Os05g0402700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC 4.1.2.13).
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Os05g0402700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC 4.1.2.13).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.84 | 0.209 | 13.7 | 0.161 | 0.544 | -0.609 | -0.694 | 0.776 | 0.116 | 0.668 | 19.67 | 351 | -- | -- |
| 20.38 | 0.21 | 13.7 | 0.0778 | 0.562 | -0.594 | -0.796 | -- | 0.1 | 0.723 | 18.17 | 398 | -- | -- |
| 21.6 | 0.216 | 13.7 | 0.26 | 0.477 | -0.631 | -- | 1.26 | 0.131 | 1.11 | 18.01 | 177 | -- | -- |
| 22.57 | 0.221 | 13.7 | 0.0456 | 0.57 | -0.586 | -- | -- | 0.0782 | 0.783 | 17.58 | 389 | -- | -- |
| 30.81 | 0.26 | 13.7 | 0.355 | -- | -1.05 | -- | 1.37 | 0.214 | -- | 18.01 | 177 | -- | -- |
| 25.66 | 0.237 | 13.7 | -0.121 | 0.652 | -- | -0.721 | -- | -0.0266 | 1.84 | -- | -- | -- | -- |
| 27.68 | 0.246 | 13.7 | -0.0982 | 0.652 | -- | -- | -- | -0.0226 | 1.91 | -- | -- | -- | -- |
| 32.7 | 0.266 | 13.7 | 0.14 | -- | -1.04 | -- | -- | 0.154 | -- | 17.5 | 13 | -- | -- |
| 22.61 | 0.221 | 13.7 | -- | 0.562 | -0.586 | -- | -- | 0.0695 | 0.839 | 17.2 | 368 | -- | -- |
| 53.37 | 0.341 | 13.7 | -0.0713 | -- | -- | -- | -- | -0.00753 | -- | -- | -- | -- | -- |
| 27.93 | 0.247 | 13.7 | -- | 0.651 | -- | -- | -- | -0.0117 | 1.91 | -- | -- | -- | -- |
| 33.17 | 0.268 | 13.7 | -- | -- | -0.994 | -- | -- | 0.136 | -- | 17.79 | 12 | -- | -- |
| 53.51 | 0.341 | 13.7 | -- | -- | -- | -- | -- | 0.000375 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.72 | temperature | 10 | 270 | > th | dose dependent | rect. | 20 | 22 |
| 10 | 19.11 | temperature | 20 | 270 | > th | dose dependent | rect. | 10 | 22 |
| 24 | 19.33 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 17 |
| 51 | 19.59 | temperature | 15 | 90 | > th | dose dependent | rect. | 2 | 17 |
| 91 | 19.79 | temperature | 15 | 270 | > th | dose dependent | sin | 21 | NA |
| 95 | 19.81 | temperature | 15 | 90 | > th | dose dependent | sin | 19 | NA |
| 105 | 19.83 | temperature | 15 | 270 | > th | dose dependent | rect. | 9 | 9 |
| 142 | 19.95 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 227 | 20.14 | temperature | 20 | 10 | > th | dose dependent | rect. | 14 | 15 |
| 275 | 20.26 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 312 | 20.33 | temperature | 30 | 30 | < th | dose dependent | sin | 18 | NA |
| 425 | 20.50 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 12 |
| 461 | 20.57 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 14 |
| 493 | 20.62 | temperature | 20 | 270 | > th | dose dependent | rect. | 14 | 2 |
| 545 | 20.67 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 16 |
| 557 | 20.68 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 14 |
| 610 | 20.72 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 647 | 20.75 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 686 | 20.79 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 18 |
| 695 | 20.79 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 737 | 20.82 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 22 |
| 829 | 20.87 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 23 |
| 852 | 20.89 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 869 | 20.90 | temperature | 25 | 270 | > th | dose independent | rect. | 12 | 6 |
| 905 | 20.91 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 20 |
| 933 | 20.93 | temperature | 20 | 10 | > th | dose dependent | rect. | 14 | 6 |
| 981 | 20.95 | temperature | 25 | 1440 | < th | dose independent | rect. | 14 | 9 |