FiT-DB / Search/ Help/ Sample detail

Os05g0429900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to MybHv5 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.7 (0.0418) R2 : 0.864
β1 : -0.866 (0.153) R2dD : 0.011 R2D : -0.00926
β2 : 4.12 (0.113) R2dC : 0.466 R2C : 0.675
β3 : 3.55 (0.157) R2dE : 0.174 R2E : 0.368
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.548 (0.0893) R2dN8 : 0.0146 R2N8 : -0.00143
σ : 0.78
deviance : 280.5
__
_____
C
peak time of C : 20.7
E
wheather : temperature
threshold : 6.854
memory length : 211
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 12.1
open length of G : 4.92

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
269.36 0.771 9.69 -0.983 4.1 3.8 1.64 -3.23 -0.535 20.7 8.867 259 12.1 4.18
278.65 0.777 9.69 -1.03 4.14 3.68 1.01 -- -0.544 20.7 9.341 208 12.3 4.74
276.14 0.774 9.69 -1.04 4.09 3.61 -- -2.13 -0.526 20.7 8.176 209 12.2 4.8
280.5 0.78 9.7 -0.866 4.12 3.55 -- -- -0.548 20.7 6.854 211 12.1 4.92
405.23 0.938 9.56 -0.779 -- 5.01 -- -0.715 -0.487 -- -28.85 682 11.4 4.65
455.88 1 9.68 -0.699 5.42 -- 1.05 -- -0.34 19.6 -- -- -- --
458.97 1 9.67 -0.724 5.43 -- -- -- -0.338 19.6 -- -- -- --
397.94 0.929 9.57 -0.868 -- 5 -- -- -0.538 -- -15.55 682 11.5 4.55
300.54 0.807 9.65 -- 4.17 3.41 -- -- -0.384 20.6 3.999 202 12.3 4.73
2039.18 2.11 9.54 -0.8 -- -- -- -- -0.42 -- -- -- -- --
472.77 1.02 9.66 -- 5.43 -- -- -- -0.257 19.6 -- -- -- --
421.41 0.956 9.54 -- -- 4.89 -- -- -0.42 -- -24.65 679 11.5 4.47
2056.08 2.12 9.52 -- -- -- -- -- -0.331 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 270.65 temperature 10.0 270 > th dose dependent rect. 12 4
2 272.89 temperature 20.0 270 > th dose independent rect. 12 4
4 277.14 wind 9.0 270 < th dose independent rect. 16 20
5 278.24 wind 1.0 270 > th dose independent rect. 12 4
6 278.60 temperature 20.0 270 > th dose independent rect. 13 2
7 279.65 precipitation 0.1 270 < th dose independent rect. 16 20
8 279.65 precipitation 0.1 270 < th dose dependent rect. 16 20
9 280.44 temperature 10.0 270 > th dose dependent rect. 13 2
10 280.50 precipitation 0.1 270 < th dose independent rect. 12 4
11 280.50 precipitation 0.1 270 < th dose dependent rect. 12 4
12 280.66 temperature 10.0 270 > th dose independent rect. 12 4
14 280.66 atmosphere 1015.0 270 < th dose independent rect. 12 4
15 280.66 temperature 10.0 270 > th dose independent rect. 16 20
16 280.84 wind 9.0 270 < th dose independent rect. 12 4
18 281.14 atmosphere 995.0 270 > th dose independent rect. 16 20
20 281.26 humidity 50.0 270 > th dose independent rect. 16 20
21 281.64 precipitation 0.1 270 < th dose independent rect. 17 18
22 281.64 precipitation 0.1 270 < th dose dependent rect. 17 18
23 281.72 radiation 1.0 270 > th dose independent rect. 11 6
25 282.10 radiation 1.0 270 > th dose independent rect. 12 4
26 282.19 wind 1.0 270 > th dose independent rect. 11 6
29 282.33 humidity 50.0 270 > th dose independent rect. 17 18
30 282.43 wind 9.0 270 < th dose independent rect. 17 18
31 282.44 wind 9.0 270 < th dose independent rect. 15 22
32 282.63 humidity 50.0 270 > th dose independent rect. 13 2
33 282.99 precipitation 0.1 270 < th dose independent rect. 11 6
34 282.99 precipitation 0.1 270 < th dose dependent rect. 11 6
35 283.02 radiation 1.0 90 > th dose independent rect. 13 6
