Os05g0412500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0412500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.64 | 0.292 | 8.56 | 1.47 | 0.777 | -1.07 | 0.0131 | -0.0283 | 0.128 | 6.31 | 26.34 | 1763 | -- | -- |
| 38.64 | 0.29 | 8.56 | 1.47 | 0.779 | -1.06 | 0.0098 | -- | 0.128 | 6.31 | 26.38 | 1770 | -- | -- |
| 38.64 | 0.29 | 8.56 | 1.47 | 0.779 | -1.06 | -- | -0.0287 | 0.128 | 6.31 | 26.34 | 1770 | -- | -- |
| 38.63 | 0.289 | 8.56 | 1.47 | 0.791 | -1.04 | -- | -- | 0.129 | 6.37 | 26.5 | 1844 | -- | -- |
| 65.1 | 0.376 | 8.57 | 1.44 | -- | -1.12 | -- | -0.374 | 0.122 | -- | 25.6 | 2812 | -- | -- |
| 55.71 | 0.35 | 8.5 | 1.82 | 0.751 | -- | -0.0166 | -- | 0.374 | 6.26 | -- | -- | -- | -- |
| 55.71 | 0.35 | 8.5 | 1.82 | 0.751 | -- | -- | -- | 0.374 | 6.26 | -- | -- | -- | -- |
| 65.26 | 0.376 | 8.58 | 1.39 | -- | -1.06 | -- | -- | 0.116 | -- | 26.2 | 2810 | -- | -- |
| 45.99 | 0.316 | 8.63 | -- | 0.732 | -1.64 | -- | -- | -0.214 | 6.5 | 22.12 | 46602 | -- | -- |
| 84.94 | 0.431 | 8.52 | 1.84 | -- | -- | -- | -- | 0.39 | -- | -- | -- | -- | -- |
| 142.96 | 0.559 | 8.55 | -- | 0.776 | -- | -- | -- | 0.171 | 6.13 | -- | -- | -- | -- |
| 74.98 | 0.403 | 8.65 | -- | -- | -1.65 | -- | -- | -0.208 | -- | 22.02 | 47520 | -- | -- |
| 174.23 | 0.616 | 8.56 | -- | -- | -- | -- | -- | 0.186 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.12 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 20 |
| 5 | 38.62 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 17 |
| 6 | 38.63 | temperature | 10 | 270 | > th | dose dependent | rect. | 2 | 21 |
| 8 | 38.73 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 22 |
| 10 | 38.77 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 20 |
| 13 | 38.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 25 | 38.85 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 21 |
| 36 | 38.87 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 21 |
| 56 | 38.91 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 59 | 38.91 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 18 |
| 64 | 38.92 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 16 |
| 153 | 39.05 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 19 |
| 188 | 39.12 | temperature | 25 | 1440 | < th | dose dependent | sin | 4 | NA |
| 192 | 39.13 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 194 | 39.13 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 3 |
| 212 | 39.16 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 3 |
| 226 | 39.18 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 246 | 39.21 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 288 | 39.26 | temperature | 30 | 90 | < th | dose dependent | rect. | 14 | 14 |
| 429 | 39.41 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 16 |
| 457 | 39.43 | temperature | 15 | 10 | > th | dose dependent | rect. | 4 | 22 |
| 608 | 39.56 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 16 |
| 625 | 39.57 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 22 |
| 665 | 39.62 | temperature | 10 | 1440 | > th | dose dependent | sin | 13 | NA |
| 812 | 39.72 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 21 |
| 869 | 39.76 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 958 | 39.81 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 3 |
| 978 | 39.82 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |