0.983 | 2.99 | 0.16 | -- | -- | -- | -- | -0.095 | -- | -- | -- | -- | -- |
| 442.73 | 0.984 | 3 | -- | 0.0333 | -- | -- | -- | -0.112 | 13.1 | -- | -- | -- | -- |
| 422.7 | 0.958 | 2.97 | -- | -- | 0.95 | -- | -- | -0.0174 | -- | 0.8625 | 3891 | -- | -- |
| 442.8 | 0.982 | 3 | -- | -- | -- | -- | -- | -0.113 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 409.36 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 23 | 1 |
| 2 | 409.36 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 23 | 1 |
| 3 | 409.59 | temperature | 25.0 | 90 | < th | dose independent | rect. | 7 | 3 |
| 4 | 409.85 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 7 | 3 |
| 8 | 412.07 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 15 | 413.20 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 8 | 2 |
| 19 | 413.76 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 21 | 4 |
| 20 | 413.76 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 21 | 4 |
| 22 | 414.50 | temperature | 15.0 | 10 | > th | dose independent | rect. | 19 | 15 |
| 28 | 414.88 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 20 | 7 |
| 29 | 414.88 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 20 | 7 |
| 36 | 415.47 | wind | 1.0 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 37 | 415.64 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 66 | 416.28 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 70 | 416.38 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 23 | 4 |
| 72 | 416.38 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 23 | 4 |
| 73 | 416.92 | wind | 1.0 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 81 | 417.07 | wind | 1.0 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 85 | 417.25 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 2 |
| 92 | 417.33 | wind | 1.0 | 1440 | < th | dose independent | rect. | 10 | 5 |
| 99 | 417.43 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 120 | 417.60 | temperature | 30.0 | 10 | < th | dose independent | rect. | 19 | 16 |
| 135 | 418.15 | wind | 1.0 | 10 | > th | dose independent | rect. | 11 | 8 |
| 147 | 418.43 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 5 |
| 153 | 418.56 | humidity | 60.0 | 10 | > th | dose independent | rect. | 19 | 16 |
| 183 | 419.43 | temperature | 15.0 | 90 | > th | dose independent | rect. | 13 | 22 |
| 187 | 419.53 | temperature | 25.0 | 10 | < th | dose independent | rect. | 6 | 5 |
| 195 | 419.71 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 9 |
| 207 | 419.95 | wind | 7.0 | 10 | < th | dose independent | rect. | 19 | 16 |
| 219 | 420.14 | temperature | 10.0 | 10 | > th | dose independent | rect. | 11 | 8 |
| 221 | 420.14 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 11 | 8 |
| 224 | 420.14 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 19 | 16 |
| 225 | 420.16 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 11 | 8 |
| 226 | 420.16 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 11 | 8 |
| 248 | 420.47 | wind | 9.0 | 10 | < th | dose independent | rect. | 11 | 8 |
| 301 | 420.78 | radiation | 40.0 | 90 | > th | dose dependent | rect. | 15 | 18 |
| 306 | 420.80 | temperature | 30.0 | 10 | < th | dose independent | rect. | 7 | 13 |
| 309 | 420.87 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 12 |
| 314 | 420.94 | wind | 1.0 | 720 | < th | dose dependent | rect. | 22 | 1 |
| 315 | 420.95 | radiation | 10.0 | 30 | > th | dose independent | rect. | 7 | 3 |
| 318 | 420.98 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 12 | 7 |
| 322 | 420.98 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 19 | 17 |
| 325 | 420.98 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 19 | 17 |
| 326 | 421.00 | temperature | 25.0 | 720 | < th | dose independent | rect. | 22 | 1 |
| 336 | 421.06 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 21 | 21 |
| 349 | 421.09 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 11 |
| 365 | 421.12 | wind | 1.0 | 270 | > th | dose independent | rect. | 5 | 3 |
| 381 | 421.19 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 15 |
| 382 | 421.19 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 23 |