45 283.17 atmosphere 995.0 270 > th dose independent rect. 17 18
48 283.64 temperature 10.0 270 > th dose independent rect. 11 6
49 283.64 atmosphere 1015.0 270 < th dose independent rect. 11 6
50 283.64 temperature 10.0 270 > th dose independent rect. 17 18
53 284.56 wind 1.0 270 > th dose independent rect. 13 2
55 285.04 temperature 10.0 270 > th dose independent rect. 13 2
57 285.04 atmosphere 1010.0 270 < th dose independent rect. 13 2
59 285.04 temperature 10.0 270 > th dose independent rect. 15 22
60 285.15 precipitation 0.1 270 < th dose independent rect. 13 2
61 285.15 precipitation 0.1 270 < th dose dependent rect. 13 2
63 285.36 wind 9.0 270 < th dose independent rect. 13 2
67 286.31 precipitation 0.1 270 < th dose independent rect. 15 22
68 286.31 precipitation 0.1 270 < th dose dependent rect. 15 22
69 286.66 wind 9.0 270 < th dose independent rect. 11 6
71 286.81 humidity 90.0 270 < th dose independent rect. 12 4
76 288.11 humidity 50.0 270 > th dose independent rect. 12 4
77 288.18 temperature 15.0 270 > th dose independent rect. 7 14
78 288.24 atmosphere 995.0 270 > th dose independent rect. 12 4
79 288.36 radiation 30.0 270 < th dose dependent rect. 21 11
81 289.25 radiation 1.0 270 > th dose independent rect. 13 2
87 289.85 atmosphere 995.0 270 > th dose independent rect. 13 2
96 290.63 temperature 10.0 270 > th dose dependent rect. 4 8
144 295.12 wind 1.0 270 > th dose dependent rect. 12 4
175 297.33 wind 1.0 270 > th dose dependent rect. 13 2
176 297.36 atmosphere 995.0 270 > th dose independent rect. 11 6
178 297.42 humidity 90.0 270 < th dose independent rect. 13 2
181 297.64 humidity 50.0 270 > th dose dependent rect. 21 10
194 298.11 humidity 70.0 270 > th dose independent rect. 21 10
197 298.40 wind 9.0 270 < th dose independent rect. 7 14
199 298.47 radiation 30.0 270 < th dose independent rect. 21 10
200 298.53 temperature 10.0 270 > th dose independent rect. 21 10
201 298.53 temperature 30.0 270 < th dose independent rect. 21 10
202 298.53 humidity 50.0 270 > th dose independent rect. 21 10
204 298.53 atmosphere 995.0 270 > th dose independent rect. 21 10
210 298.89 wind 9.0 270 < th dose independent rect. 21 10
228 299.75 wind 7.0 10 < th dose independent rect. 19 19
229 299.82 temperature 10.0 10 > th dose dependent rect. 14 5
230 299.83 radiation 1.0 90 > th dose independent sin 16 NA
232 299.91 radiation 1.0 90 < th dose independent sin 16 NA
239 300.54 radiation 1.0 90 < th dose dependent sin 16 NA
256 302.74 radiation 1.0 270 > th dose independent rect. 17 19
259 302.89 temperature 15.0 90 > th dose dependent rect. 7 6
301 304.87 radiation 40.0 30 < th dose independent rect. 12 7
317 305.72 radiation 1.0 270 > th dose independent rect. 4 8
328 305.75 temperature 15.0 10 > th dose dependent rect. 7 7
342 306.57 temperature 10.0 270 > th dose dependent rect. 7 4
373 308.07 temperature 20.0 10 > th dose independent rect. 14 5
376 308.09 atmosphere 1015.0 270 < th dose independent rect. 7 14
377 308.16 humidity 90.0 10 < th dose independent rect. 14 5
407 309.83 precipitation 0.1 10 < th dose independent rect. 19 19
408 309.83 precipitation 0.1 10 < th dose dependent rect. 19 19
422 310.80 atmosphere 1015.0 270 < th dose dependent rect. 13 2
423 310.85 wind 1.0 10 > th dose dependent rect. 14 5
