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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0409400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : MAP65/ASE1 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.29 (0.043) R2 : 1.34e-05
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.00709 (0.0905) R2dN8 : 1.74e-05 R2N8 : 1.34e-05
σ : 0.81
deviance : 300.86
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
282.82 0.79 3.22 0.251 0.358 0.46 -0.232 -2.81 0.114 10.7 7.988 1363 -- --
283.44 0.784 3.26 0.287 0.375 1.03 -0.208 -- 0.0903 10.7 7.904 1346 -- --
283.04 0.784 3.23 0.244 0.36 0.473 -- -2.7 0.112 10.7 8 1363 -- --
283.55 0.784 3.25 0.305 0.364 1.05 -- -- 0.106 10.7 7.906 1346 -- --
290.97 0.794 3.23 0.222 -- 0.354 -- -3.06 0.114 -- 7.952 1363 -- --
293.35 0.803 3.27 0.109 0.341 -- -0.13 -- 0.0198 10.6 -- -- -- --
293.41 0.802 3.27 0.104 0.342 -- -- -- 0.0195 10.6 -- -- -- --
291.55 0.795 3.27 0.279 -- 0.993 -- -- 0.0981 -- 8.2 1363 -- --
285.62 0.787 3.26 -- 0.358 0.892 -- -- 0.0582 10.6 8.178 1362 -- --
300.61 0.81 3.28 0.0973 -- -- -- -- 0.0179 -- -- -- -- --
293.7 0.802 3.28 -- 0.341 -- -- -- 0.00801 10.6 -- -- -- --
285.18 0.787 3.26 -- -- 0.927 -- -- 0.075 -- 10.8 1306 -- --
300.86 0.81 3.29 -- -- -- -- -- 0.00709 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 272.62 radiation 1 90 < th dose independent rect. 8 3
2 272.62 radiation 1 90 < th dose dependent rect. 8 3
5 276.00 wind 3 720 < th dose independent rect. 22 5
7 276.36 wind 7 1440 < th dose independent rect. 13 1
9 276.60 wind 7 1440 > th dose independent rect. 13 1
10 276.76 wind 3 720 < th dose independent rect. 24 2
12 276.88 wind 5 1440 > th dose dependent rect. 13 1
17 277.07 wind 9 1440 < th dose independent rect. 15 2
21 277.50 wind 3 720 > th dose independent rect. 21 6
24 277.70 wind 9 1440 > th dose dependent rect. 15 1
25 277.74 wind 5 720 < th dose dependent rect. 21 6
28 277.90 wind 3 720 > th dose independent rect. 1 1
34 278.02 wind 9 1440 > th dose independent rect. 15 1
35 278.05 radiation 1 90 > th dose independent rect. 4 1
45 278.05 radiation 1 90 > th dose dependent rect. 4 1
69 278.48 wind 7 1440 > th dose independent rect. 12 6
88 278.84 humidity 80 720 < th dose independent rect. 22 1
102 279.08 wind 9 1440 < th dose dependent rect. 13 1
103 279.10 humidity 80 720 < th dose independent rect. 22 3
108 279.14 wind 7 1440 > th dose dependent rect. 12 7
113 279.22 wind 7 1440 > th dose dependent rect. 12 5
123 279.36 humidity 80 720 < th dose dependent rect. 22 1
149 279.55 wind 3 720 > th dose dependent rect. 23 2
153 279.59 wind 7 1440 > th dose independent rect. 17 1
161 279.70 radiation 1 10 < th dose dependent rect. 6 1
184 279.87 humidity 80 720 < th dose dependent rect. 22 3
186 279.88 radiation 20 14400 > th dose dependent rect. 16 1
234 280.19 wind 7 1440 > th dose dependent rect. 17 1
248 280.26 wind 3 720 > th dose dependent rect. 21 6
275 280.41 wind 7 1440 < th dose independent rect. 12 18
349 280.80 wind 1 720 > th dose dependent rect. 19 10
363 280.86 wind 9 1440 < th dose independent rect. 17 4
368 280.87 wind 5 720 < th dose dependent rect. 24 1
424 281.08 wind 7 90 > th dose independent rect. 4 6
430 281.09 wind 1 10 < th dose dependent rect. 6 1
474 281.21 radiation 20 14400 < th dose independent rect. 17 10
524 281.42 wind 7 1440 > th dose independent sin 18 NA
534 281.43 wind 7 90 > th dose dependent rect. 4 6
535 281.44 wind 3 720 > th dose independent sin 12 NA
542 281.46 wind 7 1440 < th dose independent sin 18 NA
564 281.52 wind 3 720 < th dose independent sin 12 NA
576 281.55 wind 7 90 > th dose dependent rect. 7 3
583 281.57 wind 7 90 > th dose independent rect. 7 3
602 281.61 radiation 20 14400 < th dose independent rect. 17 8
642 281.71 wind 9 1440 < th dose independent rect. 15 15
661 281.77 wind 7 1440 > th dose dependent sin 18 NA
685 281.81 wind 9 1440 < th dose independent rect. 15 18
690 281.82 radiation 30 14400 < th dose independent rect. 16 4
696 281.83 humidity 90 14400 < th dose dependent rect. 22 1
723 281.88 wind 9 1440 < th dose dependent rect. 12 15
726 281.90 radiation 40 14400 < th dose independent rect. 15 1
737 281.94 radiation 1 720 > th dose independent rect. 4 1
756 281.94 radiation 1 720 > th dose dependent rect. 4 1
797 282.01 wind 1 1440 > th dose dependent rect. 12 15
824 282.07 wind 1 10 < th dose dependent rect. 6 3
831 282.09 humidity 70 14400 < th dose independent rect. 16 2
894 282.20 radiation 40 14400 < th dose dependent rect. 18 3
902 282.21 humidity 70 14400 < th dose dependent rect. 15 1
910 282.22 radiation 40 14400 < th dose dependent rect. 18 10
961 282.31 radiation 1 10 < th dose independent rect. 13 3
983 282.33 wind 5 4320 < th dose dependent rect. 19 1