Os05g0433100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1218 family protein.
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Os05g0433100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1218 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.38 | 0.309 | 2.87 | -0.0602 | 0.0214 | 0.77 | 0.138 | -2.17 | 0.00763 | 14.9 | 0.6828 | 9 | -- | -- |
| 45.83 | 0.315 | 2.87 | -0.0478 | 0.0268 | 0.578 | 0.248 | -- | 0.000258 | 13.8 | 0.4257 | 10 | -- | -- |
| 43.43 | 0.307 | 2.87 | -0.0567 | 0.0241 | 0.767 | -- | -2.22 | 0.00821 | 12.6 | 0.67 | 8 | -- | -- |
| 45.74 | 0.315 | 2.87 | -0.0449 | 0.0349 | 0.523 | -- | -- | -0.0107 | 12.7 | 0.4053 | 8 | -- | -- |
| 43.47 | 0.307 | 2.87 | -0.0571 | -- | 0.758 | -- | -2.22 | 0.00748 | -- | 0.6697 | 8 | -- | -- |
| 47.09 | 0.322 | 2.87 | -0.0343 | 0.047 | -- | -0.261 | -- | -0.0188 | 5.15 | -- | -- | -- | -- |
| 47.23 | 0.322 | 2.87 | -0.0337 | 0.0519 | -- | -- | -- | -0.0174 | 6.92 | -- | -- | -- | -- |
| 45.8 | 0.315 | 2.87 | -0.0519 | -- | 0.51 | -- | -- | -0.00421 | -- | 0.4174 | 8 | -- | -- |
| 45.78 | 0.315 | 2.87 | -- | 0.04 | 0.507 | -- | -- | -0.009 | 10.6 | 0.4 | 8 | -- | -- |
| 47.37 | 0.322 | 2.87 | -0.0326 | -- | -- | -- | -- | -0.0164 | -- | -- | -- | -- | -- |
| 47.26 | 0.322 | 2.87 | -- | 0.0516 | -- | -- | -- | -0.0136 | 6.96 | -- | -- | -- | -- |
| 45.87 | 0.315 | 2.86 | -- | -- | 0.502 | -- | -- | 0.00126 | -- | 0.4424 | 8 | -- | -- |
| 47.4 | 0.321 | 2.87 | -- | -- | -- | -- | -- | -0.0128 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.40 | humidity | 60 | 270 | < th | dose independent | rect. | 8 | 1 |
| 27 | 27.40 | humidity | 60 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 134 | 28.43 | humidity | 60 | 1440 | > th | dose independent | rect. | 24 | 9 |
| 135 | 28.44 | humidity | 60 | 1440 | > th | dose independent | rect. | 3 | 6 |
| 136 | 28.47 | humidity | 60 | 1440 | > th | dose independent | rect. | 20 | 13 |
| 138 | 28.52 | humidity | 60 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 139 | 28.64 | humidity | 60 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 147 | 29.03 | humidity | 60 | 90 | < th | dose independent | rect. | 18 | 15 |
| 148 | 29.03 | wind | 1 | 10 | < th | dose dependent | rect. | 7 | 3 |
| 153 | 29.05 | humidity | 60 | 30 | < th | dose independent | rect. | 16 | 18 |
| 175 | 29.12 | humidity | 60 | 30 | < th | dose independent | rect. | 9 | 1 |
| 220 | 29.12 | humidity | 60 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 331 | 29.15 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 355 | 29.30 | wind | 1 | 10 | < th | dose independent | rect. | 7 | 3 |
| 393 | 29.48 | wind | 1 | 10 | < th | dose dependent | rect. | 7 | 9 |
| 402 | 29.50 | radiation | 40 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 534 | 30.40 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 7 |
| 672 | 31.27 | radiation | 40 | 10 | > th | dose dependent | sin | 12 | NA |
| 811 | 32.44 | radiation | 40 | 10 | > th | dose independent | rect. | 9 | 1 |
| 899 | 33.30 | wind | 1 | 10 | < th | dose dependent | sin | 21 | NA |
| 932 | 33.37 | wind | 1 | 10 | < th | dose independent | sin | 21 | NA |