| 389 | 421.30 | wind | 3.0 | 90 | > th | dose independent | rect. | 21 | 16 |
| 399 | 421.39 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 18 | 16 |
| 401 | 421.39 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 18 | 16 |
| 405 | 421.40 | wind | 3.0 | 10 | > th | dose independent | rect. | 19 | 18 |
| 406 | 421.43 | temperature | 15.0 | 90 | > th | dose independent | rect. | 23 | 11 |
| 419 | 421.50 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 18 | NA |
| 429 | 421.59 | humidity | 60.0 | 10 | > th | dose independent | rect. | 7 | 4 |
| 430 | 421.59 | radiation | 40.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 468 | 421.63 | temperature | 15.0 | 10 | > th | dose independent | rect. | 14 | 21 |
| 496 | 421.71 | wind | 1.0 | 30 | > th | dose independent | rect. | 7 | 4 |
| 497 | 421.71 | temperature | 20.0 | 30 | > th | dose independent | rect. | 7 | 4 |
| 504 | 421.74 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 19 | 1 |
| 514 | 421.74 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 560 | 421.86 | radiation | 1.0 | 90 | > th | dose independent | rect. | 10 | 20 |
| 577 | 421.95 | wind | 5.0 | 10 | < th | dose independent | rect. | 7 | 4 |
| 582 | 421.97 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 2 |
| 586 | 421.99 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 6 | 1 |
| 590 | 422.03 | wind | 1.0 | 1440 | < th | dose independent | rect. | 10 | 11 |
| 592 | 422.04 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 6 |
| 610 | 422.11 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 11 | 20 |
| 612 | 422.11 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 11 | 20 |
| 615 | 422.13 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 24 | 3 |
| 616 | 422.13 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 24 | 3 |
| 643 | 422.23 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 668 | 422.32 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 670 | 422.32 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 17 | 4 |
| 676 | 422.33 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 22 |
| 678 | 422.35 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 18 | 1 |
| 679 | 422.35 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 23 |
| 715 | 422.50 | temperature | 30.0 | 10 | < th | dose independent | rect. | 14 | 21 |
| 720 | 422.53 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 12 |
| 732 | 422.59 | temperature | 15.0 | 270 | > th | dose independent | rect. | 15 | 17 |
| 739 | 422.61 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 8 |
| 766 | 422.70 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 11 | 8 |
| 771 | 422.74 | radiation | 10.0 | 90 | < th | dose independent | rect. | 20 | 11 |
| 773 | 422.75 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 7 | 4 |
| 774 | 422.75 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 7 | 4 |
| 789 | 422.80 | wind | 7.0 | 30 | > th | dose dependent | rect. | 19 | 1 |
| 812 | 422.89 | wind | 5.0 | 10 | < th | dose independent | rect. | 11 | 20 |
| 814 | 422.90 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 4 |
| 817 | 422.90 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 8 | 4 |
| 820 | 422.90 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 12 | 20 |
| 828 | 422.92 | temperature | 10.0 | 30 | > th | dose independent | rect. | 7 | 4 |
| 831 | 422.92 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 7 | 4 |
| 832 | 422.92 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 7 | 4 |
| 834 | 422.92 | temperature | 10.0 | 30 | > th | dose independent | rect. | 11 | 20 |
| 890 | 423.05 | wind | 3.0 | 10 | > th | dose independent | rect. | 7 | 6 |
| 898 | 423.08 | wind | 9.0 | 30 | < th | dose independent | rect. | 11 | 20 |
| 944 | 423.17 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 966 | 423.22 | wind | 1.0 | 90 | > th | dose dependent | rect. | 21 | 16 |
| 983 | 423.25 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 8 | 5 |
| 987 | 423.26 | precipitation | 0.1 | 4320 | > th | dose dependent | no | NA | NA |
| 995 | 423.30 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 1 | 7 |