Os05g0426200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : No apical meristem (NAM) protein domain containing protein.
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Os05g0426200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : No apical meristem (NAM) protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.03 | 0.342 | 13.1 | 0.49 | 0.861 | 0.357 | -0.263 | -0.675 | 0.457 | 20.9 | 78.44 | 83 | -- | -- |
| 54.61 | 0.344 | 13.1 | 0.455 | 0.849 | 0.318 | -0.437 | -- | 0.442 | 21 | 77.26 | 85 | -- | -- |
| 53.19 | 0.34 | 13.1 | 0.512 | 0.854 | 0.377 | -- | -0.724 | 0.462 | 20.7 | 77.74 | 64 | -- | -- |
| 55.22 | 0.346 | 13.1 | 0.469 | 0.869 | 0.349 | -- | -- | 0.445 | 20.8 | 76.6 | 111 | -- | -- |
| 88.92 | 0.439 | 13.1 | 0.509 | -- | 0.501 | -- | -0.838 | 0.432 | -- | 63 | 3 | -- | -- |
| 57.4 | 0.355 | 13.1 | 0.469 | 0.865 | -- | -0.489 | -- | 0.403 | 22 | -- | -- | -- | -- |
| 58.32 | 0.358 | 13.1 | 0.489 | 0.869 | -- | -- | -- | 0.405 | 22 | -- | -- | -- | -- |
| 91.17 | 0.445 | 13.1 | 0.478 | -- | 0.482 | -- | -- | 0.427 | -- | 63 | 2 | -- | -- |
| 60.77 | 0.363 | 13.1 | -- | 0.898 | 0.39 | -- | -- | 0.404 | 20.7 | 79 | 161 | -- | -- |
| 103.7 | 0.476 | 13.1 | 0.499 | -- | -- | -- | -- | 0.405 | -- | -- | -- | -- | -- |
| 64.62 | 0.376 | 13.1 | -- | 0.871 | -- | -- | -- | 0.35 | 22 | -- | -- | -- | -- |
| 97.25 | 0.459 | 13.1 | -- | -- | 0.49 | -- | -- | 0.375 | -- | 63 | 2 | -- | -- |
| 110.27 | 0.49 | 13.1 | -- | -- | -- | -- | -- | 0.35 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.84 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 2 | 49.87 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 13 | 51.09 | temperature | 25.0 | 10 | < th | dose independent | rect. | 14 | 18 |
| 17 | 51.19 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 10 | 4 |
| 32 | 51.36 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 35 | 51.37 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 12 | 20 |
| 37 | 51.39 | precipitation | 0.1 | 270 | > th | dose independent | sin | 10 | NA |
| 40 | 51.47 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 49 | 51.57 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 52 | 51.65 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 7 |
| 54 | 51.65 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 7 |
| 56 | 51.66 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 64 | 51.74 | radiation | 1.0 | 270 | > th | dose independent | rect. | 16 | 22 |
| 86 | 51.80 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 98 | 51.85 | wind | 7.0 | 720 | < th | dose independent | rect. | 13 | 15 |
| 101 | 51.86 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 19 | 14 |
| 104 | 51.87 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 107 | 51.88 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 19 | 11 |
| 117 | 51.90 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 125 | 51.93 | wind | 7.0 | 720 | < th | dose independent | rect. | 16 | 9 |
| 127 | 51.93 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 9 | NA |
| 133 | 51.97 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 158 | 52.04 | precipitation | 0.1 | 270 | < th | dose independent | sin | 6 | NA |
| 159 | 52.04 | temperature | 30.0 | 10 | < th | dose independent | rect. | 8 | 6 |
| 163 | 52.04 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 6 | NA |
| 165 | 52.04 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 14 | 18 |
| 168 | 52.06 | wind | 7.0 | 720 | < th | dose independent | rect. | 15 | 14 |
| 172 | 52.09 | wind | 5.0 | 720 | > th | dose independent | rect. | 21 | 2 |
| 178 | 52.10 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 196 | 52.12 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 231 | 52.25 | wind | 3.0 | 720 | > th | dose dependent | rect. | 21 | 2 |
| 234 | 52.28 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 238 | 52.29 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 245 | 52.30 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 20 |
| 251 | 52.31 | humidity | 70.0 | 90 | > th | dose dependent | sin | 7 | NA |
| 263 | 52.33 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 277 | 52.36 | humidity | 50.0 | 90 | > th | dose dependent | sin | 8 | NA |
| 279 | 52.36 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 14 | 10 |
| 287 | 52.38 | humidity | 70.0 | 10 | > th | dose dependent | sin | 6 | NA |
| 296 | 52.39 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 17 |
| 313 | 52.40 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 316 | 52.41 | precipitation | 0.1 | 90 | < th | dose independent | sin | 4 | NA |
| 320 | 52.41 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 4 | NA |
| 336 | 52.44 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 21 |
| 350 | 52.47 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 16 |
| 365 | 52.49 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 366 | 52.49 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 13 |
| 369 | 52.49 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 19 | NA |
| 393 | 52.51 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 12 | 18 |
| 394 | 52.51 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 413 | 52.54 | humidity | 90.0 | 30 | > th | dose independent | rect. | 5 | 5 |
| 416 | 52.54 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 11 |
| 424 | 52.55 | humidity | 90.0 | 30 | > th | dose independent | rect. | 5 | 3 |
| 425 | 52.55 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 12 |
| 428 | 52.55 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 24 | 16 |
| 443 | 52.57 | wind | 1.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 462 | 52.58 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 497 | 52.61 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 13 | 15 |
| 499 | 52.61 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 13 | 15 |
| 509 | 52.62 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 5 | 14 |
| 523 | 52.63 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 23 | 20 |
| 524 | 52.63 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 21 | 22 |
| 526 | 52.64 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 552 | 52.65 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 3 |
| 566 | 52.66 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 5 | 11 |
| 570 | 52.66 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 580 | 52.67 | humidity | 90.0 | 90 | > th | dose independent | rect. | 23 | 10 |
| 592 | 52.68 | humidity | 90.0 | 30 | > th | dose independent | sin | 6 | NA |
| 601 | 52.68 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 21 | 10 |
| 615 | 52.69 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 4 |
| 642 | 52.71 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 656 | 52.72 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 22 | 20 |
| 659 | 52.73 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 696 | 52.75 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 21 | 20 |
| 727 | 52.77 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 15 |
| 752 | 52.78 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 1 | 7 |
| 758 | 52.79 | humidity | 80.0 | 1440 | > th | dose independent | sin | 1 | NA |
| 765 | 52.79 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 781 | 52.81 | radiation | 1.0 | 720 | < th | dose independent | rect. | 9 | 15 |
| 804 | 52.83 | wind | 7.0 | 720 | < th | dose independent | sin | 14 | NA |
| 815 | 52.84 | humidity | 80.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 833 | 52.85 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 18 | 6 |
| 843 | 52.86 | radiation | 1.0 | 720 | < th | dose independent | rect. | 13 | 11 |
| 847 | 52.86 | temperature | 20.0 | 10 | > th | dose independent | rect. | 12 | 20 |
| 850 | 52.86 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 877 | 52.88 | wind | 7.0 | 720 | < th | dose independent | rect. | 16 | 17 |
| 900 | 52.89 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 902 | 52.90 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 904 | 52.90 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 906 | 52.90 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 961 | 52.90 | wind | 7.0 | 720 | < th | dose independent | rect. | 16 | 19 |
| 965 | 52.90 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 967 | 52.90 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 969 | 52.90 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |