Os05g0400400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ubiquinol-cytochrome c reductase complex 8.0 kDa protein (EC 1.10.2.2).
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Os05g0400400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ubiquinol-cytochrome c reductase complex 8.0 kDa protein (EC 1.10.2.2).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 79.89 | 0.42 | 12.4 | 0.252 | 0.436 | -1.5 | -0.0247 | 15.6 | -0.172 | 7.52 | 30.6 | 19 | -- | -- |
| 99.82 | 0.469 | 12.5 | -0.752 | 0.431 | 0.411 | -0.00558 | -- | -0.154 | 7.18 | 32.1 | 2 | -- | -- |
| 79.89 | 0.416 | 12.4 | 0.251 | 0.436 | -1.5 | -- | 15.6 | -0.172 | 7.52 | 30.6 | 18 | -- | -- |
| 99.36 | 0.464 | 12.5 | -0.756 | 0.451 | 0.44 | -- | -- | -0.15 | 7.14 | 32 | 65 | -- | -- |
| 89.71 | 0.444 | 12.4 | 0.197 | -- | -1.53 | -- | 15.2 | -0.17 | -- | 30.6 | 18 | -- | -- |
| 102.25 | 0.474 | 12.5 | -0.726 | 0.403 | -- | -0.0291 | -- | -0.169 | 7.55 | -- | -- | -- | -- |
| 102.25 | 0.474 | 12.5 | -0.727 | 0.402 | -- | -- | -- | -0.169 | 7.56 | -- | -- | -- | -- |
| 109.47 | 0.489 | 12.5 | -0.738 | -- | 0.31 | -- | -- | -0.151 | -- | 32 | 65 | -- | -- |
| 114.37 | 0.498 | 12.5 | -- | 0.43 | 0.342 | -- | -- | -0.0683 | 7.33 | 32.07 | 61 | -- | -- |
| 110.93 | 0.492 | 12.5 | -0.721 | -- | -- | -- | -- | -0.163 | -- | -- | -- | -- | -- |
| 116.16 | 0.504 | 12.5 | -- | 0.397 | -- | -- | -- | -0.088 | 7.68 | -- | -- | -- | -- |
| 123.77 | 0.52 | 12.5 | -- | -- | 0.238 | -- | -- | -0.0722 | -- | 32 | 65 | -- | -- |
| 124.63 | 0.521 | 12.5 | -- | -- | -- | -- | -- | -0.0828 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 82.72 | temperature | 30 | 10 | > th | dose dependent | rect. | 9 | 3 |
| 19 | 82.91 | temperature | 30 | 90 | > th | dose independent | rect. | 11 | 1 |
| 20 | 83.27 | temperature | 30 | 10 | > th | dose independent | rect. | 18 | 18 |
| 21 | 83.31 | temperature | 30 | 10 | > th | dose independent | rect. | 9 | 3 |
| 36 | 83.37 | temperature | 30 | 10 | > th | dose dependent | rect. | 16 | 20 |
| 69 | 83.47 | temperature | 30 | 10 | > th | dose dependent | sin | 7 | NA |
| 75 | 83.64 | temperature | 30 | 10 | > th | dose independent | rect. | 16 | 20 |
| 84 | 83.91 | temperature | 30 | 10 | > th | dose independent | rect. | 14 | 22 |
| 171 | 85.58 | temperature | 30 | 30 | > th | dose independent | sin | 7 | NA |
| 205 | 86.66 | temperature | 30 | 10 | > th | dose dependent | rect. | 14 | 23 |
| 403 | 88.89 | temperature | 30 | 10 | > th | dose dependent | no | NA | NA |
| 509 | 88.92 | temperature | 30 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 640 | 90.01 | temperature | 30 | 30 | < th | dose independent | sin | 5 | NA |
| 647 | 90.18 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 782 | 90.50 | temperature | 30 | 30 | > th | dose independent | rect. | 9 | 9 |
| 811 | 90.62 | temperature | 30 | 30 | > th | dose independent | no | NA | NA |
| 912 | 90.62 | temperature | 30 | 30 | > th | dose independent | rect. | 11 | 23 |