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Os05g0414700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.1 (0.0215) R2 : 0.574
β1 : 1.66 (0.0785) R2dD : 0.434 R2D : 0.295
β2 : 0.576 (0.056) R2dC : 0.0993 R2C : 0.0428
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.571 (0.0458) R2dN8 : 0.195 R2N8 : 0.0471
σ : 0.403
deviance : 74.19
__
_____
C
peak time of C : 18.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
66.97 0.384 12.2 1.47 0.564 -3.7 -0.734 8.84 0.606 17.9 0.7649 300 -- --
69.19 0.387 12.1 1.57 0.555 -1.4 -0.54 -- 0.583 17.8 1.636 171 -- --
68.23 0.385 12.2 1.48 0.561 -3.65 -- 8.93 0.599 18.1 0.774 299 -- --
68.56 0.386 12.1 1.58 0.54 -1.09 -- -- 0.596 17.9 2.159 513 -- --
84.17 0.427 12.2 1.45 -- -3.69 -- 8.49 0.584 -- 5.979 299 -- --
73.57 0.402 12.1 1.66 0.578 -- -0.52 -- 0.573 17.9 -- -- -- --
74.19 0.403 12.1 1.66 0.576 -- -- -- 0.571 18.1 -- -- -- --
84.59 0.428 12.1 1.53 -- -1.26 -- -- 0.582 -- 2.554 407 -- --
123.47 0.518 12.2 -- 0.561 -1.21 -- -- 0.496 18 2.843 2221 -- --
91.39 0.447 12.1 1.65 -- -- -- -- 0.558 -- -- -- -- --
146.99 0.567 12.2 -- 0.552 -- -- -- 0.386 18.3 -- -- -- --
138.93 0.549 12.2 -- -- -1.28 -- -- 0.481 -- 2.841 1979 -- --
162.83 0.596 12.2 -- -- -- -- -- 0.375 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 65.17 wind 9.0 14400 > th dose dependent rect. 16 4
4 65.54 precipitation 0.1 720 < th dose independent rect. 3 16
5 65.54 precipitation 0.1 720 < th dose dependent rect. 3 16
7 65.58 wind 9.0 14400 > th dose independent rect. 17 3
8 65.63 wind 9.0 14400 > th dose dependent rect. 16 9
20 65.74 wind 9.0 14400 < th dose independent rect. 17 3
22 65.77 wind 9.0 14400 > th dose dependent rect. 16 19
26 65.88 precipitation 0.1 720 < th dose independent rect. 21 23
27 65.88 precipitation 0.1 720 < th dose dependent rect. 21 23
32 65.94 wind 9.0 14400 > th dose independent rect. 17 6
40 65.98 wind 9.0 14400 < th dose independent rect. 17 6
46 65.99 temperature 20.0 90 > th dose independent rect. 22 9
57 66.03 precipitation 0.1 43200 > th dose dependent rect. 16 2
65 66.11 wind 9.0 14400 > th dose independent rect. 16 19
78 66.21 wind 9.0 14400 < th dose independent rect. 17 18
91 66.35 wind 1.0 14400 > th dose independent rect. 24 3
93 66.36 wind 7.0 14400 < th dose independent rect. 19 3
96 66.42 wind 7.0 14400 > th dose independent rect. 19 2
98 66.43 wind 5.0 14400 > th dose dependent rect. 19 2
111 66.50 wind 5.0 90 < th dose independent rect. 16 19
113 66.50 humidity 50.0 720 > th dose dependent rect. 19 2
125 66.55 precipitation 0.1 720 < th dose independent rect. 13 15
127 66.55 precipitation 0.1 720 < th dose dependent rect. 13 15
177 66.73 temperature 20.0 10 > th dose independent rect. 20 11
178 66.73 precipitation 0.1 720 < th dose independent rect. 16 17
181 66.73 precipitation 0.1 720 < th dose dependent rect. 16 17
182 66.74 wind 1.0 14400 < th dose independent rect. 24 3
239 66.86 wind 9.0 14400 > th dose dependent sin 12 NA
254 66.88 temperature 20.0 10 > th dose independent rect. 22 9
259 66.89 precipitation 0.1 4320 < th dose independent rect. 12 6
269 66.89 precipitation 0.1 4320 < th dose dependent rect. 12 6
293 66.93 precipitation 0.1 4320 > th dose dependent rect. 13 5
296 66.94 humidity 70.0 1440 < th dose dependent rect. 15 1
325 66.99 precipitation 0.1 4320 > th dose independent rect. 12 6
378 67.06 precipitation 0.1 4320 < th dose independent rect. 9 9
382 67.06 precipitation 0.1 4320 < th dose dependent rect. 9 9
384 67.07 wind 5.0 14400 > th dose independent rect. 6 4
385 67.07 wind 5.0 14400 < th dose independent rect. 6 4
