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Os05g0412900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.16 (0.0602) R2 : 0.395
β1 : 2.47 (0.303) R2dD : 0.253 R2D : -0.0291
β2 : 0.542 (0.119) R2dC : 0.0276 R2C : 0.0202
β3 : 1.69 (0.213) R2dE : 0.155 R2E : -0.0851
β4 : -3.99 (0.456) R2dD*C : 0.103 R2D*C : 0.101
β5 : 7.22 (0.806) R2dD*E : 0.378 R2D*E : -0.273
γ1 : -0.678 (0.134) R2dN8 : 0.0721 R2N8 : 0.0623
σ : 0.94
deviance : 400.68
__
_____
C
peak time of C : 11
E
wheather : radiation
threshold : 0.93
memory length : 17258
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
400.68 0.94 6.16 2.47 0.542 1.69 -3.99 7.22 -0.678 11 0.93 17258 -- --
442.41 0.98 6.31 1.98 0.412 1.75 -4.28 -- -0.746 10.8 9.4 14460 -- --
444.93 0.982 6.21 2.2 0.804 2.04 -- 7.62 -0.798 10.5 0.996 21277 -- --
496.05 1.04 6.47 1.46 0.342 1.67 -- -- -1.26 10.1 22.17 25939 -- --
471.57 1.01 6.17 2.12 -- 2.13 -- 7.98 -0.747 -- 0.98 27205 -- --
493.09 1.04 6.36 1.03 0.442 -- -4.23 -- -0.757 11.1 -- -- -- --
561.72 1.11 6.36 0.843 0.609 -- -- -- -0.782 8.56 -- -- -- --
509.35 1.05 6.5 1.27 -- 1.59 -- -- -1.19 -- 21.88 26125 -- --
467.06 1.01 6.45 -- 0.621 2.19 -- -- -1.63 9.25 10 25459 -- --
582.58 1.13 6.38 0.845 -- -- -- -- -0.776 -- -- -- -- --
580.45 1.13 6.38 -- 0.613 -- -- -- -0.876 8.45 -- -- -- --
485.56 1.03 6.5 -- -- 1.99 -- -- -1.64 -- 10.01 26043 -- --
601.42 1.14 6.4 -- -- -- -- -- -0.87 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 371.16 humidity 90.0 14400 > th dose independent rect. 24 3
2 371.57 wind 1.0 14400 < th dose dependent rect. 22 2
3 371.93 humidity 90.0 14400 > th dose independent rect. 1 1
5 372.95 humidity 80.0 14400 > th dose dependent rect. 1 2
6 373.25 humidity 50.0 14400 > th dose dependent rect. 1 2
15 374.52 humidity 90.0 14400 > th dose independent rect. 23 7
20 375.17 wind 1.0 43200 < th dose independent rect. 10 4
21 375.24 humidity 90.0 14400 < th dose independent rect. 23 7
22 375.41 precipitation 0.1 43200 > th dose dependent rect. 1 2
28 375.90 humidity 80.0 14400 > th dose dependent rect. 24 6
31 376.36 wind 1.0 43200 > th dose independent rect. 10 4
41 377.15 precipitation 0.1 43200 > th dose independent rect. 2 1
43 377.44 precipitation 0.1 43200 < th dose independent rect. 2 1
45 377.44 precipitation 0.1 43200 < th dose dependent rect. 2 1
56 378.25 precipitation 0.1 43200 < th dose independent rect. 4 1
57 378.25 precipitation 0.1 43200 < th dose dependent rect. 4 1
58 378.40 wind 1.0 14400 > th dose independent rect. 11 2
60 378.47 precipitation 0.1 43200 > th dose dependent rect. 23 4
67 378.82 precipitation 0.1 43200 < th dose independent rect. 24 5
68 378.82 precipitation 0.1 43200 < th dose dependent rect. 24 5
74 379.08 wind 1.0 14400 > th dose independent rect. 22 3
77 379.17 precipitation 0.1 43200 > th dose independent rect. 24 5
78 379.36 precipitation 0.1 43200 > th dose independent rect. 4 1
80 379.40 wind 1.0 14400 < th dose independent rect. 11 2
