Os05g0401200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0401200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56.5 | 0.353 | 14.6 | -0.712 | 0.901 | 0.756 | -0.15 | -1.81 | -0.289 | 0.776 | 0.9834 | 775 | -- | -- |
| 60.94 | 0.366 | 14.5 | -0.598 | 0.804 | -0.156 | -0.496 | -- | -0.246 | 22.1 | 0.3504 | 763 | -- | -- |
| 56.59 | 0.35 | 14.6 | -0.706 | 0.9 | 0.76 | -- | -1.79 | -0.287 | 0.779 | 0.9941 | 777 | -- | -- |
| 60.92 | 0.364 | 14.6 | -0.673 | 0.906 | 0.722 | -- | -- | -0.282 | 0.772 | 0.1697 | 752 | -- | -- |
| 73.55 | 0.399 | 14.5 | -0.704 | -- | 1.36 | -- | -1.61 | -0.235 | -- | 1.425 | 1121 | -- | -- |
| 61.49 | 0.368 | 14.6 | -0.605 | 0.977 | -- | -0.428 | -- | -0.248 | 22.4 | -- | -- | -- | -- |
| 62.21 | 0.369 | 14.6 | -0.589 | 0.978 | -- | -- | -- | -0.247 | 22.5 | -- | -- | -- | -- |
| 73.5 | 0.399 | 14.5 | -0.788 | -- | 1.48 | -- | -- | -0.278 | -- | 0.16 | 1142 | -- | -- |
| 70.72 | 0.394 | 14.5 | -- | 0.8 | -0.158 | -- | -- | -0.183 | 22.2 | 0.1697 | 752 | -- | -- |
| 120.91 | 0.514 | 14.5 | -0.572 | -- | -- | -- | -- | -0.243 | -- | -- | -- | -- | -- |
| 71.35 | 0.395 | 14.5 | -- | 0.974 | -- | -- | -- | -0.181 | 22.5 | -- | -- | -- | -- |
| 82.94 | 0.426 | 14.5 | -- | -- | -0.646 | -- | -- | -0.191 | -- | 0.1697 | 752 | -- | -- |
| 129.53 | 0.531 | 14.5 | -- | -- | -- | -- | -- | -0.18 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.00 | radiation | 10.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 27 | 49.00 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 55 | 50.79 | wind | 3.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 59 | 51.16 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 60 | 51.28 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 62 | 51.75 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 65 | 52.18 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 6 |
| 80 | 52.81 | wind | 3.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 87 | 53.00 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 91 | 53.14 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 97 | 53.38 | humidity | 80.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 102 | 53.47 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 104 | 53.47 | temperature | 30.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 105 | 53.47 | humidity | 50.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 109 | 53.47 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 110 | 53.47 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 111 | 53.47 | radiation | 20.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 114 | 53.47 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 1 |
| 115 | 53.47 | temperature | 10.0 | 10 | > th | dose independent | rect. | 7 | 23 |
| 116 | 53.47 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 138 | 53.52 | wind | 1.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 141 | 53.60 | temperature | 30.0 | 90 | < th | dose independent | rect. | 7 | 12 |
| 142 | 53.62 | humidity | 90.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 144 | 53.63 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 3 | 4 |
| 145 | 53.64 | wind | 9.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 146 | 53.64 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 150 | 53.64 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 154 | 53.64 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 159 | 53.64 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 160 | 53.64 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 161 | 53.64 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 166 | 53.65 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 4 | 3 |
| 180 | 53.93 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 184 | 53.98 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 7 | 23 |
| 202 | 54.20 | temperature | 30.0 | 720 | < th | dose independent | rect. | 7 | 3 |
| 211 | 54.30 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 7 | 23 |
| 213 | 54.30 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 214 | 54.35 | temperature | 30.0 | 90 | < th | dose independent | rect. | 7 | 22 |
| 220 | 54.38 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 19 | 12 |
| 235 | 54.56 | temperature | 30.0 | 720 | < th | dose independent | rect. | 19 | 18 |
| 239 | 54.63 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 19 | 10 |
| 241 | 54.64 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 19 | 12 |
| 248 | 54.72 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 19 | 12 |
| 268 | 54.81 | humidity | 50.0 | 30 | > th | dose independent | rect. | 7 | 23 |
| 280 | 54.92 | temperature | 30.0 | 720 | < th | dose independent | rect. | 5 | 6 |
| 282 | 54.93 | humidity | 50.0 | 90 | > th | dose independent | rect. | 7 | 12 |
