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Os05g0404200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Mss4-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.3 (0.0147) R2 : 0.14
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.267 (0.0309) R2dN8 : 0.181 R2N8 : 0.14
σ : 0.276
deviance : 35.09
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
18.08 0.2 13.3 -0.349 0.564 -0.589 -0.0665 0.7 -0.364 4.68 93.96 170 -- --
18.35 0.2 13.3 -0.343 0.579 -0.575 0.13 -- -0.363 4.75 93.85 172 -- --
18.09 0.198 13.3 -0.348 0.565 -0.593 -- 0.642 -0.364 4.71 93.96 170 -- --
18.39 0.2 13.3 -0.346 0.573 -0.573 -- -- -0.363 4.72 93.89 175 -- --
30.94 0.26 13.3 -0.366 -- 0.098 -- 0.731 -0.299 -- 93.96 170 -- --
21.18 0.216 13.3 -0.373 0.445 -- -0.0513 -- -0.318 4.56 -- -- -- --
21.19 0.216 13.3 -0.373 0.445 -- -- -- -0.318 4.59 -- -- -- --
26.55 0.24 13.3 -0.375 -- 0.354 -- -- -0.287 -- 64.84 333 -- --
21.49 0.216 13.3 -- 0.581 -0.594 -- -- -0.333 4.74 93.66 172 -- --
31.75 0.263 13.3 -0.356 -- -- -- -- -0.306 -- -- -- -- --
24.85 0.233 13.3 -- 0.438 -- -- -- -0.276 4.61 -- -- -- --
30.13 0.256 13.3 -- -- 0.367 -- -- -0.253 -- 60.09 334 -- --
35.09 0.276 13.3 -- -- -- -- -- -0.267 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 17.44 atmosphere 1000.0 90 > th dose independent rect. 14 17
6 17.55 atmosphere 1000.0 10 > th dose independent rect. 14 18
7 17.55 atmosphere 995.0 10 > th dose dependent rect. 12 11
8 17.57 atmosphere 995.0 270 > th dose dependent rect. 11 9
14 17.64 atmosphere 1000.0 10 > th dose independent rect. 12 20
26 17.82 atmosphere 995.0 10 > th dose dependent rect. 14 9
27 17.83 atmosphere 1000.0 10 > th dose independent rect. 16 16
32 17.86 atmosphere 1000.0 10 > th dose independent rect. 12 11
72 18.11 atmosphere 1000.0 270 > th dose independent rect. 1 16
78 18.14 temperature 25.0 270 < th dose independent rect. 1 4
79 18.14 atmosphere 1000.0 10 > th dose independent rect. 14 9
83 18.14 atmosphere 995.0 90 > th dose dependent rect. 14 17
84 18.15 temperature 25.0 270 < th dose independent rect. 24 6
86 18.16 atmosphere 995.0 10 > th dose dependent rect. 14 17
90 18.17 humidity 90.0 270 > th dose dependent rect. 23 7
95 18.19 atmosphere 1000.0 270 > th dose independent rect. 11 9
104 18.22 atmosphere 1000.0 270 > th dose independent rect. 1 5
105 18.22 atmosphere 1000.0 90 > th dose independent rect. 3 15
116 18.24 humidity 90.0 270 > th dose dependent rect. 1 4
118 18.25 radiation 30.0 90 < th dose independent rect. 15 16
139 18.31 wind 5.0 270 < th dose independent rect. 6 8
141 18.31 atmosphere 995.0 10 > th dose dependent rect. 12 20
144 18.32 radiation 40.0 270 < th dose independent rect. 13 17
153 18.34 precipitation 0.1 270 < th dose independent rect. 17 8
160 18.34 precipitation 0.1 270 < th dose dependent rect. 17 8
162 18.35 wind 9.0 270 < th dose independent rect. 6 7
177 18.37 temperature 10.0 270 > th dose independent rect. 6 7
178 18.37 atmosphere 995.0 270 > th dose independent rect. 6 7
179 18.37 atmosphere 1015.0 270 < th dose independent rect. 6 7
