Os05g0403000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase aspartic, catalytic domain containing protein.
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Os05g0403000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase aspartic, catalytic domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 303.81 | 0.819 | 3.43 | -1.62 | 0.0957 | 4.22 | 0.797 | -20.5 | -0.00716 | 7.56 | 999.8 | 60 | -- | -- |
| 310.09 | 0.826 | 3.19 | -0.273 | 0.0784 | 0.564 | 0.812 | -- | -0.0084 | 6.99 | 999.8 | 60 | -- | -- |
| 305.4 | 0.814 | 3.43 | -1.59 | 0.102 | 4.26 | -- | -20.7 | -0.0074 | 9.37 | 999.8 | 60 | -- | -- |
| 305.6 | 0.814 | 3.18 | -0.201 | 0.0849 | 0.536 | -- | -- | 0.0339 | 6.82 | 1003 | 71 | -- | -- |
| 304.58 | 0.817 | 3.42 | -1.54 | -- | 4.88 | -- | -23.9 | -0.0103 | -- | 999.2 | 17 | -- | -- |
| 318.82 | 0.837 | 3.2 | -0.173 | 0.0791 | -- | 0.788 | -- | -0.0465 | 7.26 | -- | -- | -- | -- |
| 320.38 | 0.838 | 3.2 | -0.155 | 0.0883 | -- | -- | -- | -0.0472 | 9.14 | -- | -- | -- | -- |
| 306.04 | 0.815 | 3.18 | -0.177 | -- | 0.544 | -- | -- | 0.0497 | -- | 1003 | 71 | -- | -- |
| 306.29 | 0.815 | 3.17 | -- | 0.1 | 0.54 | -- | -- | 0.0755 | 7.7 | 1003 | 118 | -- | -- |
| 320.83 | 0.837 | 3.2 | -0.155 | -- | -- | -- | -- | -0.0467 | -- | -- | -- | -- | -- |
| 321.01 | 0.838 | 3.19 | -- | 0.0882 | -- | -- | -- | -0.0299 | 9.28 | -- | -- | -- | -- |
| 306.78 | 0.816 | 3.17 | -- | -- | 0.539 | -- | -- | 0.0701 | -- | 1003 | 118 | -- | -- |
| 321.46 | 0.837 | 3.2 | -- | -- | -- | -- | -- | -0.0295 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 294.38 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 3 | 13 |
| 5 | 296.15 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 36 | 298.73 | atmosphere | 1000 | 90 | < th | dose independent | sin | 3 | NA |
| 37 | 298.78 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 21 | 19 |
| 41 | 299.07 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 23 | 17 |
| 43 | 299.20 | atmosphere | 1000 | 90 | > th | dose independent | sin | 4 | NA |
| 54 | 299.96 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 3 | 11 |
| 64 | 300.24 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 3 | 1 |
| 65 | 300.24 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 2 | 3 |
| 102 | 301.01 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 2 | 21 |
| 105 | 301.04 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 4 | 7 |
| 123 | 301.25 | atmosphere | 1000 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 173 | 301.77 | atmosphere | 1005 | 270 | < th | dose dependent | sin | 5 | NA |
| 255 | 302.42 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 21 | 9 |
| 288 | 302.65 | atmosphere | 1000 | 90 | > th | dose independent | sin | 1 | NA |
| 320 | 302.83 | radiation | 30 | 10 | > th | dose independent | rect. | 15 | 18 |
| 335 | 302.91 | temperature | 30 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 424 | 303.33 | atmosphere | 1005 | 720 | < th | dose dependent | rect. | 23 | 8 |
| 438 | 303.40 | atmosphere | 1005 | 720 | < th | dose dependent | rect. | 21 | 12 |
| 441 | 303.41 | atmosphere | 1005 | 720 | < th | dose dependent | rect. | 20 | 14 |
| 471 | 303.51 | atmosphere | 1000 | 720 | < th | dose dependent | rect. | 5 | 1 |
| 512 | 303.64 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 8 | 22 |
| 515 | 303.65 | temperature | 30 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 621 | 303.97 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 9 | 23 |
| 647 | 304.04 | atmosphere | 1000 | 90 | < th | dose independent | no | NA | NA |
| 713 | 304.23 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 3 | 19 |
| 718 | 304.25 | atmosphere | 1000 | 90 | > th | dose independent | no | NA | NA |
| 732 | 304.30 | temperature | 30 | 14400 | < th | dose independent | rect. | 20 | 13 |
| 765 | 304.39 | temperature | 30 | 14400 | < th | dose independent | rect. | 4 | 5 |
| 771 | 304.41 | temperature | 30 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 786 | 304.43 | temperature | 30 | 14400 | < th | dose independent | rect. | 22 | 11 |
| 828 | 304.52 | wind | 9 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 848 | 304.55 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 863 | 304.57 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 18 | 23 |
| 879 | 304.60 | humidity | 80 | 14400 | < th | dose independent | rect. | 21 | 17 |
| 904 | 304.66 | atmosphere | 1000 | 30 | < th | dose independent | rect. | 15 | 23 |
| 918 | 304.68 | atmosphere | 1000 | 30 | < th | dose independent | rect. | 5 | 23 |
| 922 | 304.69 | humidity | 80 | 14400 | > th | dose independent | rect. | 21 | 17 |
| 926 | 304.70 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 19 | 10 |
| 940 | 304.72 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 7 | 23 |
| 942 | 304.72 | atmosphere | 1000 | 30 | < th | dose independent | rect. | 13 | 23 |
| 955 | 304.75 | wind | 5 | 4320 | > th | dose independent | rect. | 14 | 2 |
| 971 | 304.77 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 3 | 13 |
| 985 | 304.80 | wind | 5 | 4320 | < th | dose independent | rect. | 14 | 1 |