Os05g0432400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1682 family protein.
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Os05g0432400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1682 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9.41 | 0.144 | 12.3 | 1.1 | 0.456 | -0.447 | -0.0168 | 0.943 | 0.325 | 23.6 | 23.54 | 1387 | -- | -- |
| 9.95 | 0.147 | 12.3 | 0.9 | 0.436 | -0.391 | -0.0187 | -- | 0.336 | 23.6 | 21.64 | 8766 | -- | -- |
| 9.41 | 0.143 | 12.3 | 1.1 | 0.456 | -0.447 | -- | 0.941 | 0.325 | 23.6 | 23.54 | 1388 | -- | -- |
| 9.88 | 0.146 | 12.3 | 0.87 | 0.439 | -0.376 | -- | -- | 0.327 | 23.4 | 22.64 | 8835 | -- | -- |
| 16.92 | 0.193 | 12.3 | 0.891 | -- | -0.639 | -- | 0.584 | 0.292 | -- | 23.06 | 1568 | -- | -- |
| 14.8 | 0.18 | 12.3 | 0.691 | 0.426 | -- | -0.0269 | -- | 0.179 | 23.3 | -- | -- | -- | -- |
| 14.8 | 0.18 | 12.3 | 0.692 | 0.426 | -- | -- | -- | 0.18 | 23.3 | -- | -- | -- | -- |
| 16.87 | 0.192 | 12.3 | 0.811 | -- | -0.61 | -- | -- | 0.272 | -- | 22.63 | 8837 | -- | -- |
| 26.12 | 0.239 | 12.4 | -- | 0.371 | -0.274 | -- | -- | 0.139 | 22.6 | 22.64 | 8835 | -- | -- |
| 26.19 | 0.239 | 12.3 | 0.703 | -- | -- | -- | -- | 0.184 | -- | -- | -- | -- | -- |
| 27.41 | 0.245 | 12.4 | -- | 0.434 | -- | -- | -- | 0.103 | 23.4 | -- | -- | -- | -- |
| 33.6 | 0.27 | 12.4 | -- | -- | 0.38 | -- | -- | -0.00819 | -- | 9.739 | 47520 | -- | -- |
| 39.21 | 0.292 | 12.4 | -- | -- | -- | -- | -- | 0.106 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 9.15 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 2 | 9.15 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 3 | 9.15 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 4 | 9.27 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 8 | 9.44 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 10 | 7 |
| 19 | 9.45 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 20 | NA |
| 85 | 9.50 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 92 | 9.50 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 163 | 9.52 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 20 | 22 |
| 178 | 9.53 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 179 | 9.53 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 327 | 9.64 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 15 | 8 |
| 346 | 9.65 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 389 | 9.69 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 9 | 9 |
| 424 | 9.72 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 533 | 9.78 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 15 | 8 |
| 545 | 9.78 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 5 | 14 |
| 560 | 9.79 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 584 | 9.79 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 18 |
| 586 | 9.80 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 603 | 9.81 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 628 | 9.81 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 629 | 9.81 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 633 | 9.82 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 14 | NA |
| 634 | 9.82 | radiation | 1.0 | 1440 | < th | dose dependent | no | NA | NA |
| 692 | 9.82 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 23 |
| 713 | 9.83 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 716 | 9.83 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 717 | 9.84 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 769 | 9.85 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 18 |
| 774 | 9.85 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 20 |
| 785 | 9.86 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 6 | 17 |
| 787 | 9.86 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 23 |
| 800 | 9.86 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 12 |
| 806 | 9.86 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 15 |
| 815 | 9.87 | temperature | 25.0 | 1440 | > th | dose independent | sin | 18 | NA |
| 821 | 9.87 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 23 | NA |
| 842 | 9.87 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 870 | 9.89 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 7 | 23 |