182 18.37 temperature 10.0 270 > th dose independent rect. 13 17
188 18.38 precipitation 0.1 270 < th dose independent rect. 6 7
193 18.38 precipitation 0.1 270 < th dose dependent rect. 6 7
196 18.39 humidity 90.0 270 > th dose independent rect. 1 4
203 18.40 temperature 10.0 90 > th dose independent rect. 15 16
215 18.41 humidity 90.0 270 > th dose dependent rect. 17 13
216 18.41 humidity 90.0 270 > th dose dependent rect. 12 18
217 18.42 wind 1.0 90 > th dose independent rect. 7 8
218 18.42 wind 1.0 30 > th dose independent rect. 23 15
224 18.43 radiation 1.0 90 > th dose independent rect. 7 8
233 18.43 radiation 40.0 90 < th dose dependent rect. 15 16
238 18.44 wind 7.0 270 < th dose independent rect. 17 8
244 18.44 atmosphere 1000.0 10 > th dose independent rect. 4 15
245 18.44 temperature 15.0 270 > th dose independent rect. 1 16
253 18.44 temperature 10.0 90 > th dose dependent rect. 7 20
289 18.47 temperature 20.0 270 > th dose independent rect. 6 19
291 18.48 humidity 50.0 270 > th dose independent rect. 6 7
292 18.48 humidity 90.0 270 > th dose independent rect. 23 7
298 18.48 wind 9.0 270 < th dose independent rect. 13 17
299 18.48 precipitation 0.1 270 < th dose independent rect. 6 19
301 18.48 wind 9.0 270 < th dose dependent rect. 6 8
307 18.48 precipitation 0.1 270 < th dose dependent rect. 6 19
343 18.51 radiation 1.0 270 > th dose independent rect. 17 21
353 18.52 temperature 10.0 270 > th dose independent rect. 17 8
354 18.52 radiation 20.0 270 < th dose independent rect. 17 8
360 18.52 wind 9.0 90 < th dose independent rect. 15 16
362 18.52 atmosphere 1015.0 270 < th dose independent rect. 1 16
364 18.52 wind 7.0 270 < th dose independent rect. 6 19
379 18.53 radiation 40.0 10 < th dose independent rect. 14 17
397 18.54 radiation 40.0 90 < th dose dependent rect. 13 18
406 18.55 humidity 50.0 270 > th dose independent rect. 13 17
413 18.56 wind 9.0 10 < th dose independent rect. 7 7
417 18.56 wind 1.0 10 > th dose independent rect. 14 9
423 18.56 wind 7.0 270 < th dose independent rect. 19 16
425 18.56 precipitation 0.1 270 < th dose independent rect. 1 16
433 18.56 precipitation 0.1 270 < th dose dependent rect. 1 16
459 18.58 temperature 10.0 10 > th dose independent rect. 7 7
461 18.58 atmosphere 995.0 10 > th dose independent rect. 7 7
463 18.58 atmosphere 1015.0 10 < th dose independent rect. 7 7
464 18.58 precipitation 0.1 10 < th dose independent rect. 7 7
466 18.58 wind 1.0 270 > th dose independent rect. 17 8
467 18.58 humidity 50.0 270 > th dose independent rect. 17 8
472 18.58 temperature 10.0 10 > th dose independent rect. 14 17
473 18.58 radiation 20.0 10 < th dose independent rect. 14 17
478 18.58 precipitation 0.1 10 < th dose dependent rect. 7 7
482 18.58 radiation 40.0 10 < th dose dependent rect. 14 17
488 18.59 temperature 10.0 1440 > th dose independent rect. 8 7
500 18.59 temperature 10.0 1440 > th dose independent rect. 15 17
506 18.59 radiation 40.0 270 < th dose dependent rect. 17 8
516 18.60 radiation 1.0 10 > th dose independent rect. 7 7
524 18.60 precipitation 0.1 270 < th dose independent rect. 19 16
