Os05g0426300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF231, plant domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0426300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF231, plant domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.73 | 0.238 | 9.88 | 0.473 | 0.904 | -1 | -0.0532 | 1.15 | 0.352 | 1.27 | 21.4 | 1482 | -- | -- |
| 25.48 | 0.235 | 9.89 | 0.285 | 0.892 | -0.973 | -0.00192 | -- | 0.367 | 1.25 | 20.68 | 7367 | -- | -- |
| 25.72 | 0.236 | 9.88 | 0.464 | 0.905 | -0.989 | -- | 1.16 | 0.353 | 1.25 | 21.56 | 1488 | -- | -- |
| 25.47 | 0.235 | 9.89 | 0.29 | 0.89 | -0.976 | -- | -- | 0.369 | 1.25 | 20.66 | 7367 | -- | -- |
| 37.57 | 0.287 | 9.87 | 0.391 | -- | -1.69 | -- | 1.71 | 0.382 | -- | 21.56 | 1488 | -- | -- |
| 56.43 | 0.352 | 9.97 | -0.224 | 0.855 | -- | -0.0846 | -- | 0.0329 | 1.23 | -- | -- | -- | -- |
| 56.46 | 0.352 | 9.97 | -0.221 | 0.855 | -- | -- | -- | 0.0334 | 1.22 | -- | -- | -- | -- |
| 39.25 | 0.293 | 9.9 | 0.125 | -- | -1.63 | -- | -- | 0.312 | -- | 20.45 | 7482 | -- | -- |
| 26.79 | 0.241 | 9.9 | -- | 0.899 | -0.853 | -- | -- | 0.31 | 1.22 | 22.31 | 7352 | -- | -- |
| 101.69 | 0.471 | 9.95 | -0.188 | -- | -- | -- | -- | 0.0508 | -- | -- | -- | -- | -- |
| 57.74 | 0.355 | 9.96 | -- | 0.851 | -- | -- | -- | 0.058 | 1.21 | -- | -- | -- | -- |
| 39.65 | 0.294 | 9.9 | -- | -- | -1.6 | -- | -- | 0.294 | -- | 20.45 | 7482 | -- | -- |
| 102.62 | 0.473 | 9.95 | -- | -- | -- | -- | -- | 0.0716 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.47 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 2 | 25.65 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 16 |
| 44 | 25.90 | temperature | 20 | 1440 | > th | dose dependent | sin | 0 | NA |
| 67 | 25.98 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 74 | 26.00 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 17 |
| 83 | 26.05 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 89 | 26.07 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 95 | 26.09 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 109 | 26.12 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 16 |
| 176 | 26.29 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 188 | 26.31 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 203 | 26.33 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 214 | 26.36 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 226 | 26.38 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 231 | 26.39 | temperature | 20 | 1440 | > th | dose dependent | rect. | 10 | 23 |
| 240 | 26.41 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 16 |
| 254 | 26.44 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 267 | 26.47 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 420 | 26.75 | temperature | 20 | 14400 | > th | dose dependent | sin | 15 | NA |
| 560 | 27.00 | temperature | 25 | 14400 | < th | dose independent | sin | 17 | NA |
| 638 | 27.12 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 18 |
| 658 | 27.14 | temperature | 25 | 14400 | > th | dose independent | sin | 17 | NA |
| 706 | 27.18 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 822 | 27.26 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 17 |
| 851 | 27.28 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 19 |
| 937 | 27.33 | temperature | 20 | 14400 | > th | dose dependent | rect. | 4 | 20 |
| 966 | 27.35 | temperature | 20 | 14400 | > th | dose dependent | no | NA | NA |