| 295 | 54.97 | wind | 9.0 | 30 | < th | dose independent | rect. | 7 | 23 |
| 301 | 55.03 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 19 | 2 |
| 305 | 55.04 | temperature | 30.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 315 | 55.10 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 23 | 6 |
| 317 | 55.11 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 17 | 14 |
| 318 | 55.12 | radiation | 1.0 | 720 | > th | dose independent | rect. | 7 | 10 |
| 328 | 55.18 | wind | 1.0 | 30 | > th | dose independent | rect. | 7 | 21 |
| 342 | 55.27 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 17 | 14 |
| 348 | 55.31 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 7 | 12 |
| 360 | 55.35 | wind | 1.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 362 | 55.35 | radiation | 1.0 | 90 | > th | dose independent | rect. | 7 | 22 |
| 367 | 55.37 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 378 | 55.41 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 379 | 55.42 | radiation | 1.0 | 90 | > th | dose independent | rect. | 7 | 11 |
| 408 | 55.52 | temperature | 30.0 | 720 | < th | dose independent | sin | 8 | NA |
| 416 | 55.53 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 19 | 10 |
| 419 | 55.54 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 12 |
| 427 | 55.57 | temperature | 10.0 | 90 | > th | dose independent | rect. | 7 | 12 |
| 428 | 55.57 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 12 |
| 429 | 55.57 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 12 |
| 430 | 55.57 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 12 |
| 433 | 55.57 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 7 | 12 |
| 434 | 55.57 | radiation | 30.0 | 90 | < th | dose independent | rect. | 19 | 12 |
| 436 | 55.58 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 12 |
| 440 | 55.58 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 12 |
| 441 | 55.59 | wind | 9.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 442 | 55.59 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 445 | 55.59 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 449 | 55.59 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 454 | 55.59 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 455 | 55.59 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 457 | 55.59 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 21 |
| 460 | 55.59 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 466 | 55.60 | wind | 9.0 | 90 | < th | dose dependent | rect. | 19 | 12 |
| 472 | 55.62 | temperature | 30.0 | 270 | < th | dose independent | rect. | 20 | 21 |
| 479 | 55.64 | wind | 1.0 | 30 | > th | dose independent | rect. | 7 | 23 |
| 482 | 55.65 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 12 |
| 483 | 55.65 | temperature | 30.0 | 720 | < th | dose independent | rect. | 22 | 14 |
| 485 | 55.65 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 12 |
| 498 | 55.69 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 7 | 10 |
| 499 | 55.69 | wind | 9.0 | 90 | < th | dose independent | rect. | 7 | 12 |
| 501 | 55.69 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 7 | 10 |
| 512 | 55.74 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 16 |
| 517 | 55.75 | radiation | 30.0 | 720 | < th | dose independent | rect. | 17 | 14 |
| 518 | 55.75 | humidity | 80.0 | 270 | > th | dose dependent | sin | 10 | NA |
| 523 | 55.76 | temperature | 10.0 | 720 | > th | dose independent | rect. | 7 | 10 |
| 524 | 55.76 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 7 | 10 |
| 525 | 55.76 | temperature | 10.0 | 720 | > th | dose independent | rect. | 17 | 14 |
| 549 | 55.80 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 19 | 2 |
| 550 | 55.80 | wind | 9.0 | 720 | < th | dose independent | rect. | 19 | 10 |
| 551 | 55.80 | temperature | 30.0 | 270 | < th | dose independent | rect. | 14 | 11 |
| 563 | 55.80 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 576 | 55.82 | temperature | 10.0 | 720 | > th | dose independent | rect. | 19 | 10 |
| 577 | 55.82 | temperature | 30.0 | 720 | < th | dose independent | rect. | 19 | 10 |
| 578 | 55.82 | humidity | 50.0 | 720 | > th | dose independent | rect. | 19 | 10 |
| 579 | 55.82 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 19 | 10 |
| 580 | 55.82 | radiation | 1.0 | 720 | < th | dose independent | rect. | 19 | 10 |
| 581 | 55.82 | radiation | 20.0 | 720 | < th | dose independent | rect. | 19 | 10 |
| 584 | 55.82 | temperature | 10.0 | 720 | > th | dose independent | rect. | 5 | 14 |
| 585 | 55.82 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 5 | 14 |
| 590 | 55.83 | humidity | 50.0 | 90 | > th | dose independent | rect. | 7 | 21 |