527 18.60 precipitation 0.1 270 < th dose dependent rect. 19 16
541 18.61 humidity 90.0 270 > th dose dependent rect. 3 1
545 18.61 temperature 10.0 30 > th dose dependent rect. 23 15
549 18.61 temperature 10.0 90 > th dose dependent rect. 7 18
555 18.62 wind 7.0 10 < th dose independent rect. 7 9
563 18.62 temperature 30.0 270 < th dose independent rect. 1 16
581 18.63 radiation 1.0 270 > th dose independent sin 3 NA
604 18.64 temperature 15.0 270 > th dose independent rect. 11 9
631 18.65 temperature 10.0 90 > th dose dependent rect. 7 8
664 18.67 atmosphere 1000.0 10 > th dose independent rect. 1 7
670 18.67 atmosphere 1015.0 270 < th dose independent rect. 11 9
673 18.67 temperature 10.0 270 > th dose independent rect. 20 15
674 18.67 humidity 50.0 270 > th dose independent rect. 20 15
677 18.67 atmosphere 995.0 270 > th dose independent rect. 20 15
725 18.69 radiation 40.0 30 < th dose independent rect. 12 11
731 18.69 wind 9.0 270 < th dose independent rect. 1 16
734 18.69 atmosphere 1000.0 30 > th dose independent rect. 1 22
735 18.69 humidity 90.0 270 > th dose dependent sin 10 NA
742 18.70 wind 9.0 270 < th dose independent rect. 1 5
743 18.70 temperature 10.0 270 > th dose independent rect. 1 5
746 18.70 humidity 50.0 270 > th dose independent rect. 1 5
750 18.70 atmosphere 1015.0 270 < th dose independent rect. 1 5
751 18.70 radiation 20.0 270 < th dose independent rect. 1 5
754 18.70 precipitation 0.1 270 < th dose independent rect. 1 5
761 18.70 temperature 10.0 10 > th dose independent rect. 7 9
763 18.70 atmosphere 1015.0 10 < th dose independent rect. 7 9
765 18.70 precipitation 0.1 10 < th dose independent rect. 7 9
768 18.70 temperature 10.0 10 > th dose independent rect. 16 15
773 18.70 precipitation 0.1 270 < th dose independent rect. 13 17
774 18.70 wind 5.0 270 < th dose independent rect. 19 18
778 18.70 temperature 10.0 270 > th dose independent rect. 6 19
780 18.70 precipitation 0.1 270 < th dose dependent rect. 1 5
783 18.70 precipitation 0.1 10 < th dose dependent rect. 7 9
784 18.70 precipitation 0.1 270 < th dose dependent rect. 13 17
785 18.70 temperature 10.0 10 > th dose dependent rect. 8 19
795 18.71 radiation 1.0 10 > th dose independent rect. 7 9
796 18.71 wind 1.0 10 > th dose independent rect. 12 11
800 18.71 wind 7.0 10 < th dose independent rect. 23 15
802 18.71 humidity 50.0 270 > th dose independent rect. 1 16
803 18.71 precipitation 0.1 90 < th dose independent rect. 15 16
813 18.71 radiation 30.0 270 < th dose dependent rect. 1 5
821 18.71 precipitation 0.1 90 < th dose dependent rect. 15 16
823 18.71 temperature 10.0 10 > th dose dependent rect. 7 21
824 18.72 temperature 25.0 270 < th dose independent rect. 3 1
831 18.72 wind 1.0 10 > th dose independent rect. 7 9
852 18.72 wind 1.0 270 > th dose independent rect. 6 19
863 18.72 temperature 10.0 10 > th dose dependent rect. 7 9
866 18.72 wind 9.0 90 < th dose dependent rect. 7 20
913 18.74 temperature 30.0 90 < th dose independent rect. 14 17
921 18.74 wind 9.0 270 < th dose dependent rect. 17 8