Os05g0417700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0417700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 127.63 | 0.531 | 3.24 | -0.407 | 0.348 | 2.15 | 0.00351 | -6.83 | 0.49 | 8.38 | 25.88 | 19 | 2.34 | -- |
| 136.72 | 0.545 | 3.2 | 0.0346 | 0.345 | 1.74 | -0.393 | -- | 0.608 | 8.4 | 25.79 | 18 | 1.98 | -- |
| 127.61 | 0.526 | 3.24 | -0.404 | 0.345 | 2.18 | -- | -6.88 | 0.49 | 8.36 | 25.89 | 19 | 2.31 | -- |
| 136.96 | 0.545 | 3.19 | 0.0636 | 0.376 | 1.68 | -- | -- | 0.604 | 8.46 | 25.7 | 18 | 2.17 | -- |
| 132.71 | 0.537 | 3.25 | -0.407 | -- | 2.37 | -- | -6.86 | 0.486 | -- | 25.81 | 19 | 1.94 | -- |
| 169.49 | 0.61 | 3.16 | 0.211 | 0.644 | -- | -0.282 | -- | 0.7 | 9.84 | -- | -- | -- | -- |
| 169.8 | 0.61 | 3.16 | 0.201 | 0.645 | -- | -- | -- | 0.7 | 9.86 | -- | -- | -- | -- |
| 142.71 | 0.556 | 3.19 | 0.033 | -- | 1.89 | -- | -- | 0.604 | -- | 25.7 | 11 | 1.62 | -- |
| 137.04 | 0.545 | 3.19 | -- | 0.374 | 1.7 | -- | -- | 0.596 | 8.44 | 25.7 | 18 | 2.16 | -- |
| 194.68 | 0.652 | 3.18 | 0.194 | -- | -- | -- | -- | 0.7 | -- | -- | -- | -- | -- |
| 170.86 | 0.611 | 3.17 | -- | 0.644 | -- | -- | -- | 0.678 | 9.84 | -- | -- | -- | -- |
| 142.64 | 0.556 | 3.2 | -- | -- | 1.9 | -- | -- | 0.584 | -- | 25.7 | 11 | 1.69 | -- |
| 195.67 | 0.653 | 3.18 | -- | -- | -- | -- | -- | 0.679 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 117.72 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 6 | 5 |
| 6 | 118.33 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 2 | 9 |
| 18 | 122.02 | temperature | 25.0 | 270 | > th | dose independent | rect. | 6 | 3 |
| 39 | 126.16 | temperature | 25.0 | 30 | > th | dose independent | rect. | 8 | 3 |
| 62 | 129.42 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 7 | 1 |
| 99 | 134.23 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 10 |
| 110 | 135.61 | temperature | 25.0 | 10 | > th | dose dependent | sin | 7 | NA |
| 125 | 136.76 | humidity | 80.0 | 30 | < th | dose independent | rect. | 8 | 3 |
| 130 | 137.15 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 6 | 5 |
| 142 | 137.74 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 2 | 9 |
| 157 | 138.64 | humidity | 80.0 | 30 | < th | dose independent | rect. | 6 | 5 |
| 165 | 139.11 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 8 | 3 |
| 180 | 140.03 | humidity | 80.0 | 30 | < th | dose independent | rect. | 2 | 9 |
| 188 | 140.21 | radiation | 20.0 | 30 | > th | dose independent | rect. | 8 | 3 |
| 189 | 140.22 | humidity | 80.0 | 30 | < th | dose independent | rect. | 24 | 11 |
| 202 | 140.55 | humidity | 80.0 | 30 | < th | dose independent | rect. | 22 | 13 |
| 209 | 140.74 | radiation | 10.0 | 270 | > th | dose independent | rect. | 6 | 2 |
| 232 | 141.02 | radiation | 40.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 250 | 141.71 | radiation | 20.0 | 30 | > th | dose independent | rect. | 16 | 19 |
| 327 | 143.12 | humidity | 80.0 | 30 | < th | dose independent | rect. | 20 | 15 |
| 328 | 143.15 | humidity | 90.0 | 270 | < th | dose independent | rect. | 6 | 2 |
| 383 | 143.90 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 8 | 3 |
| 415 | 144.30 | radiation | 40.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 443 | 144.62 | humidity | 70.0 | 10 | < th | dose dependent | rect. | 10 | 1 |
| 471 | 145.12 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 6 | 5 |
| 473 | 145.14 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 483 | 145.45 | wind | 5.0 | 30 | < th | dose independent | rect. | 8 | 3 |
| 484 | 145.46 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 17 | 18 |
| 507 | 145.65 | humidity | 80.0 | 10 | < th | dose independent | rect. | 10 | 1 |
| 509 | 145.70 | wind | 9.0 | 30 | < th | dose dependent | rect. | 8 | 3 |
| 514 | 145.84 | temperature | 25.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 530 | 146.30 | wind | 1.0 | 10 | > th | dose independent | rect. | 8 | 3 |
| 536 | 146.36 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 6 | 5 |
| 544 | 146.55 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 8 | 3 |