424 310.85 humidity 90.0 90 < th dose dependent rect. 19 18
434 311.26 temperature 15.0 270 > th dose independent rect. 4 8
435 311.33 temperature 10.0 90 > th dose dependent rect. 19 18
436 311.35 precipitation 0.1 270 < th dose independent rect. 7 14
437 311.35 precipitation 0.1 270 < th dose dependent rect. 7 14
441 311.56 radiation 1.0 270 > th dose dependent rect. 12 5
444 311.59 wind 1.0 10 > th dose independent rect. 14 5
445 311.66 humidity 50.0 90 > th dose dependent rect. 23 10
447 311.69 temperature 20.0 270 > th dose independent rect. 7 4
460 311.84 wind 9.0 10 < th dose independent rect. 14 5
468 312.05 atmosphere 995.0 270 > th dose dependent rect. 12 4
483 312.13 precipitation 0.1 10 < th dose independent rect. 14 5
484 312.13 precipitation 0.1 10 < th dose dependent rect. 14 5
501 312.37 temperature 10.0 270 > th dose dependent rect. 12 16
511 312.55 precipitation 0.1 270 < th dose independent rect. 21 10
512 312.55 precipitation 0.1 270 < th dose dependent rect. 21 10
521 312.84 temperature 10.0 10 > th dose independent rect. 14 5
523 312.84 atmosphere 1010.0 10 < th dose independent rect. 14 5
525 312.84 temperature 10.0 10 > th dose independent rect. 19 19
526 312.84 atmosphere 995.0 10 > th dose independent rect. 19 19
547 313.66 atmosphere 995.0 270 > th dose dependent rect. 13 2
628 315.62 temperature 10.0 1440 > th dose independent rect. 15 4
632 315.62 temperature 10.0 1440 > th dose independent rect. 19 20
636 315.63 radiation 20.0 270 < th dose independent rect. 16 9
637 315.63 wind 1.0 270 > th dose independent rect. 16 20
642 315.79 temperature 30.0 270 < th dose independent rect. 17 18
667 316.04 atmosphere 1015.0 270 < th dose dependent rect. 12 4
703 316.63 wind 7.0 270 < th dose independent rect. 4 8
734 317.35 atmosphere 995.0 1440 > th dose independent rect. 19 19
749 317.79 humidity 90.0 90 < th dose independent rect. 18 19
785 319.26 atmosphere 995.0 270 > th dose independent rect. 7 14
787 319.29 wind 1.0 270 > th dose independent rect. 17 18
797 319.45 humidity 90.0 90 < th dose independent rect. 7 6
798 319.48 precipitation 0.1 270 < th dose independent rect. 3 9
799 319.48 precipitation 0.1 270 < th dose dependent rect. 3 9
812 319.86 wind 1.0 270 > th dose independent rect. 16 9
813 319.89 humidity 90.0 90 < th dose independent rect. 3 10
855 320.73 radiation 20.0 270 < th dose independent rect. 16 7
858 320.89 atmosphere 1015.0 10 < th dose dependent rect. 14 5
866 321.25 temperature 10.0 10 > th dose dependent rect. 19 19
867 321.26 temperature 10.0 270 > th dose independent rect. 16 9
868 321.26 radiation 40.0 270 < th dose independent rect. 16 9
869 321.26 temperature 10.0 270 > th dose independent rect. 1 15
870 321.26 atmosphere 1015.0 270 < th dose independent rect. 1 15
875 321.45 radiation 30.0 270 < th dose dependent rect. 16 7
876 321.49 humidity 90.0 270 < th dose dependent rect. 13 2
890 321.68 humidity 90.0 270 < th dose dependent rect. 12 4
900 321.83 humidity 50.0 270 > th dose independent rect. 16 9
914 321.97 radiation 40.0 270 < th dose dependent rect. 16 9
958 322.84 humidity 50.0 270 > th dose independent rect. 16 7
984 323.18 atmosphere 1015.0 270 < th dose independent rect. 16 20
999 323.37 wind 9.0 270 < th dose independent rect. 16 9