83 379.61 radiation 10.0 14400 < th dose dependent rect. 10 1
84 379.63 wind 1.0 14400 < th dose independent rect. 22 3
99 380.41 precipitation 0.1 43200 > th dose dependent rect. 4 1
105 380.55 humidity 80.0 43200 < th dose independent rect. 17 1
117 380.88 humidity 90.0 14400 < th dose independent rect. 24 1
128 381.45 precipitation 0.1 43200 < th dose independent rect. 2 9
129 381.45 precipitation 0.1 43200 < th dose dependent rect. 2 9
130 381.49 precipitation 0.1 43200 > th dose independent rect. 2 9
145 382.20 humidity 80.0 43200 > th dose independent rect. 17 1
148 382.25 temperature 25.0 43200 > th dose independent rect. 21 1
150 382.28 precipitation 0.1 43200 < th dose independent rect. 22 7
152 382.28 precipitation 0.1 43200 < th dose dependent rect. 22 7
154 382.29 temperature 25.0 43200 < th dose independent rect. 21 1
157 382.32 precipitation 0.1 43200 > th dose dependent rect. 2 10
171 382.62 precipitation 0.1 43200 > th dose independent rect. 22 7
180 382.74 precipitation 0.1 43200 > th dose dependent rect. 22 7
197 383.12 precipitation 0.1 43200 < th dose independent rect. 23 13
198 383.12 precipitation 0.1 43200 < th dose dependent rect. 23 13
370 385.15 temperature 25.0 43200 > th dose dependent rect. 20 1
411 385.72 precipitation 0.1 43200 < th dose independent sin 6 NA
413 385.72 precipitation 0.1 43200 < th dose dependent sin 6 NA
437 385.94 precipitation 0.1 43200 > th dose independent sin 6 NA
453 386.16 wind 1.0 14400 < th dose independent rect. 22 1
465 386.33 wind 9.0 43200 > th dose dependent rect. 15 2
475 386.41 wind 1.0 43200 < th dose independent rect. 10 14
479 386.44 wind 1.0 43200 > th dose independent rect. 10 14
546 387.10 precipitation 0.1 43200 > th dose dependent sin 5 NA
548 387.13 wind 1.0 14400 < th dose dependent rect. 19 6
695 388.70 humidity 90.0 14400 > th dose independent rect. 5 1
721 388.98 wind 1.0 43200 < th dose dependent rect. 2 3
723 389.00 wind 1.0 43200 < th dose dependent rect. 4 1
772 389.42 temperature 30.0 43200 < th dose independent rect. 18 14
781 389.50 radiation 10.0 14400 > th dose independent rect. 10 1
805 389.73 temperature 30.0 43200 < th dose independent rect. 14 1
839 390.05 temperature 30.0 43200 > th dose independent rect. 14 1
862 390.31 humidity 90.0 14400 < th dose dependent rect. 23 3
876 390.44 wind 1.0 43200 < th dose dependent rect. 10 4
902 390.63 radiation 1.0 43200 > th dose independent rect. 7 1
913 390.69 temperature 30.0 43200 < th dose dependent rect. 21 1
925 390.78 temperature 25.0 43200 > th dose dependent sin 12 NA
936 390.91 humidity 90.0 14400 < th dose dependent rect. 22 5
947 390.99 radiation 1.0 43200 < th dose independent rect. 7 1
957 391.07 temperature 25.0 43200 > th dose independent sin 13 NA
968 391.13 temperature 25.0 43200 < th dose independent sin 13 NA
979 391.17 wind 1.0 14400 < th dose independent rect. 19 7
995 391.26 radiation 10.0 14400 < th dose independent rect. 10 1