| 593 | 55.83 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 9 | 22 |
| 595 | 55.83 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 23 | 6 |
| 599 | 55.84 | wind | 1.0 | 720 | > th | dose independent | rect. | 19 | 2 |
| 602 | 55.84 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 17 | 14 |
| 620 | 55.85 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 8 | 5 |
| 625 | 55.86 | humidity | 80.0 | 10 | > th | dose independent | rect. | 4 | 3 |
| 627 | 55.86 | humidity | 50.0 | 90 | > th | dose independent | rect. | 7 | 10 |
| 639 | 55.88 | wind | 1.0 | 720 | > th | dose independent | rect. | 7 | 2 |
| 642 | 55.88 | wind | 9.0 | 720 | < th | dose independent | rect. | 17 | 14 |
| 650 | 55.90 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 5 | 14 |
| 654 | 55.90 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 5 | 14 |
| 655 | 55.91 | wind | 9.0 | 720 | < th | dose independent | rect. | 19 | 2 |
| 659 | 55.92 | temperature | 10.0 | 720 | > th | dose independent | rect. | 19 | 2 |
| 660 | 55.92 | temperature | 30.0 | 720 | < th | dose independent | rect. | 19 | 2 |
| 661 | 55.92 | humidity | 50.0 | 720 | > th | dose independent | rect. | 19 | 2 |
| 663 | 55.92 | radiation | 1.0 | 720 | < th | dose independent | rect. | 19 | 2 |
| 670 | 55.92 | temperature | 10.0 | 720 | > th | dose independent | rect. | 21 | 22 |
| 671 | 55.92 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 21 | 22 |
| 672 | 55.92 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 681 | 55.92 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 21 | 22 |
| 695 | 55.94 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 23 | 6 |
| 699 | 55.95 | radiation | 30.0 | 720 | < th | dose independent | rect. | 16 | 17 |
| 705 | 55.96 | humidity | 90.0 | 270 | > th | dose independent | rect. | 21 | 9 |
| 708 | 55.96 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 11 | 2 |
| 719 | 55.97 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 7 | 2 |
| 724 | 55.97 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 7 | 2 |
| 738 | 55.99 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 3 |
| 740 | 55.99 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 7 | 18 |
| 741 | 55.99 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 9 | 22 |
| 744 | 55.99 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 7 | 18 |
| 745 | 55.99 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 9 | 22 |
| 778 | 56.05 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 22 |
| 788 | 56.06 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 789 | 56.06 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 22 | 14 |
| 804 | 56.07 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 13 | 18 |
| 805 | 56.07 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 11 | 19 |
| 807 | 56.08 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 21 | 8 |
| 815 | 56.09 | wind | 1.0 | 90 | > th | dose independent | rect. | 7 | 12 |
| 819 | 56.09 | atmosphere | 995.0 | 720 | > th | dose dependent | rect. | 19 | 1 |
| 826 | 56.10 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 829 | 56.10 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 7 | 21 |
| 832 | 56.10 | wind | 7.0 | 30 | < th | dose dependent | rect. | 4 | 3 |
| 841 | 56.10 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 7 | 21 |
| 844 | 56.11 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 7 | 21 |
| 858 | 56.12 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 1 | 6 |
| 864 | 56.13 | radiation | 1.0 | 720 | < th | dose independent | rect. | 14 | 8 |
| 866 | 56.13 | temperature | 15.0 | 30 | > th | dose independent | rect. | 7 | 21 |
| 876 | 56.14 | humidity | 90.0 | 30 | < th | dose independent | rect. | 4 | 3 |
| 879 | 56.14 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 7 | 10 |
| 899 | 56.15 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 18 |
| 905 | 56.16 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 14 | 9 |
| 913 | 56.17 | humidity | 90.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 914 | 56.17 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 3 |
| 917 | 56.17 | humidity | 50.0 | 270 | > th | dose independent | rect. | 14 | 12 |
| 920 | 56.17 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 3 |
| 924 | 56.17 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 13 | 16 |
| 929 | 56.18 | wind | 9.0 | 30 | < th | dose independent | rect. | 4 | 3 |
| 930 | 56.18 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 3 |
| 932 | 56.18 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 3 |
| 933 | 56.18 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 3 |
| 937 | 56.18 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 3 |
| 960 | 56.19 | wind | 9.0 | 90 | < th | dose dependent | rect. | 17 | 14 |