Os05g0418100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Seven transmembrane protein Mlo8.
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Os05g0418100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Seven transmembrane protein Mlo8.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.83 | 0.458 | 9.81 | -0.49 | 1.35 | 0.852 | -1.7 | 2.04 | -0.0751 | 14 | 19.11 | 6170 | -- | -- |
| 98.43 | 0.462 | 9.71 | -0.225 | 1.31 | 0.401 | -1.82 | -- | 0.0328 | 13.9 | 20.1 | 6985 | -- | -- |
| 105.69 | 0.479 | 9.82 | -0.45 | 1.35 | 1.01 | -- | 2.25 | -0.0614 | 13.9 | 18.96 | 7465 | -- | -- |
| 109.05 | 0.486 | 9.72 | -0.343 | 1.33 | 0.356 | -- | -- | 0.0115 | 14 | 19.9 | 6991 | -- | -- |
| 208.84 | 0.677 | 9.8 | -0.879 | -- | -0.538 | -- | 0.621 | -0.251 | -- | 18.96 | 7465 | -- | -- |
| 99.46 | 0.468 | 9.75 | -0.538 | 1.36 | -- | -1.7 | -- | -0.113 | 14 | -- | -- | -- | -- |
| 110.43 | 0.492 | 9.76 | -0.589 | 1.36 | -- | -- | -- | -0.123 | 13.9 | -- | -- | -- | -- |
| 210.2 | 0.678 | 9.79 | -0.817 | -- | -0.622 | -- | -- | -0.236 | -- | 18.96 | 7465 | -- | -- |
| 109.67 | 0.488 | 9.71 | -- | 1.35 | 0.469 | -- | -- | 0.0947 | 13.9 | 21.05 | 47520 | -- | -- |
| 221.49 | 0.695 | 9.77 | -0.646 | -- | -- | -- | -- | -0.155 | -- | -- | -- | -- | -- |
| 119.59 | 0.512 | 9.74 | -- | 1.37 | -- | -- | -- | -0.0576 | 13.9 | -- | -- | -- | -- |
| 207.06 | 0.672 | 9.79 | -- | -- | -0.505 | -- | -- | -0.229 | -- | 26.29 | 47520 | -- | -- |
| 232.48 | 0.712 | 9.76 | -- | -- | -- | -- | -- | -0.0831 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 93.19 | wind | 1.0 | 14400 | < th | dose independent | rect. | 9 | 4 |
| 2 | 93.20 | wind | 1.0 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 3 | 93.27 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 6 | 93.55 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 7 | 93.55 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 9 | 4 |
| 8 | 93.62 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 9 | 93.70 | wind | 1.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 10 | 93.70 | wind | 1.0 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 12 | 93.72 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 14 | 93.74 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 32 | 93.85 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 37 | 93.88 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 45 | 93.93 | temperature | 30.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 46 | 93.93 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 66 | 93.96 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 77 | 94.01 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 5 | 1 |
| 82 | 94.04 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 20 | 9 |
| 84 | 94.05 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 8 |
| 85 | 94.06 | temperature | 25.0 | 720 | > th | dose independent | rect. | 5 | 1 |
| 88 | 94.07 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 89 | 94.07 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 14 | 21 |
| 113 | 94.20 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 115 | 94.22 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 117 | 94.22 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 18 | 19 |
| 139 | 94.31 | wind | 3.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 140 | 94.31 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 190 | 94.40 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 2 |
| 194 | 94.41 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 200 | 94.41 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 17 |
| 202 | 94.42 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 209 | 94.43 | wind | 3.0 | 14400 | < th | dose dependent | sin | 4 | NA |
| 210 | 94.43 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 226 | 94.45 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 23 | 4 |
| 244 | 94.48 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 8 |
| 253 | 94.51 | wind | 1.0 | 10 | > th | dose independent | rect. | 5 | 15 |
| 296 | 94.59 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 298 | 94.59 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 21 | 12 |
| 309 | 94.61 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 1 | 8 |
| 312 | 94.62 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 314 | 94.62 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 5 | 15 |
| 334 | 94.65 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 344 | 94.67 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 347 | 94.67 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 13 |
| 352 | 94.68 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 379 | 94.72 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 392 | 94.73 | wind | 3.0 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 398 | 94.75 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 16 |
| 413 | 94.77 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 14 |
| 430 | 94.79 | wind | 3.0 | 14400 | < th | dose independent | rect. | 18 | 20 |
| 440 | 94.80 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 13 |
| 444 | 94.80 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 14 | 18 |
| 453 | 94.82 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 7 |
| 466 | 94.84 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 14 |
| 468 | 94.84 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 16 |
| 486 | 94.86 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 505 | 94.87 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 511 | 94.87 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 23 |
| 513 | 94.87 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 24 | 23 |
| 514 | 94.88 | wind | 3.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 544 | 94.90 | wind | 3.0 | 14400 | < th | dose dependent | no | NA | NA |
| 574 | 94.93 | humidity | 70.0 | 90 | < th | dose dependent | rect. | 19 | 1 |
| 597 | 94.94 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 8 | 23 |
| 618 | 94.95 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 11 | 23 |
| 641 | 94.97 | wind | 1.0 | 10 | < th | dose independent | rect. | 22 | 1 |
| 652 | 94.97 | wind | 3.0 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 653 | 94.97 | wind | 1.0 | 10 | < th | dose dependent | rect. | 22 | 1 |
| 662 | 94.98 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 666 | 94.98 | wind | 3.0 | 14400 | > th | dose independent | rect. | 2 | 7 |
| 667 | 94.98 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 7 |
| 669 | 94.98 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 9 |
| 675 | 94.98 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 688 | 94.99 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 15 |
| 714 | 95.00 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 15 |
| 720 | 95.01 | wind | 3.0 | 14400 | > th | dose independent | rect. | 2 | 5 |
| 734 | 95.02 | humidity | 70.0 | 90 | < th | dose independent | rect. | 19 | 1 |
| 752 | 95.02 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 16 |
| 754 | 95.03 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 772 | 95.03 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 778 | 95.04 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 20 | 9 |
| 784 | 95.04 | wind | 3.0 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 789 | 95.04 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 14 |
| 795 | 95.05 | wind | 3.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 874 | 95.09 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 878 | 95.09 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 910 | 95.10 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 911 | 95.10 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 954 | 95.12 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 15 |
| 961 | 95.12 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 963 | 95.12 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 15 |
| 966 | 95.13 | temperature | 20.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 976 | 95.13 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 15 |
| 986 | 95.14 | wind | 1.0 | 14400 | > th | dose independent | sin | 1 | NA |