| 550 | 146.67 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 8 | 3 |
| 551 | 146.68 | humidity | 60.0 | 30 | > th | dose independent | rect. | 8 | 3 |
| 556 | 146.77 | temperature | 15.0 | 10 | > th | dose independent | rect. | 11 | 23 |
| 557 | 146.78 | wind | 3.0 | 10 | < th | dose dependent | rect. | 10 | 1 |
| 558 | 146.79 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 561 | 146.79 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 564 | 146.79 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 12 | 21 |
| 576 | 147.00 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 11 | 21 |
| 577 | 147.01 | temperature | 15.0 | 30 | > th | dose independent | rect. | 11 | 21 |
| 579 | 147.02 | temperature | 10.0 | 30 | > th | dose independent | rect. | 8 | 3 |
| 582 | 147.02 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 8 | 3 |
| 585 | 147.02 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 8 | 3 |
| 588 | 147.02 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 8 | 3 |
| 592 | 147.05 | wind | 1.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 593 | 147.08 | wind | 1.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 594 | 147.08 | temperature | 10.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 596 | 147.08 | humidity | 50.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 598 | 147.08 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 599 | 147.08 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 10 | 1 |
| 601 | 147.08 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 10 | 1 |
| 604 | 147.08 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 10 | 1 |
| 617 | 147.28 | wind | 9.0 | 30 | < th | dose independent | rect. | 11 | 21 |
| 659 | 147.61 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 6 | 2 |
| 672 | 147.71 | wind | 3.0 | 10 | < th | dose independent | rect. | 10 | 1 |
| 673 | 147.76 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 11 | 21 |
| 674 | 147.76 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 11 | 21 |
| 732 | 148.24 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 18 | 14 |
| 734 | 148.29 | wind | 9.0 | 10 | < th | dose independent | rect. | 11 | 23 |
| 752 | 148.34 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 772 | 148.54 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 776 | 148.54 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 779 | 148.54 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 780 | 148.54 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 12 | 23 |
| 784 | 148.54 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 789 | 148.59 | temperature | 30.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 795 | 148.68 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 817 | 148.87 | radiation | 40.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 839 | 149.18 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 844 | 149.24 | humidity | 50.0 | 30 | > th | dose independent | rect. | 11 | 21 |
| 865 | 149.34 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 872 | 149.41 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 11 | 21 |
| 896 | 149.54 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 898 | 149.55 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 11 | 23 |
| 918 | 149.76 | radiation | 10.0 | 10 | > th | dose independent | rect. | 8 | 1 |
| 943 | 149.88 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 8 | 1 |
| 946 | 149.92 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 954 | 149.96 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 8 | 1 |
| 957 | 149.98 | wind | 1.0 | 10 | > th | dose independent | rect. | 6 | 5 |
| 972 | 150.05 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 11 | 23 |
| 975 | 150.05 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 982 | 150.12 | wind | 3.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 987 | 150.14 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 5 |
| 991 | 150.14 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 5 |