Os05g0435800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Subtilisin-like protease.
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Os05g0435800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Subtilisin-like protease.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 439.14 | 0.985 | 6.04 | -2.23 | 1.68 | 2.1 | 1.4 | 1.55 | -1.05 | 8.67 | 26.31 | 5449 | -- | -- |
| 440.41 | 0.977 | 6.08 | -2.5 | 1.63 | 2.2 | 1.43 | -- | -1.13 | 8.67 | 26.34 | 5438 | -- | -- |
| 445.38 | 0.983 | 6.03 | -2.12 | 1.66 | 2.06 | -- | 1.76 | -1.04 | 8.8 | 26.4 | 5480 | -- | -- |
| 446.02 | 0.984 | 6.08 | -2.55 | 1.66 | 2.26 | -- | -- | -1.12 | 8.78 | 26.4 | 5447 | -- | -- |
| 589.1 | 1.13 | 6.08 | -2.13 | -- | 1.99 | -- | 1.6 | -1.06 | -- | 26.51 | 5720 | -- | -- |
| 629.41 | 1.18 | 6.07 | -1.85 | 1.61 | -- | 1.53 | -- | -1.06 | 8.1 | -- | -- | -- | -- |
| 636.13 | 1.18 | 6.07 | -1.81 | 1.6 | -- | -- | -- | -1.06 | 8.29 | -- | -- | -- | -- |
| 589.68 | 1.13 | 6.14 | -2.56 | -- | 2.13 | -- | -- | -1.17 | -- | 26.58 | 5709 | -- | -- |
| 604.05 | 1.14 | 5.98 | -- | 1.68 | 1.86 | -- | -- | -0.638 | 8.78 | 28.32 | 3935 | -- | -- |
| 778.65 | 1.3 | 6.11 | -1.8 | -- | -- | -- | -- | -1.04 | -- | -- | -- | -- | -- |
| 722.18 | 1.26 | 6.03 | -- | 1.6 | -- | -- | -- | -0.858 | 8.37 | -- | -- | -- | -- |
| 742.13 | 1.27 | 6.05 | -- | -- | 1.54 | -- | -- | -0.744 | -- | 28.5 | 5707 | -- | -- |
| 863.75 | 1.37 | 6.07 | -- | -- | -- | -- | -- | -0.843 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 419.68 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 2 | 420.25 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 4 | 420.94 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 5 | 421.63 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 6 | 421.68 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 9 | 422.43 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 10 | 422.52 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 29 | 425.18 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 31 | 425.33 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 6 |
| 72 | 428.44 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 12 |
| 80 | 428.58 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 7 |
| 89 | 428.79 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 92 | 428.92 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 94 | 429.09 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 129 | 429.32 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 4 |
| 189 | 430.38 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 192 | 430.45 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 4 |
| 205 | 430.76 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 6 |
| 242 | 431.35 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 6 |
| 243 | 431.36 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 4 | 6 |
| 276 | 432.03 | humidity | 70.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 295 | 432.37 | humidity | 70.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 347 | 433.45 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 411 | 434.39 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 15 |
| 424 | 434.44 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 474 | 435.26 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 12 |
| 499 | 435.43 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 516 | 435.70 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 8 | 12 |
| 525 | 435.85 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 546 | 436.22 | humidity | 60.0 | 14400 | > th | dose dependent | sin | 19 | NA |
| 585 | 436.70 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 740 | 438.71 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 787 | 439.20 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 788 | 439.20 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 802 | 439.33 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 897 | 440.17 | humidity | 90.0 | 14400 | < th | dose dependent | sin | 17 | NA |