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Os05g0441500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.8 (0.0225) R2 : 0.766
β1 : -2.1 (0.0824) R2dD : 0.349 R2D : 0.374
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.91 (0.0696) R2dE : 0.389 R2E : 0.421
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0406 (0.0481) R2dN8 : 0.000433 R2N8 : -0.00242
σ : 0.42
deviance : 81.37
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_____
C
peak time of C : --
E
wheather : wind
threshold : 8.589
memory length : 184
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 2.6
open length of G : 3.97

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
69.41 0.391 11.8 -2.2 0.454 -1.53 -0.649 -1.85 -0.054 15.6 9.105 264 2.12 3.99
69.83 0.389 11.8 -2.09 0.74 -1.67 0.147 -- -0.075 16.8 3.401 158 3.18 3.77
69.59 0.389 11.8 -2.18 0.571 -1.52 -- -1.46 -0.0589 16.4 6.148 209 2.67 3.98
69.37 0.388 11.8 -2.09 0.691 -1.68 -- -- -0.0662 16.6 3.538 150 3.32 3.65
79.12 0.414 11.8 -2.19 -- -1.69 -- -1.3 -0.0304 -- 12.66 170 2.68 4.22
109.33 0.49 11.8 -2.18 1.41 -- 0.887 -- -0.108 17.4 -- -- -- --
111.21 0.494 11.8 -2.18 1.41 -- -- -- -0.104 17.3 -- -- -- --
81.37 0.42 11.8 -2.1 -- -1.91 -- -- -0.0406 -- 8.589 184 2.6 3.97
183.77 0.631 11.8 -- 0.707 -1.9 -- -- 0.112 16.6 2.926 135 3.48 3.5
215.52 0.686 11.8 -2.23 -- -- -- -- -0.139 -- -- -- -- --
236.16 0.719 11.8 -- 1.45 -- -- -- 0.139 17.3 -- -- -- --
196.73 0.653 11.7 -- -- -2.04 -- -- 0.195 -- 6.035 178 2.58 4.05
346.21 0.868 11.8 -- -- -- -- -- 0.108 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 69.48 wind 9.0 270 < th dose dependent rect. 2 4
3 69.75 precipitation 0.1 270 < th dose independent rect. 2 4
4 69.75 precipitation 0.1 270 < th dose dependent rect. 2 4
5 69.89 humidity 50.0 270 > th dose dependent rect. 2 4
7 70.10 temperature 10.0 270 > th dose dependent rect. 2 4
9 70.73 radiation 10.0 270 < th dose independent rect. 2 4
10 70.75 wind 7.0 270 < th dose independent rect. 2 4
11 70.79 wind 5.0 90 < th dose dependent rect. 4 3
13 70.83 temperature 10.0 270 > th dose independent rect. 2 4
15 70.83 temperature 30.0 270 < th dose independent rect. 2 4
16 70.83 humidity 50.0 270 > th dose independent rect. 2 4
19 70.83 atmosphere 995.0 270 > th dose independent rect. 2 4
20 70.83 atmosphere 1010.0 270 < th dose independent rect. 2 4
25 70.83 temperature 10.0 270 > th dose independent rect. 6 20
27 70.88 wind 9.0 270 < th dose independent rect. 6 20
31 71.18 radiation 40.0 270 < th dose dependent rect. 2 4
41 71.99 wind 5.0 90 < th dose dependent rect. 3 6
45 72.29 precipitation 0.1 270 < th dose independent rect. 6 20
46 72.29 precipitation 0.1 270 < th dose dependent rect. 6 20
52 72.52 wind 3.0 90 < th dose independent rect. 4 3
53 72.59 humidity 50.0 270 > th dose dependent rect. 1 6
57 72.61 temperature 10.0 270 > th dose dependent rect. 21 4
59 72.63 precipitation 0.1 270 < th dose independent rect. 3 2
60 72.63 precipitation 0.1 270 < th dose dependent rect. 3 2
61 72.64 wind 9.0 270 < th dose dependent rect. 1 6
84 73.28 atmosphere 1015.0 90 < th dose dependent rect. 4 3
93 73.53 radiation 20.0 270 < th dose independent rect. 1 6
97 73.58 atmosphere 1015.0 270 < th dose independent rect. 6 20
121 73.62 temperature 10.0 270 > th dose independent rect. 7 18
131 73.75 radiation 20.0 90 < th dose independent rect. 4 3
135 73.79 wind 7.0 270 < th dose independent rect. 3 2
136 73.79 radiation 1.0 270 < th dose independent rect. 3 2
138 73.80 atmosphere 1010.0 90 < th dose independent rect. 4 3
140 73.82 temperature 10.0 270 > th dose independent rect. 3 2
142 73.82 temperature 30.0 270 < th dose independent rect. 3 2
143 73.82 humidity 50.0 270 > th dose independent rect. 3 2
146 73.82 atmosphere 995.0 270 > th dose independent rect. 3 2
152 73.82 temperature 10.0 270 > th dose independent rect. 5 22
153 73.83 radiation 10.0 270 < th dose dependent rect. 3 2
157 73.83 radiation 40.0 270 < th dose dependent rect. 1 6
173 73.91 temperature 10.0 90 > th dose dependent rect. 21 7
179 73.99 wind 3.0 90 < th dose independent rect. 3 6
181 74.01 wind 9.0 270 < th dose independent rect. 5 22
187 74.06 atmosphere 1015.0 270 < th dose independent rect. 7 18
214 74.34 atmosphere 1015.0 270 < th dose dependent rect. 2 4
219 74.39 precipitation 0.1 270 < th dose independent rect. 7 18
220 74.39 precipitation 0.1 270 < th dose dependent rect. 7 18
344 76.04 wind 3.0 90 < th dose dependent rect. 3 8
381 76.78 atmosphere 995.0 90 > th dose independent rect. 7 21
