Os05g0427200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 31 protein.
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Os05g0427200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 31 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 175.92 | 0.623 | 9.53 | -1.31 | 1.22 | 2.42 | 0.767 | -11.8 | -0.456 | 7.46 | 29.89 | 4130 | -- | -- |
| 170.15 | 0.608 | 9.55 | -1.66 | 1.26 | 1.76 | 0.794 | -- | 0.319 | 7.52 | 21.7 | 27549 | -- | -- |
| 177.5 | 0.621 | 9.52 | -1.27 | 1.21 | 2.43 | -- | -12 | -0.45 | 7.47 | 29.88 | 4092 | -- | -- |
| 171.29 | 0.61 | 9.56 | -1.63 | 1.25 | 1.8 | -- | -- | 0.339 | 7.55 | 21.7 | 28900 | -- | -- |
| 248.05 | 0.734 | 9.54 | -1.28 | -- | 2.32 | -- | -10.6 | -0.14 | -- | 29.4 | 3623 | -- | -- |
| 220.27 | 0.696 | 9.74 | -3.66 | 1.26 | -- | 0.712 | -- | -0.482 | 7.72 | -- | -- | -- | -- |
| 221.71 | 0.697 | 9.74 | -3.64 | 1.26 | -- | -- | -- | -0.483 | 7.74 | -- | -- | -- | -- |
| 255.63 | 0.745 | 9.59 | -1.63 | -- | 1.81 | -- | -- | 0.369 | -- | 22 | 27921 | -- | -- |
| 187.25 | 0.637 | 9.44 | -- | 1.25 | 2.92 | -- | -- | 0.875 | 7.53 | 21.07 | 47520 | -- | -- |
| 307.88 | 0.82 | 9.77 | -3.62 | -- | -- | -- | -- | -0.464 | -- | -- | -- | -- | -- |
| 570.73 | 1.12 | 9.65 | -- | 1.24 | -- | -- | -- | -0.0773 | 7.94 | -- | -- | -- | -- |
| 271.23 | 0.767 | 9.47 | -- | -- | 2.91 | -- | -- | 0.891 | -- | 21.03 | 47520 | -- | -- |
| 654.13 | 1.19 | 9.68 | -- | -- | -- | -- | -- | -0.0625 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 158.74 | wind | 1 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 2 | 158.84 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 5 |
| 4 | 159.86 | wind | 1 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 5 | 160.96 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 6 | 161.19 | wind | 1 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 10 | 162.57 | temperature | 20 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 11 | 162.88 | temperature | 20 | 14400 | < th | dose independent | rect. | 4 | 17 |
| 12 | 162.94 | temperature | 20 | 14400 | < th | dose independent | rect. | 4 | 21 |
| 13 | 163.05 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 21 |
| 14 | 163.06 | temperature | 20 | 14400 | > th | dose independent | rect. | 24 | 21 |
| 22 | 163.13 | temperature | 20 | 14400 | > th | dose independent | rect. | 4 | 16 |
| 34 | 163.25 | temperature | 20 | 14400 | < th | dose independent | rect. | 7 | 23 |
| 40 | 163.29 | temperature | 20 | 14400 | > th | dose independent | rect. | 4 | 22 |
| 57 | 163.40 | temperature | 20 | 14400 | < th | dose independent | no | NA | NA |
| 64 | 163.43 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 4 |
| 66 | 163.44 | temperature | 20 | 14400 | > th | dose independent | rect. | 7 | 23 |
| 68 | 163.44 | temperature | 20 | 14400 | < th | dose independent | rect. | 13 | 23 |
| 88 | 163.49 | temperature | 20 | 14400 | > th | dose independent | rect. | 9 | 23 |
| 89 | 163.50 | temperature | 20 | 14400 | > th | dose independent | no | NA | NA |
| 93 | 163.50 | temperature | 20 | 14400 | < th | dose independent | rect. | 19 | 23 |
| 112 | 163.54 | temperature | 20 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 115 | 163.54 | wind | 1 | 43200 | < th | dose dependent | rect. | 21 | 9 |
| 168 | 163.68 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 176 | 163.69 | wind | 1 | 43200 | < th | dose dependent | sin | 11 | NA |
| 198 | 163.75 | temperature | 20 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 255 | 163.89 | wind | 1 | 43200 | < th | dose dependent | rect. | 14 | 17 |
| 262 | 163.91 | temperature | 20 | 14400 | < th | dose dependent | rect. | 18 | 7 |
| 272 | 163.95 | wind | 1 | 43200 | < th | dose independent | rect. | 21 | 8 |
| 338 | 164.14 | temperature | 20 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 365 | 164.23 | temperature | 20 | 14400 | > th | dose independent | sin | 8 | NA |
| 405 | 164.38 | temperature | 20 | 14400 | < th | dose independent | sin | 11 | NA |
| 450 | 164.50 | temperature | 20 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 475 | 164.58 | temperature | 20 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 507 | 164.67 | wind | 1 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 545 | 164.81 | temperature | 20 | 14400 | < th | dose dependent | sin | 17 | NA |
| 595 | 165.01 | temperature | 20 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 622 | 165.11 | temperature | 20 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 625 | 165.13 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 639 | 165.17 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 5 |
| 667 | 165.27 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 674 | 165.29 | temperature | 25 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 718 | 165.42 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 14 |
| 792 | 165.70 | wind | 1 | 43200 | < th | dose dependent | rect. | 17 | 17 |
| 798 | 165.74 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 7 |
| 816 | 165.81 | radiation | 1 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 834 | 165.90 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 902 | 166.25 | temperature | 25 | 14400 | < th | dose dependent | rect. | 5 | 10 |
| 958 | 166.47 | temperature | 25 | 14400 | < th | dose dependent | sin | 2 | NA |
| 991 | 166.57 | temperature | 25 | 14400 | < th | dose dependent | rect. | 13 | 1 |