403 67.09 precipitation 0.1 270 > th dose independent rect. 2 17
424 67.12 radiation 20.0 1440 < th dose independent rect. 12 1
425 67.12 wind 1.0 14400 < th dose independent rect. 24 6
428 67.12 precipitation 0.1 270 > th dose independent rect. 2 22
436 67.13 precipitation 0.1 720 < th dose independent rect. 16 9
439 67.13 precipitation 0.1 720 < th dose dependent rect. 16 9
445 67.14 precipitation 0.1 270 > th dose independent rect. 2 19
447 67.15 wind 1.0 14400 < th dose independent rect. 5 1
448 67.15 radiation 20.0 1440 < th dose independent rect. 11 3
454 67.16 temperature 20.0 10 > th dose independent rect. 20 8
467 67.18 precipitation 0.1 14400 > th dose dependent rect. 6 12
473 67.19 precipitation 0.1 4320 > th dose independent rect. 9 9
475 67.19 precipitation 0.1 4320 > th dose dependent rect. 9 9
489 67.22 precipitation 0.1 270 > th dose independent rect. 8 21
490 67.22 precipitation 0.1 270 > th dose independent rect. 19 23
492 67.22 humidity 90.0 720 > th dose dependent rect. 16 3
501 67.23 precipitation 0.1 720 > th dose independent rect. 17 11
517 67.25 humidity 70.0 720 > th dose independent rect. 17 14
562 67.29 wind 9.0 14400 > th dose independent sin 12 NA
563 67.29 humidity 90.0 720 > th dose independent rect. 16 2
567 67.29 precipitation 0.1 270 > th dose independent rect. 16 22
580 67.31 precipitation 0.1 270 > th dose independent rect. 22 21
581 67.31 wind 7.0 270 < th dose independent rect. 13 22
582 67.31 precipitation 0.1 270 > th dose independent rect. 8 23
622 67.34 precipitation 0.1 270 > th dose independent rect. 6 23
628 67.35 precipitation 0.1 14400 < th dose independent rect. 17 2
631 67.35 precipitation 0.1 720 < th dose independent rect. 23 20
634 67.35 precipitation 0.1 14400 < th dose dependent rect. 17 2
639 67.35 precipitation 0.1 720 < th dose dependent rect. 23 20
640 67.36 precipitation 0.1 14400 > th dose independent rect. 17 2
646 67.36 temperature 20.0 10 > th dose independent rect. 12 16
647 67.36 wind 5.0 14400 > th dose independent rect. 17 17
649 67.36 wind 1.0 43200 < th dose dependent rect. 12 1
652 67.37 humidity 80.0 720 > th dose independent rect. 20 1
659 67.37 precipitation 0.1 270 > th dose independent rect. 13 21
664 67.37 precipitation 0.1 720 > th dose dependent rect. 16 15
669 67.38 wind 5.0 14400 < th dose independent rect. 17 17
688 67.39 precipitation 0.1 270 > th dose independent rect. 16 18
704 67.40 wind 7.0 720 < th dose independent rect. 21 22
705 67.40 precipitation 0.1 720 < th dose independent rect. 13 22
708 67.40 precipitation 0.1 720 < th dose dependent rect. 13 22
709 67.41 wind 7.0 43200 > th dose independent sin 15 NA
713 67.41 temperature 20.0 10 > th dose independent rect. 22 6
723 67.42 wind 7.0 43200 < th dose independent sin 15 NA
729 67.43 precipitation 0.1 270 > th dose independent no NA NA
730 67.43 precipitation 0.1 270 < th dose independent no NA NA
743 67.43 precipitation 0.1 270 < th dose dependent no NA NA
746 67.43 wind 1.0 14400 < th dose dependent rect. 24 5
794 67.46 precipitation 0.1 720 > th dose dependent rect. 16 22
795 67.46 precipitation 0.1 720 > th dose dependent rect. 21 22
797 67.47 precipitation 0.1 270 < th dose independent sin 1 NA
804 67.47 precipitation 0.1 270 < th dose dependent sin 1 NA
852 67.51 humidity 70.0 720 > th dose independent rect. 17 6
869 67.52 humidity 60.0 1440 > th dose independent rect. 15 1
878 67.52 precipitation 0.1 720 < th dose independent rect. 6 23
883 67.52 precipitation 0.1 720 < th dose dependent rect. 6 23
903 67.54 wind 9.0 14400 < th dose independent sin 12 NA
945 67.56 precipitation 0.1 270 > th dose dependent rect. 2 18