Os05g0425600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os05g0425600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.36 | 0.413 | 2.87 | 0.0396 | 0.14 | 2.62 | -0.439 | -11.5 | -0.0216 | 5.07 | 0.486 | 259 | -- | -- |
| 81.44 | 0.424 | 2.91 | -0.00659 | 0.138 | 0.5 | -0.341 | -- | -0.0136 | 4.44 | 0.486 | 259 | -- | -- |
| 77.84 | 0.411 | 2.87 | 0.0402 | 0.136 | 2.55 | -- | -11.4 | -0.0199 | 5 | 0.4994 | 259 | -- | -- |
| 80.64 | 0.418 | 2.91 | -0.0489 | 0.116 | -0.698 | -- | -- | -0.000977 | 4.2 | 0.1767 | 273 | -- | -- |
| 78.83 | 0.414 | 2.87 | 0.041 | -- | 2.48 | -- | -11 | -0.0152 | -- | 0.4199 | 259 | -- | -- |
| 81.76 | 0.424 | 2.91 | -0.0147 | 0.133 | -- | -0.353 | -- | -0.0117 | 4.45 | -- | -- | -- | -- |
| 82.07 | 0.424 | 2.91 | -0.0123 | 0.131 | -- | -- | -- | -0.00982 | 3.81 | -- | -- | -- | -- |
| 81.57 | 0.421 | 2.91 | -0.0531 | -- | -0.684 | -- | -- | 0.00291 | -- | 0.5 | 273 | -- | -- |
| 80.7 | 0.418 | 2.91 | -- | 0.132 | -0.659 | -- | -- | 0.00615 | 4.29 | 0.4955 | 273 | -- | -- |
| 83.01 | 0.426 | 2.91 | -0.00688 | -- | -- | -- | -- | -0.00633 | -- | -- | -- | -- | -- |
| 82.08 | 0.424 | 2.91 | -- | 0.131 | -- | -- | -- | -0.00845 | 3.81 | -- | -- | -- | -- |
| 81.64 | 0.421 | 2.91 | -- | -- | -0.655 | -- | -- | 0.00855 | -- | 0.3185 | 273 | -- | -- |
| 83.02 | 0.425 | 2.91 | -- | -- | -- | -- | -- | -0.00557 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.01 | wind | 5.0 | 10 | > th | dose independent | rect. | 24 | 2 |
| 5 | 70.01 | wind | 5.0 | 10 | > th | dose dependent | rect. | 24 | 2 |
| 9 | 70.02 | wind | 5.0 | 10 | > th | dose independent | rect. | 24 | 6 |
| 18 | 70.04 | wind | 5.0 | 10 | > th | dose dependent | rect. | 24 | 6 |
| 22 | 70.05 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 23 | 1 |
| 27 | 70.05 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 23 | 1 |
| 35 | 70.12 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 40 | 70.12 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 91 | 71.91 | wind | 5.0 | 10 | > th | dose independent | rect. | 22 | 8 |
| 95 | 71.93 | wind | 1.0 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 134 | 73.07 | wind | 1.0 | 90 | < th | dose independent | rect. | 24 | 1 |
| 223 | 75.63 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 7 |
| 224 | 75.63 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 20 | 7 |
| 233 | 75.73 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 19 |
| 263 | 75.93 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 287 | 76.15 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 13 |
| 303 | 76.37 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 20 | 19 |
| 305 | 76.39 | precipitation | 0.1 | 270 | > th | dose independent | sin | 13 | NA |
| 306 | 76.39 | precipitation | 0.1 | 270 | < th | dose independent | sin | 13 | NA |
| 308 | 76.39 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 13 | NA |
| 339 | 76.61 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 20 | 13 |
| 363 | 76.79 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 15 | 13 |
| 364 | 76.79 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 10 | 18 |
| 368 | 76.82 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 15 |
| 399 | 76.92 | wind | 5.0 | 10 | < th | dose independent | sin | 9 | NA |
| 406 | 76.96 | wind | 5.0 | 10 | > th | dose independent | sin | 9 | NA |
| 413 | 76.99 | precipitation | 0.1 | 270 | < th | dose independent | sin | 17 | NA |
| 417 | 76.99 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 17 | NA |
| 440 | 77.04 | atmosphere | 1005.0 | 30 | < th | dose dependent | rect. | 1 | 1 |
| 447 | 77.06 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 20 |
| 470 | 77.13 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 12 | NA |
| 537 | 77.26 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 8 | 20 |
| 555 | 77.30 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 4 | 23 |
| 575 | 77.35 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 8 | 23 |
| 614 | 77.46 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 1 | 23 |
| 621 | 77.49 | precipitation | 0.1 | 270 | > th | dose independent | no | NA | NA |
| 622 | 77.49 | precipitation | 0.1 | 270 | < th | dose independent | no | NA | NA |
| 627 | 77.49 | precipitation | 0.1 | 270 | < th | dose dependent | no | NA | NA |
| 716 | 77.79 | wind | 3.0 | 10 | < th | dose independent | rect. | 1 | 2 |
| 720 | 77.81 | temperature | 25.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 740 | 77.93 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 1 | 2 |
| 766 | 78.15 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 10 | 18 |
| 774 | 78.21 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 13 | 15 |
| 780 | 78.24 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 13 | 20 |
| 791 | 78.26 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 18 | 12 |
| 793 | 78.27 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 15 | 13 |
| 807 | 78.29 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 846 | 78.35 | wind | 3.0 | 10 | > th | dose dependent | sin | 9 | NA |
| 848 | 78.35 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 15 | 18 |
| 868 | 78.39 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 8 | 21 |
| 879 | 78.41 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 882 | 78.42 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 8 | 23 |
| 896 | 78.45 | wind | 7.0 | 270 | > th | dose dependent | rect. | 20 | 2 |
| 919 | 78.50 | wind | 1.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 925 | 78.50 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 934 | 78.52 | precipitation | 0.1 | 270 | > th | dose dependent | no | NA | NA |
| 988 | 78.67 | humidity | 90.0 | 30 | > th | dose independent | rect. | 1 | 2 |