Os05g0405600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os05g0405600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 302.27 | 0.817 | 3.76 | 1.57 | 0.997 | -1.82 | 0.0931 | 1.69 | 0.626 | 22.6 | 26 | 1032 | -- | -- |
| 304.75 | 0.813 | 3.81 | 1.18 | 1.03 | -1.67 | 0.376 | -- | 0.494 | 22.3 | 26.09 | 990 | -- | -- |
| 302.14 | 0.81 | 3.75 | 1.64 | 0.953 | -1.85 | -- | 1.93 | 0.653 | 22.8 | 26.07 | 1070 | -- | -- |
| 305.01 | 0.813 | 3.82 | 1.16 | 0.959 | -1.7 | -- | -- | 0.476 | 22.6 | 26.3 | 1037 | -- | -- |
| 328.69 | 0.844 | 3.73 | 1.67 | -- | -1.55 | -- | 1.83 | 0.645 | -- | 25.7 | 1401 | -- | -- |
| 378.41 | 0.912 | 3.91 | 0.622 | 0.495 | -- | 0.0602 | -- | -0.0146 | 21.8 | -- | -- | -- | -- |
| 378.43 | 0.911 | 3.91 | 0.62 | 0.495 | -- | -- | -- | -0.0147 | 21.8 | -- | -- | -- | -- |
| 330.71 | 0.847 | 3.79 | 1.1 | -- | -1.41 | -- | -- | 0.488 | -- | 25.7 | 1419 | -- | -- |
| 335.11 | 0.853 | 3.85 | -- | 0.975 | -1.32 | -- | -- | 0.325 | 22.3 | 25.7 | 931 | -- | -- |
| 393.04 | 0.926 | 3.9 | 0.625 | -- | -- | -- | -- | -0.0151 | -- | -- | -- | -- | -- |
| 388.55 | 0.922 | 3.93 | -- | 0.497 | -- | -- | -- | -0.0837 | 21.9 | -- | -- | -- | -- |
| 359.6 | 0.883 | 3.83 | -- | -- | -1.13 | -- | -- | 0.276 | -- | 25.6 | 1419 | -- | -- |
| 403.33 | 0.937 | 3.92 | -- | -- | -- | -- | -- | -0.0844 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 306.90 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 2 | 307.32 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 4 |
| 4 | 307.76 | temperature | 25 | 720 | < th | dose independent | rect. | 19 | 3 |
| 5 | 308.26 | temperature | 25 | 720 | > th | dose independent | rect. | 14 | 10 |
| 8 | 309.41 | temperature | 25 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 10 | 309.63 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 6 |
| 11 | 309.71 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 5 |
| 17 | 309.91 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 21 | 310.04 | temperature | 20 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 29 | 310.17 | temperature | 25 | 720 | > th | dose independent | sin | 17 | NA |
| 38 | 310.41 | temperature | 20 | 720 | > th | dose dependent | rect. | 14 | 12 |
| 87 | 311.15 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 11 |
| 91 | 311.21 | temperature | 25 | 4320 | > th | dose dependent | rect. | 13 | 4 |
| 96 | 311.27 | temperature | 25 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 100 | 311.31 | temperature | 30 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 121 | 311.42 | temperature | 30 | 14400 | < th | dose dependent | rect. | 19 | 3 |
| 133 | 311.52 | temperature | 30 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 141 | 311.56 | temperature | 25 | 720 | > th | dose independent | rect. | 14 | 19 |
| 170 | 311.72 | temperature | 20 | 1440 | > th | dose dependent | rect. | 10 | 5 |
| 204 | 311.91 | temperature | 25 | 720 | < th | dose independent | rect. | 10 | 14 |
| 221 | 311.99 | temperature | 20 | 720 | > th | dose dependent | sin | 15 | NA |
| 253 | 312.10 | temperature | 25 | 4320 | > th | dose dependent | rect. | 11 | 8 |
| 261 | 312.12 | temperature | 25 | 720 | < th | dose independent | sin | 17 | NA |
| 268 | 312.14 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 287 | 312.24 | temperature | 25 | 720 | > th | dose independent | rect. | 8 | 18 |
| 311 | 312.30 | temperature | 20 | 14400 | > th | dose dependent | sin | 14 | NA |
| 398 | 312.56 | temperature | 25 | 14400 | < th | dose independent | sin | 15 | NA |
| 402 | 312.56 | temperature | 25 | 4320 | > th | dose dependent | sin | 22 | NA |
| 474 | 312.72 | temperature | 25 | 14400 | > th | dose independent | sin | 16 | NA |
| 544 | 312.86 | temperature | 25 | 1440 | > th | dose dependent | rect. | 23 | 17 |
| 736 | 313.22 | temperature | 30 | 720 | < th | dose dependent | sin | 17 | NA |
| 756 | 313.25 | temperature | 25 | 720 | > th | dose dependent | sin | 12 | NA |
| 822 | 313.33 | temperature | 25 | 14400 | < th | dose independent | rect. | 14 | 18 |
| 907 | 313.44 | temperature | 25 | 14400 | > th | dose independent | rect. | 14 | 18 |
| 955 | 313.50 | temperature | 20 | 14400 | > th | dose dependent | no | NA | NA |
| 966 | 313.50 | temperature | 20 | 14400 | > th | dose dependent | rect. | 1 | 23 |