Os05g0409100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0409100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 163.81 | 0.601 | 7.24 | 2.03 | 0.729 | 3.75 | -0.162 | 1.71 | -0.0988 | 23.6 | 26.3 | 726 | -- | -- |
| 166.82 | 0.602 | 7.2 | 2.34 | 0.732 | 3.63 | -0.475 | -- | -0.0287 | 23.4 | 26.83 | 725 | -- | -- |
| 163.9 | 0.596 | 7.24 | 2.02 | 0.734 | 3.75 | -- | 1.79 | -0.101 | 23.6 | 26.36 | 726 | -- | -- |
| 167.81 | 0.603 | 7.2 | 2.37 | 0.755 | 3.66 | -- | -- | -0.0232 | 23.4 | 26.92 | 733 | -- | -- |
| 171.33 | 0.61 | 7.22 | 2.19 | -- | 3.67 | -- | 1.67 | -0.0722 | -- | 26.36 | 1800 | -- | -- |
| 362.94 | 0.893 | 7.36 | 1.33 | 0.356 | -- | 0.695 | -- | -0.834 | 4.89 | -- | -- | -- | -- |
| 363.81 | 0.893 | 7.36 | 1.33 | 0.364 | -- | -- | -- | -0.838 | 4.07 | -- | -- | -- | -- |
| 173.98 | 0.614 | 7.18 | 2.53 | -- | 3.54 | -- | -- | 0.00882 | -- | 27.15 | 1786 | -- | -- |
| 294.9 | 0.8 | 7.32 | -- | 0.462 | 2.85 | -- | -- | -0.593 | 21.6 | 32.23 | 573 | -- | -- |
| 371.04 | 0.9 | 7.36 | 1.34 | -- | -- | -- | -- | -0.828 | -- | -- | -- | -- | -- |
| 410.33 | 0.948 | 7.39 | -- | 0.39 | -- | -- | -- | -0.986 | 4.02 | -- | -- | -- | -- |
| 303.33 | 0.811 | 7.3 | -- | -- | 2.54 | -- | -- | -0.595 | -- | 31.28 | 368 | -- | -- |
| 418.64 | 0.955 | 7.4 | -- | -- | -- | -- | -- | -0.977 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 155.83 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 2 | 155.86 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 5 | 156.12 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 12 | 157.00 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 19 |
| 46 | 158.28 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 15 |
| 92 | 159.58 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 14 |
| 102 | 159.77 | temperature | 30 | 1440 | < th | dose dependent | sin | 13 | NA |
| 158 | 160.67 | temperature | 10 | 1440 | > th | dose dependent | sin | 12 | NA |
| 617 | 164.49 | temperature | 15 | 720 | > th | dose dependent | rect. | 13 | 20 |