Os05g0410200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Esterase/lipase/thioesterase domain containing protein.
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Os05g0410200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Esterase/lipase/thioesterase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 201.99 | 0.668 | 12.4 | -0.693 | 3.65 | 0.872 | 0.855 | -0.296 | -0.462 | 9.48 | 69.98 | 1307 | -- | -- |
| 201.61 | 0.661 | 12.4 | -0.624 | 3.66 | 0.889 | 0.862 | -- | -0.494 | 9.49 | 72.3 | 1301 | -- | -- |
| 204.63 | 0.666 | 12.4 | -0.669 | 3.66 | 0.869 | -- | -0.396 | -0.453 | 9.49 | 70 | 1290 | -- | -- |
| 204.33 | 0.666 | 12.4 | -0.599 | 3.65 | 0.876 | -- | -- | -0.496 | 9.48 | 72.94 | 1301 | -- | -- |
| 900.21 | 1.41 | 12.5 | -0.526 | -- | 0.981 | -- | -0.522 | -0.339 | -- | 70 | 1290 | -- | -- |
| 229.58 | 0.71 | 12.4 | -0.456 | 3.59 | -- | 0.736 | -- | -0.379 | 9.34 | -- | -- | -- | -- |
| 231.54 | 0.713 | 12.4 | -0.43 | 3.59 | -- | -- | -- | -0.378 | 9.34 | -- | -- | -- | -- |
| 901.57 | 1.4 | 12.5 | -0.516 | -- | 0.975 | -- | -- | -0.337 | -- | 70 | 1290 | -- | -- |
| 213.36 | 0.68 | 12.4 | -- | 3.64 | 0.805 | -- | -- | -0.425 | 9.48 | 73.71 | 1308 | -- | -- |
| 984.56 | 1.47 | 12.5 | -0.448 | -- | -- | -- | -- | -0.364 | -- | -- | -- | -- | -- |
| 236.41 | 0.719 | 12.4 | -- | 3.59 | -- | -- | -- | -0.33 | 9.35 | -- | -- | -- | -- |
| 899.47 | 1.4 | 12.5 | -- | -- | 0.944 | -- | -- | -0.315 | -- | 73.71 | 1308 | -- | -- |
| 989.85 | 1.47 | 12.5 | -- | -- | -- | -- | -- | -0.314 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 198.22 | radiation | 20 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 2 | 199.30 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 3 | 199.31 | radiation | 20 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 18 | 200.21 | radiation | 20 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 33 | 200.77 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 34 | 201.00 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 37 | 202.03 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 38 | 202.07 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 22 |
| 39 | 202.07 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 41 | 202.30 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 20 |
| 42 | 202.34 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 47 | 202.46 | humidity | 80 | 1440 | < th | dose dependent | rect. | 7 | 7 |
| 52 | 202.53 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 20 |
| 54 | 202.55 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 22 |
| 61 | 202.74 | radiation | 30 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 64 | 202.78 | humidity | 80 | 1440 | < th | dose dependent | sin | 2 | NA |
| 93 | 203.17 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 21 |
| 118 | 203.26 | humidity | 80 | 1440 | < th | dose dependent | rect. | 7 | 12 |
| 163 | 203.42 | radiation | 30 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 198 | 203.52 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 219 | 203.58 | humidity | 70 | 1440 | < th | dose independent | no | NA | NA |
| 220 | 203.58 | humidity | 70 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 308 | 203.64 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 335 | 203.67 | radiation | 30 | 4320 | < th | dose independent | rect. | 17 | 15 |
| 336 | 203.67 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 368 | 203.75 | radiation | 30 | 4320 | < th | dose independent | rect. | 19 | 13 |
| 384 | 203.76 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 400 | 203.80 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 411 | 203.84 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 18 |
| 417 | 203.85 | humidity | 70 | 1440 | > th | dose independent | rect. | 4 | 16 |
| 427 | 203.86 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 14 |
| 441 | 203.87 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 452 | 203.87 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 483 | 203.90 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 5 |
| 493 | 203.91 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 505 | 203.94 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 7 |
| 510 | 203.98 | humidity | 70 | 1440 | < th | dose independent | rect. | 19 | 23 |
| 565 | 204.20 | humidity | 50 | 1440 | > th | dose dependent | rect. | 8 | 7 |
| 567 | 204.21 | humidity | 70 | 1440 | < th | dose independent | sin | 22 | NA |
| 662 | 204.52 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 9 |
| 666 | 204.53 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 12 |
| 675 | 204.56 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 685 | 204.60 | humidity | 70 | 1440 | > th | dose independent | sin | 22 | NA |
| 695 | 204.65 | humidity | 70 | 1440 | > th | dose independent | sin | 10 | NA |
| 711 | 204.70 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 22 |
| 731 | 204.76 | humidity | 70 | 1440 | < th | dose independent | sin | 10 | NA |
| 795 | 204.87 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 17 | 22 |
| 841 | 204.94 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 18 | 21 |
| 938 | 205.01 | radiation | 10 | 1440 | > th | dose independent | rect. | 17 | 20 |
| 969 | 205.08 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 13 | 12 |
| 990 | 205.16 | atmosphere | 995 | 43200 | < th | dose dependent | sin | 16 | NA |