389 76.87 temperature 15.0 270 > th dose dependent rect. 23 1
401 77.11 radiation 30.0 270 < th dose independent rect. 15 15
432 77.52 radiation 40.0 270 < th dose dependent rect. 15 15
444 77.65 temperature 15.0 30 > th dose dependent rect. 23 5
468 77.94 precipitation 0.1 270 < th dose independent rect. 1 20
470 77.94 precipitation 0.1 270 < th dose dependent rect. 1 20
514 78.07 precipitation 0.1 270 < th dose independent rect. 6 9
515 78.07 wind 1.0 270 > th dose independent rect. 7 18
516 78.07 precipitation 0.1 270 < th dose dependent rect. 6 9
523 78.13 temperature 10.0 270 > th dose independent rect. 6 9
524 78.13 atmosphere 1015.0 270 < th dose independent rect. 6 9
525 78.13 temperature 10.0 270 > th dose independent rect. 15 15
529 78.15 wind 7.0 270 < th dose independent rect. 21 4
534 78.17 atmosphere 1015.0 270 < th dose independent rect. 21 4
545 78.24 temperature 20.0 270 > th dose independent rect. 21 4
548 78.26 atmosphere 995.0 270 > th dose independent rect. 6 9
559 78.32 wind 9.0 270 < th dose independent rect. 6 9
566 78.36 temperature 10.0 270 > th dose independent rect. 21 4
567 78.36 temperature 30.0 270 < th dose independent rect. 21 4
568 78.36 humidity 50.0 270 > th dose independent rect. 21 4
571 78.36 atmosphere 995.0 270 > th dose independent rect. 21 4
572 78.36 radiation 1.0 270 < th dose independent rect. 21 4
577 78.36 temperature 10.0 270 > th dose independent rect. 1 20
578 78.36 radiation 1.0 270 < th dose dependent rect. 21 4
583 78.37 precipitation 0.1 270 < th dose independent rect. 21 4
585 78.37 precipitation 0.1 270 < th dose dependent rect. 21 4
588 78.40 wind 9.0 270 < th dose independent rect. 15 15
612 78.65 wind 9.0 270 < th dose independent rect. 1 20
621 78.77 precipitation 0.1 270 < th dose independent rect. 15 15
623 78.77 precipitation 0.1 270 < th dose dependent rect. 15 15
635 78.86 wind 9.0 90 < th dose independent rect. 9 18
637 78.87 temperature 15.0 90 > th dose independent rect. 9 18
639 78.89 wind 9.0 90 < th dose independent rect. 21 7
641 78.91 temperature 10.0 90 > th dose independent rect. 21 7
642 78.91 temperature 30.0 90 < th dose independent rect. 21 7
643 78.91 humidity 50.0 90 > th dose independent rect. 21 7
646 78.91 atmosphere 995.0 90 > th dose independent rect. 21 7
647 78.91 radiation 1.0 90 < th dose independent rect. 21 7
652 78.91 temperature 10.0 90 > th dose independent rect. 4 17
653 78.91 atmosphere 1015.0 90 < th dose independent rect. 4 17
654 78.91 radiation 1.0 90 < th dose dependent rect. 21 7
660 78.93 humidity 50.0 270 > th dose independent rect. 6 9
668 78.95 wind 9.0 270 < th dose independent rect. 21 14
686 78.99 humidity 50.0 270 > th dose independent rect. 21 14
710 79.08 temperature 10.0 270 > th dose independent rect. 11 10
711 79.08 temperature 10.0 270 > th dose independent rect. 21 14
712 79.08 atmosphere 995.0 270 > th dose independent rect. 21 14
731 79.20 atmosphere 995.0 270 > th dose independent rect. 15 15
745 79.25 atmosphere 995.0 270 > th dose independent rect. 7 18
757 79.30 wind 9.0 90 < th dose independent rect. 4 17
760 79.31 wind 3.0 90 < th dose dependent rect. 4 14
782 79.45 precipitation 0.1 90 < th dose independent rect. 4 17
784 79.45 precipitation 0.1 90 < th dose dependent rect. 4 17
806 79.51 wind 9.0 270 < th dose independent rect. 11 10
808 79.53 precipitation 0.1 90 < th dose independent rect. 21 7
810 79.53 precipitation 0.1 270 < th dose independent rect. 2 15
811 79.53 precipitation 0.1 90 < th dose dependent rect. 21 7
812 79.53 precipitation 0.1 270 < th dose dependent rect. 2 15
822 79.56 wind 3.0 90 < th dose dependent rect. 4 17
827 79.58 atmosphere 1015.0 90 < th dose independent rect. 21 7
833 79.62 radiation 1.0 90 > th dose independent rect. 4 2
865 79.76 radiation 1.0 10 > th dose independent rect. 5 2
907 79.89 radiation 1.0 10 < th dose dependent sin 11 NA
920 79.95 atmosphere 995.0 270 > th dose independent rect. 1 20
922 79.96 wind 7.0 270 < th dose independent rect. 18 8
933 80.02 atmosphere 1015.0 270 < th dose independent rect. 1 20
948 80.10 radiation 10.0 270 < th dose independent rect. 18 8
950 80.10 humidity 50.0 270 > th dose independent rect. 6 20
964 80.15 temperature 10.0 270 > th dose independent rect. 18 8
965 80.15 humidity 50.0 270 > th dose independent rect. 18 8
969 80.15 temperature 10.0 270 > th dose independent rect. 2 16
970 80.15 atmosphere 1015.0 270 < th dose independent rect. 2 16
977 80.17 radiation 40.0 270 < th dose dependent rect. 18 8